CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004388.1-P	Field mustard	cytosol	79.36	91.65
CDY40933	Canola	cytosol	56.91	84.12
CDY40934	Canola	nucleus	33.72	73.21
HORVU4Hr1G017920.1	Barley	cytosol	5.85	67.9
Os11t0109200-00	Rice	plastid	11.28	63.47
TraesCS6A01G124200.1	Wheat	peroxisome	14.26	62.62
CDX69571	Canola	nucleus	34.79	58.81
CDY09872	Canola	nucleus	34.68	58.63
TraesCSU01G224900.1	Wheat	peroxisome	23.19	58.13
CDX91035	Canola	cytosol	33.19	56.22
AT5G15380.1	Thale cress	cytoskeleton, cytosol, nucleus	37.13	55.93
CDX85590	Canola	cytosol	32.77	55.2
CDX85589	Canola	nucleus	24.79	52.36
TraesCS3D01G454900.1	Wheat	peroxisome	24.89	51.88
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	25.11	51.87
Zm00001d044187_P001	Maize	cytosol	13.4	51.43
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	25.43	48.98
KRH69576	Soybean	nucleus	27.87	48.79
HORVU6Hr1G081790.1	Barley	nucleus	27.23	47.41
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	21.81	47.23
GSMUA_Achr8P33680_001	Banana	cytosol	24.89	45.97
Os03t0110800-01	Rice	nucleus	28.4	44.72
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	25.32	44.65
HORVU3Hr1G098970.1	Barley	nucleus	23.83	44.18
EER95283	Sorghum	nucleus	26.6	43.4
TraesCS6A01G338800.1	Wheat	nucleus	27.55	42.81
TraesCSU01G124200.1	Wheat	nucleus	27.23	42.45
TraesCSU01G140500.1	Wheat	nucleus	27.13	42.43
TraesCS5A01G241800.1	Wheat	nucleus	27.87	42.39
OQU93413	Sorghum	nucleus	27.34	42.34
TraesCS6D01G319500.2	Wheat	nucleus	27.23	42.31
EES00541	Sorghum	nucleus	27.34	42.27
TraesCS5D01G248300.1	Wheat	nucleus	27.77	42.23
Zm00001d048516_P001	Maize	nucleus	27.02	42.12
TraesCSU01G140600.1	Wheat	nucleus	27.45	41.61
TraesCS4A01G267400.1	Wheat	nucleus	18.83	41.36
TraesCS5A01G553300.3	Wheat	nucleus	26.81	41.31
GSMUA_Achr11P...	Banana	nucleus	20.11	41.0
TraesCS4B01G012300.2	Wheat	cytosol	13.62	40.25
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	24.57	39.69
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	24.36	39.62
TraesCS4D01G046800.1	Wheat	nucleus	25.32	39.6
HORVU4Hr1G089730.3	Barley	nucleus	15.0	39.5
Os12t0108900-00	Rice	cytosol, nucleus	14.89	39.33
GSMUA_Achr3P23940_001	Banana	nucleus	24.68	38.6
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	23.94	38.2
TraesCS3A01G461500.1	Wheat	nucleus	26.06	38.16
OQU87185	Sorghum	cytosol	9.57	38.14
Zm00001d027329_P002	Maize	nucleus	27.66	36.78
TraesCS3A01G067600.1	Wheat	nucleus	25.96	32.15
TraesCS6D01G114500.1	Wheat	mitochondrion	15.11	29.77
CDY13817	Canola	plastid	14.79	25.46
CDX82030	Canola	endoplasmic reticulum	14.89	24.91
CDX95858	Canola	cytosol	17.55	23.34
HORVU7Hr1G000490.1	Barley	cytosol	0.74	21.88
CDX92125	Canola	plasma membrane, vacuole	17.77	18.89

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	Gene3D:3.90.120.10	GO:A0A078E970
InterPro:C5_MeTfrase	EnsemblPlants:CDX95928	ProteinID:CDX95928	ProteinID:CDX95928.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00101940001	InterPro:IPR001525
InterPro:IPR015940	InterPro:IPR030380	InterPro:Methyltransf_11	PFAM:PF00145	PFAM:PF08241	PFscan:PS50030
PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934
SUPFAM:SSF53335	InterPro:UBA	InterPro:UBA-like_sf	UniParc:UPI0004EEB333	SEG:seg	:

Description

BnaA07g28030D

Coordinates

chrLK031892:-:127920..134106

Molecular Weight (calculated)

106799.0 Da

IEP (calculated)

6.888

GRAVY (calculated)

-0.388

Length

940 amino acids

Sequence
(BLAST)

001: MKFPLSSPFT SVALWSKVLT QRCISCSTGQ IGFEVIYHLR SVGVLMIGSS PQANIPAKHS AGDDDDVNWN TDDEIDNFQS SPRNILHMDE TVAKFIEMGF
101: SMEMIGRAIE ETGGENPEPM MILETLFKLS TSSEASSSKS KVIDELIGMG FSEELVIKAI QEHGEENLEE ITNALLSYAE AEKMHETENE DINNNYLSDD
201: NDDTNLYSGL SSSDEENELN SFRGDGRLQD LIKMGYPRKE ASIALERCGE IASLAEVVDF IFAAQMARQL DEFWAAPDEQ ERRINEPPPR RRRLNTDIAS
301: DDELIRLPNP MIGFGVPKEP GIITERPVPI PSIARGPPYF YYENVAMTPK GVWATMSSHL YDIKPEFVDS LYFCAAARKR GYIHNLPIKN RFEIQPTPHY
401: TIQEEFPLTK KWWPAWDKRT KLNCVLTCIA SAQLTNKIRK RLEKHERDPA VQKDVVDQCK KWNLVWVGKN KAAPLEPYEM ERLLGFPNNH TRGISRKDRY
501: KSLGNSFQVD TVAYHLSVLK PLYPKGINVL SLFTGIGGGE VALHRLQIPM KLVVSVEISE VNRNIFRSFW EQTNQRGDLI EFRDVEELDD HKIEGLMDQY
601: GGFDLVIGGS PCNNLAGANR VSRTGLEGDQ SSLFYDYCRI LEAVRSKASR MRSRRDRYKS LGNSFQVKLK ETMFLLRPRR LILLEFTPPL PLPSTDTTQL
701: LHNAFCSKSL VCTFRMFQEH IIRRGRRYIR RLNSCLLNST MQSYWDEIEN FKNKVFDKLT EKDKKVLEIG IGTGPNMRYF AARNVNVTLL GLDPNPKMKK
801: YARKAAVRAG LNPKNFRFMQ GVGEAIPLED GSVDAVVATL VLCTVSDVTQ TLNEIKRVLR PGGRFIFLEH VAAEDGSLFR RLQKLLDPLQ QILADGCHLT
901: RNTRECILEA GFSGGAQIET VSMYSFPWIT RPHIYGVAYK

Best Arabidopsis Sequence Match ( AT5G15380.1 )
(BLAST)

001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR

Arabidopsis Description

DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.