Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0109200-00 | Rice | plastid | 26.87 | 68.86 |
| TraesCS4D01G046800.1 | Wheat | nucleus | 89.72 | 63.89 |
| TraesCS4B01G047000.1 | Wheat | nucleus | 86.68 | 61.63 |
| PGSC0003DMT400040081 | Potato | mitochondrion | 24.77 | 51.46 |
| TraesCS6A01G124200.1 | Wheat | peroxisome | 25.7 | 51.4 |
| Os03t0110800-01 | Rice | nucleus | 60.51 | 43.38 |
| TraesCS5A01G241800.1 | Wheat | nucleus | 62.38 | 43.2 |
| TraesCS3A01G461300.1 | Wheat | cytosol, nucleus, peroxisome | 53.74 | 43.15 |
| TraesCS3A01G461200.1 | Wheat | cytosol, nucleus, peroxisome | 48.13 | 42.21 |
| TraesCS5A01G553300.3 | Wheat | nucleus | 60.05 | 42.13 |
| Zm00001d044187_P001 | Maize | cytosol | 23.6 | 41.22 |
| OQU93413 | Sorghum | nucleus | 57.94 | 40.86 |
| TraesCS6A01G338800.1 | Wheat | nucleus | 57.71 | 40.83 |
| EES00541 | Sorghum | nucleus | 56.78 | 39.97 |
| EER95283 | Sorghum | nucleus | 53.27 | 39.58 |
| Zm00001d048516_P001 | Maize | nucleus | 55.37 | 39.3 |
| TraesCS6A01G163300.1 | Wheat | cytosol, nucleus, peroxisome | 51.4 | 38.06 |
| TraesCS3A01G461500.1 | Wheat | nucleus | 55.61 | 37.07 |
| Bra023479.1-P | Field mustard | cytosol | 27.8 | 35.74 |
| Zm00001d027329_P002 | Maize | nucleus | 57.01 | 34.51 |
| CDX69571 | Canola | nucleus | 43.22 | 33.27 |
| CDY09872 | Canola | nucleus | 43.22 | 33.27 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 27.57 | 33.15 |
| Bra023480.1-P | Field mustard | cytosol | 34.11 | 32.81 |
| CDX85590 | Canola | cytosol | 42.76 | 32.8 |
| GSMUA_Achr11P... | Banana | nucleus | 35.28 | 32.75 |
| CDY40934 | Canola | nucleus | 32.94 | 32.56 |
| CDX91035 | Canola | cytosol | 41.59 | 32.07 |
| VIT_14s0066g01040.t01 | Wine grape | cytosol | 39.49 | 31.77 |
| CDX85589 | Canola | nucleus | 32.94 | 31.69 |
| Solyc02g062740.2.1 | Tomato | nucleus | 43.93 | 31.18 |
| Bra008749.1-P | Field mustard | nucleus | 43.69 | 31.11 |
| PGSC0003DMT400018502 | Potato | nucleus | 44.16 | 31.03 |
| KRG93258 | Soybean | nucleus | 42.06 | 31.03 |
| PGSC0003DMT400004867 | Potato | nucleus | 43.93 | 30.97 |
| KRH69576 | Soybean | nucleus | 38.78 | 30.91 |
| Solyc10g078190.1.1 | Tomato | nucleus | 43.93 | 30.87 |
| KRH56579 | Soybean | nucleus | 42.52 | 30.85 |
| Solyc04g005250.2.1 | Tomato | nucleus | 42.99 | 30.31 |
| AT5G14620.1 | Thale cress | nucleus | 43.69 | 29.87 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 35.28 | 29.67 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 42.76 | 29.33 |
| TraesCS3A01G067600.1 | Wheat | nucleus | 51.87 | 29.25 |
| OQU87185 | Sorghum | cytosol | 15.89 | 28.81 |
| CDY40933 | Canola | cytosol | 41.59 | 27.99 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 37.62 | 26.79 |
| Bra004388.1-P | Field mustard | cytosol | 41.36 | 21.74 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 22.66 | 19.4 |
| CDX95928 | Canola | golgi | 41.36 | 18.83 |
| TraesCS7A01G002900.3 | Wheat | plastid | 24.77 | 17.01 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 28.04 | 16.76 |
| KRG93790 | Soybean | cytosol | 3.04 | 13.54 |
Protein Annotations
| KEGG:00270+2.1.1.37 | Gene3D:3.40.50.150 | MapMan:50.2.1 | InterPro:C5_MeTfrase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001525 | InterPro:IPR030380 | PFAM:PF00145 | PFscan:PS51680 |
| PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS4A01G267400 |
| EnsemblPlants:TraesCS4A01G267400.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:579848008..579850633
Molecular Weight (calculated)
47511.1 Da
IEP (calculated)
5.398
GRAVY (calculated)
-0.477
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVSDLKDAD GMANGAAPSA SLIGMYVEMG FPKEMVLKAA KEIGERDESA LLSLLLAYTV FENDDSVGSC STSRRIPQRV EDEEEEEEEE DDWDDAVDAG
101: QREPYSDGSG DEGFLEEMSQ WDKQIKSLVD MGFPEDEENR FSSCVGRKKA RSTKDSKKRK RYGGGAHGSQ SPWDGGHEES ISLPKPMVGF GLPGDRPRSV
201: GRWLPAHSMR APFFYYENVA LATKGAWAEI SRCLYGIEPE FVDSKYFCAA LRKRGYTITS QLREGDHTRG TSKKKREKCL GNSFQVDTVA FHLSVLKDRF
301: PCGMNVLSLF SGIGGAEVAL HKLGIRMKTV VSVEICDASR SILRTWWDQT QEGTLIEFRD VQSLTHEKIA SLIRQLGGFD LVIGGSPCNN LAGSNRHHRV
401: GLEGDQSVLF RDYVRILNSV KSIMANVG
101: QREPYSDGSG DEGFLEEMSQ WDKQIKSLVD MGFPEDEENR FSSCVGRKKA RSTKDSKKRK RYGGGAHGSQ SPWDGGHEES ISLPKPMVGF GLPGDRPRSV
201: GRWLPAHSMR APFFYYENVA LATKGAWAEI SRCLYGIEPE FVDSKYFCAA LRKRGYTITS QLREGDHTRG TSKKKREKCL GNSFQVDTVA FHLSVLKDRF
301: PCGMNVLSLF SGIGGAEVAL HKLGIRMKTV VSVEICDASR SILRTWWDQT QEGTLIEFRD VQSLTHEKIA SLIRQLGGFD LVIGGSPCNN LAGSNRHHRV
401: GLEGDQSVLF RDYVRILNSV KSIMANVG
001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS
Arabidopsis Description
DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.