Factsheet for PGSC0003DMT400018502

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
extracellular 1
plastid 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g078190.1.1	Tomato	nucleus	95.4	95.4
PGSC0003DMT400040081	Potato	mitochondrion	29.72	87.86
PGSC0003DMT400004867	Potato	nucleus	69.95	70.18
HORVU4Hr1G017920.1	Barley	cytosol	9.2	69.14
Os11t0109200-00	Rice	plastid	18.55	67.66
TraesCS6A01G124200.1	Wheat	peroxisome	21.51	61.22
VIT_14s0066g01040.t01	Wine grape	cytosol	51.72	59.21
TraesCSU01G224900.1	Wheat	peroxisome	36.29	58.93
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	41.38	55.38
KRG93790	Soybean	cytosol	8.7	55.21
Zm00001d044187_P001	Maize	cytosol	21.84	54.29
TraesCS3D01G454900.1	Wheat	peroxisome	39.9	53.88
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	40.72	50.82
Os03t0110800-01	Rice	nucleus	48.28	49.25
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	34.81	48.85
HORVU6Hr1G081790.1	Barley	nucleus	43.02	48.52
EER95283	Sorghum	nucleus	45.32	47.92
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	41.22	47.09
Zm00001d048516_P001	Maize	nucleus	46.31	46.77
OQU93413	Sorghum	nucleus	45.81	45.96
TraesCS5A01G241800.1	Wheat	nucleus	46.63	45.95
TraesCSU01G124200.1	Wheat	nucleus	45.48	45.94
TraesCS5D01G248300.1	Wheat	nucleus	46.47	45.79
GSMUA_Achr8P33680_001	Banana	cytosol	38.26	45.78
EES00541	Sorghum	nucleus	45.48	45.56
TraesCS6A01G338800.1	Wheat	nucleus	44.83	45.12
HORVU3Hr1G098970.1	Barley	nucleus	37.44	44.97
TraesCS5A01G553300.3	Wheat	nucleus	44.83	44.75
TraesCS6D01G319500.2	Wheat	nucleus	44.17	44.46
TraesCSU01G140500.1	Wheat	nucleus	43.68	44.26
TraesCS4A01G267400.1	Wheat	nucleus	31.03	44.16
TraesCS4B01G012300.2	Wheat	cytosol	22.99	44.03
GSMUA_Achr11P...	Banana	nucleus	32.84	43.38
TraesCSU01G140600.1	Wheat	nucleus	43.84	43.06
TraesCS4D01G046800.1	Wheat	nucleus	42.36	42.93
HORVU4Hr1G089730.3	Barley	nucleus	24.79	42.3
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	39.41	41.52
GSMUA_Achr3P23940_001	Banana	nucleus	40.89	41.43
OQU87185	Sorghum	cytosol	15.93	41.1
Os12t0108900-00	Rice	cytosol, nucleus	23.97	41.01
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	39.08	40.89
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	39.08	40.41
Zm00001d027329_P002	Maize	nucleus	46.8	40.31
TraesCS3A01G461500.1	Wheat	nucleus	41.38	39.25
TraesCS3A01G067600.1	Wheat	nucleus	42.86	34.39
TraesCS6D01G114500.1	Wheat	mitochondrion	24.63	31.45
HORVU7Hr1G000490.1	Barley	cytosol	1.15	21.88

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	EntrezGene:102606058	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase
GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR015940
InterPro:IPR030380	UniProt:M1AAR5	PFAM:PF00145	EnsemblPlantsGene:PGSC0003DMG400007182	PGSC:PGSC0003DMG400007182	EnsemblPlants:PGSC0003DMT400018502
PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM
SUPFAM:SSF53335	InterPro:UBA	UniParc:UPI000295DBA5	RefSeq:XP_006364774.1	RefSeq:XP_015159578.1	SEG:seg

Description

DNA methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400007182]

Coordinates

chr10:+:59513382..59519413

Molecular Weight (calculated)

69038.8 Da

IEP (calculated)

4.881

GRAVY (calculated)

-0.494

Length

609 amino acids

Sequence
(BLAST)

001: MDKNLSGEDN DDIDWDTEDE LEIQEIQDTV FPSCTDLRTT GQHVVCCDGE VSSSSVPFRS KFIQQFVVMG FPEESIAKAI EQNGENSDLV LDSLLTFKAL
101: DDSPEEQPSV SPPLEPSISS DESASEYNEN VLDNVYEEDS WSSDSDNYIN TVKQCYLNDE GSSLSEKEKM LLFLANMGYP AEEASIAMDK CGPKASLPEL
201: VDFICAAQMS RAEDPYLLED VKPNLKDILN DCGGYKKRKM YNELCNRKKQ REISGEEPIR LPKPMIGFGI PTESVPRMVQ RILPKKTIGP PYFYYENVAL
301: APKGVWDTIK RHLYEIEPEF VDSKYFSATA RKRGYLHNLP IENRFPLFPL PPRTIHEALP LSKRWWPSWD SRSKLNCLQT AIGSARLTDK IRKAVEKYDG
401: EPPMEIQKYV LYHCKKWNLV WVGRNKVAPL EPDEVEMLLG FPKNHTRGGG ISRTDRYKSL GNSFQVDTVA YHLSVLRDLF PNGINVLSLF SGIGGAEVAL
501: YRLGVPLNNV VSVEKSEVNR NIVRSWWEQT NQRGNLIHFD DVQLLSRDRL KKLIESLGGF DLVIGGSPCN NLAGSNRVSR DGLEGKESSL FFDYVRILDD
601: VKSIMSRHR

Best Arabidopsis Sequence Match ( AT5G15380.1 )
(BLAST)

001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR

Arabidopsis Description

DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.