Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0109200-00 | Rice | plastid | 15.81 | 71.86 |
| TraesCS6A01G124200.1 | Wheat | peroxisome | 20.03 | 71.03 |
| PGSC0003DMT400040081 | Potato | mitochondrion | 18.05 | 66.5 |
| TraesCS3A01G461200.1 | Wheat | cytosol, nucleus, peroxisome | 40.71 | 63.32 |
| TraesCS5A01G241800.1 | Wheat | nucleus | 50.72 | 62.3 |
| TraesCS6A01G338800.1 | Wheat | nucleus | 46.38 | 58.18 |
| Zm00001d044187_P001 | Maize | cytosol | 18.58 | 57.55 |
| TraesCS5A01G553300.3 | Wheat | nucleus | 46.11 | 57.38 |
| TraesCS3A01G461300.1 | Wheat | cytosol, nucleus, peroxisome | 40.05 | 57.04 |
| Os03t0110800-01 | Rice | nucleus | 44.27 | 56.28 |
| TraesCS6A01G163300.1 | Wheat | cytosol, nucleus, peroxisome | 41.24 | 54.15 |
| EER95283 | Sorghum | nucleus | 40.71 | 53.65 |
| Zm00001d048516_P001 | Maize | nucleus | 42.42 | 53.4 |
| EES00541 | Sorghum | nucleus | 42.42 | 52.96 |
| OQU93413 | Sorghum | nucleus | 41.63 | 52.06 |
| TraesCS4A01G267400.1 | Wheat | nucleus | 29.25 | 51.87 |
| TraesCS3A01G461500.1 | Wheat | nucleus | 43.35 | 51.25 |
| Zm00001d027329_P002 | Maize | nucleus | 43.35 | 46.53 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 21.34 | 45.51 |
| CDX85589 | Canola | nucleus | 26.61 | 45.39 |
| CDY40934 | Canola | nucleus | 25.69 | 45.03 |
| Bra023480.1-P | Field mustard | cytosol | 26.35 | 44.94 |
| VIT_14s0066g01040.t01 | Wine grape | cytosol | 31.49 | 44.92 |
| KRG93790 | Soybean | cytosol | 5.67 | 44.79 |
| CDY09872 | Canola | nucleus | 32.02 | 43.7 |
| Solyc02g062740.2.1 | Tomato | nucleus | 34.52 | 43.45 |
| KRG93258 | Soybean | nucleus | 33.07 | 43.28 |
| KRH56579 | Soybean | nucleus | 33.6 | 43.22 |
| Solyc10g078190.1.1 | Tomato | nucleus | 34.65 | 43.19 |
| PGSC0003DMT400018502 | Potato | nucleus | 34.39 | 42.86 |
| CDX69571 | Canola | nucleus | 31.36 | 42.81 |
| CDX85590 | Canola | cytosol | 31.36 | 42.65 |
| KRH69576 | Soybean | nucleus | 30.04 | 42.46 |
| CDX91035 | Canola | cytosol | 30.96 | 42.34 |
| PGSC0003DMT400004867 | Potato | nucleus | 33.86 | 42.34 |
| OQU87185 | Sorghum | cytosol | 13.04 | 41.95 |
| Solyc04g005250.2.1 | Tomato | nucleus | 33.47 | 41.85 |
| Bra008749.1-P | Field mustard | nucleus | 33.07 | 41.76 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 27.93 | 41.65 |
| AT5G14620.1 | Thale cress | nucleus | 32.54 | 39.46 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 32.15 | 39.1 |
| GSMUA_Achr11P... | Banana | nucleus | 23.72 | 39.05 |
| CDY40933 | Canola | cytosol | 32.02 | 38.21 |
| Bra023479.1-P | Field mustard | cytosol | 16.73 | 38.14 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 29.12 | 36.77 |
| Bra004388.1-P | Field mustard | cytosol | 31.62 | 29.48 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 18.18 | 27.6 |
| CDX95928 | Canola | golgi | 32.15 | 25.96 |
| TraesCS7A01G002900.3 | Wheat | plastid | 18.84 | 22.95 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 19.76 | 20.95 |
Protein Annotations
| KEGG:00270+2.1.1.37 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | InterPro:C5_MeTfrase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001525 | InterPro:IPR015940 | InterPro:IPR030380 | PFAM:PF00145 |
| PFscan:PS50030 | PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM |
| SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS3A01G067600 | EnsemblPlants:TraesCS3A01G067600.1 | InterPro:UBA | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:+:40560558..40565782
Molecular Weight (calculated)
84811.1 Da
IEP (calculated)
4.429
GRAVY (calculated)
-0.480
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDWVSDSND SDMFDWESDG LAEPLLALAL NNLDASGPSM LDVTGWAKGK APSASLVEEF VRMGYPKEIV LMAVEACGYN DANDILELLL TFKALVNYPS
101: MENSFTSGCT PHDVEDDEDN DLDFAKWDDG GDDAGERAAN SNDSSDEAES LSASALSNLD ALGPSTLDVN GWAKEKAPSS SSLEEYVGMG YPKEMLLKAV
201: KAIGYSHANE FLDLLLTFET LGNYPSMGNC FTPGCTPHDA ADDDDSDIDF ENLNDDDDAN DSTNWNGDDD DDIDFKNWDD DDDGAGETEA NSNGSGDEDF
301: AQAMLEKDEN IKDFAQAMLE KDAGFPEVRA NMAFSRGADD ALFALLDSKN FSTREVTNKI FNSLKRRKEG RFMEESKKKR MRCGGEAQGN WLPLNGSDDE
401: PIVLPNPMVG FSLPNSMVQP VKRSLPEQAI GPPFFYYENV AQTPKRTWDT IKGELYGVEP EFLDSKYICA TARKRGYIHN LPIENRSSLC LEPPKTIFEA
501: FPHYRKWWPS WDSRKQLNCL TTCVPSSRLT ELIEFVLSVA ENPPSLRVQK YVMALCRQYN LVWVGKNRVA HLEPHEMEYL LGFPRNHTRG VTRTQRYKSL
601: GNSFQVDTVT YHLSVLRDMF PDGINVLSLF TGIGGGEVAL HRLGIHMRIV VSVEISKVNK RILRSWWNQT QTGELIQIPD VRTLTDDKIR SFIESIGGFD
701: LVIGGSPCNN LAGRNRFHRD GLEGEHSSLF YQYPRILNTV KSEMARIKHL AISHCCKPV
101: MENSFTSGCT PHDVEDDEDN DLDFAKWDDG GDDAGERAAN SNDSSDEAES LSASALSNLD ALGPSTLDVN GWAKEKAPSS SSLEEYVGMG YPKEMLLKAV
201: KAIGYSHANE FLDLLLTFET LGNYPSMGNC FTPGCTPHDA ADDDDSDIDF ENLNDDDDAN DSTNWNGDDD DDIDFKNWDD DDDGAGETEA NSNGSGDEDF
301: AQAMLEKDEN IKDFAQAMLE KDAGFPEVRA NMAFSRGADD ALFALLDSKN FSTREVTNKI FNSLKRRKEG RFMEESKKKR MRCGGEAQGN WLPLNGSDDE
401: PIVLPNPMVG FSLPNSMVQP VKRSLPEQAI GPPFFYYENV AQTPKRTWDT IKGELYGVEP EFLDSKYICA TARKRGYIHN LPIENRSSLC LEPPKTIFEA
501: FPHYRKWWPS WDSRKQLNCL TTCVPSSRLT ELIEFVLSVA ENPPSLRVQK YVMALCRQYN LVWVGKNRVA HLEPHEMEYL LGFPRNHTRG VTRTQRYKSL
601: GNSFQVDTVT YHLSVLRDMF PDGINVLSLF TGIGGGEVAL HRLGIHMRIV VSVEISKVNK RILRSWWNQT QTGELIQIPD VRTLTDDKIR SFIESIGGFD
701: LVIGGSPCNN LAGRNRFHRD GLEGEHSSLF YQYPRILNTV KSEMARIKHL AISHCCKPV
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.