Factsheet for Bra008749.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002360.1-P
Bra002361.1-P
Bra002520.1-P
Bra003735.1-P
Bra008231.1-P
Bra009513.1-P
Bra015801.1-P
Bra018814.1-P
Bra020152.1-P
Bra021203.1-P
Bra022181.1-P
Bra031085.1-P
Bra034318.1-P
Bra036717.1-P
Bra040678.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14620.1	Bra018814.1-P	AT1G49590.1	23524848
AT5G14620.1	Bra003735.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra008231.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra015801.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra031085.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra036717.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra040678.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra034318.1-P	AT2G27040.1	24855943
AT5G14620.1	Bra021203.1-P	AT3G16830.1	24855943
AT5G14620.1	Bra022181.1-P	AT3G16830.1	24855943
AT5G14620.1	Bra002520.1-P	AT3G45980.1	24855943
AT5G14620.1	Bra009513.1-P	AT5G03740.1	24855943
AT5G14620.1	Bra002360.1-P	AT5G21150.1	24855943
AT5G14620.1	Bra002361.1-P	AT5G21150.1	24855943
AT5G14620.1	Bra020152.1-P	AT5G21150.1	24855943

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69571	Canola	nucleus	82.86	89.57
HORVU4Hr1G017920.1	Barley	cytosol	9.65	71.6
Os11t0109200-00	Rice	plastid	18.64	67.07
Bra023480.1-P	Field mustard	cytosol	47.59	64.27
AT5G14620.1	Thale cress	nucleus	64.56	61.98
TraesCS6A01G124200.1	Wheat	peroxisome	21.96	61.68
Bra023479.1-P	Field mustard	cytosol	34.11	61.56
TraesCSU01G224900.1	Wheat	peroxisome	37.44	60.0
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	42.26	55.82
TraesCS3D01G454900.1	Wheat	peroxisome	41.26	54.99
Zm00001d044187_P001	Maize	cytosol	22.13	54.29
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	41.76	51.43
KRH69576	Soybean	nucleus	44.09	49.35
Os03t0110800-01	Rice	nucleus	47.42	47.74
HORVU3Hr1G098970.1	Barley	nucleus	40.27	47.73
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	34.44	47.7
HORVU6Hr1G081790.1	Barley	nucleus	42.43	47.22
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	40.77	45.97
TraesCS5A01G241800.1	Wheat	nucleus	46.92	45.63
EER95283	Sorghum	nucleus	43.43	45.31
TraesCS5D01G248300.1	Wheat	nucleus	46.42	45.15
Zm00001d048516_P001	Maize	nucleus	44.93	44.78
TraesCSU01G140500.1	Wheat	nucleus	43.76	43.76
TraesCS4A01G267400.1	Wheat	nucleus	31.11	43.69
OQU93413	Sorghum	nucleus	44.09	43.66
TraesCSU01G124200.1	Wheat	nucleus	43.76	43.62
TraesCS5A01G553300.3	Wheat	nucleus	44.26	43.61
EES00541	Sorghum	nucleus	44.09	43.59
TraesCS6A01G338800.1	Wheat	nucleus	43.76	43.47
TraesCS4D01G046800.1	Wheat	nucleus	43.43	43.43
GSMUA_Achr8P33680_001	Banana	cytosol	36.77	43.42
TraesCS6D01G319500.2	Wheat	nucleus	43.43	43.14
TraesCS4B01G012300.2	Wheat	cytosol	22.8	43.08
HORVU4Hr1G089730.3	Barley	nucleus	25.29	42.58
Os12t0108900-00	Rice	cytosol, nucleus	24.96	42.13
GSMUA_Achr11P...	Banana	nucleus	32.28	42.08
TraesCSU01G140600.1	Wheat	nucleus	43.26	41.94
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	39.43	40.72
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	39.1	40.66
TraesCS3A01G461500.1	Wheat	nucleus	43.09	40.34
OQU87185	Sorghum	cytosol	15.81	40.25
Bra004388.1-P	Field mustard	cytosol	53.91	39.8
GSMUA_Achr3P23940_001	Banana	nucleus	39.27	39.27
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	37.94	38.71
Zm00001d027329_P002	Maize	nucleus	44.43	37.77
TraesCS3A01G067600.1	Wheat	nucleus	41.76	33.07
TraesCS6D01G114500.1	Wheat	mitochondrion	24.79	31.24
HORVU7Hr1G000490.1	Barley	cytosol	1.5	28.12
Bra031188.1-P	Field mustard	nucleus	22.63	23.78
Bra022208.1-P	Field mustard	plasma membrane, vacuole	27.12	18.19

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra008749	EnsemblPlants:Bra008749.1
EnsemblPlants:Bra008749.1-P	InterPro:C5_MeTfrase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380	UniProt:M4CX02
PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases
InterPro:SAM_MeTfrase_DRM	InterPro:SANT/Myb	SUPFAM:SSF46934	SUPFAM:SSF53335	InterPro:UBA	InterPro:UBA-like_sf
UniParc:UPI00025451AA	SEG:seg	:	:	:	:

Description

AT5G14620 (E=3e-231) DRM2, DMT7 | DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2); N-methyltransferase

Coordinates

chrA10:+:13688219..13691659

Molecular Weight (calculated)

66998.0 Da

IEP (calculated)

4.635

GRAVY (calculated)

-0.443

Length

601 amino acids

Sequence
(BLAST)

001: MAQDSADWNS DDDLDLQIDN YQSSPPSSPP AAVPSSDELF ATLVDMGFSP ENIARAIDEY GPNADTVVII DAISKYTVTC EASSSKSKTI DHFLAMGFEE
101: EKVIKAIHEH GEDNIEEIAN ALISSAAEVS PKIKEEEDIE WSESDDEKYA NFLSSDDEKV SDSSSENGNQ LRSLMNMGFS ELEASLAIER CGTGEDVSIA
201: DLADFICAAQ IAREFDEFHA DPEEQKPNVK KRRIEPRREP RSSAADDEPL RLPNPMIGFG VPNEPGLITQ RSLPAMARMP PFFYYENVAL APKGVWDTIS
301: SHLYDVPPEF VDSKYICAAA RKRGYVHNLP ISGRYQVQPP PKYTISEAFP LTKKWWPEWD KRTKLNCILT VNASAQLTNR IRLALEPYGG EPPESKKKYV
401: IEQCKKWNLV WVGKNKAAPL EPDEMETLLG FPKNHTRGGG MSRTERLKSL GNSFQVDTVA YHLSVLKPLF PYGINVLSLF TGIGGGEVAL HRLQIPMKTV
501: VSVEISAVNR NILKDFWEQT NQKGTLIEFA DVQDLSNEKI VELMKQFGGF DLVIGGSPCN NLAGGNRVSR SGLEGDQSCL FYEYCRILDV VRETTKTMRR
601: S

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.