Factsheet for Bra022181.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92100	Canola	cytosol	99.65	99.65
AT3G16830.1	Thale cress	cytosol	91.87	91.95
Bra021203.1-P	Field mustard	cytosol	93.9	84.7
KXG32191	Sorghum	cytosol	70.58	71.02
Bra020567.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.25	70.36
Zm00001d040279_P012	Maize	cytosol	69.88	70.31
Os01t0254100-01	Rice	nucleus	70.05	70.24
TraesCS3D01G179800.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.79	69.54
TraesCS3B01G204200.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.7	69.45
TraesCS3A01G173300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.52	69.28
Bra009930.1-P	Field mustard	cytosol	65.46	68.67
GSMUA_Achr11P...	Banana	cytosol	68.37	68.19
GSMUA_Achr2P00320_001	Banana	cytosol	70.49	66.89
Bra026112.1-P	Field mustard	cytosol	62.46	63.12
Bra003569.1-P	Field mustard	cytosol	60.69	63.09
Bra026751.1-P	Field mustard	cytosol	62.19	62.3
Bra001613.1-P	Field mustard	cytosol	58.57	59.04
Bra021142.1-P	Field mustard	cytosol	58.75	58.69
Bra028653.1-P	Field mustard	mitochondrion	57.95	53.64
Bra006005.1-P	Field mustard	cytosol	49.03	51.68
Bra006006.1-P	Field mustard	cytosol	40.64	46.99
Zm00001d008338_P001	Maize	cytosol	57.24	46.59
Bra000550.1-P	Field mustard	cytosol	15.02	27.64

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EnsemblPlantsGene:Bra022181	EnsemblPlants:Bra022181.1	EnsemblPlants:Bra022181.1-P
InterPro:CTLH_C	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680
InterPro:IPR006594	InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH	UniProt:M4E084
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897
PANTHER:PTHR44083	PANTHER:PTHR44083:SF3	InterPro:Quino_amine_DH_bsu	InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SMART:SM00667
SMART:SM00668	SUPFAM:SSF50969	SUPFAM:SSF50978	SUPFAM:SSF50998	InterPro:Topless_fam	UniParc:UPI0002547728
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

AT3G16830 (E=0.0) TPR2 | TPR2 (TOPLESS-RELATED 2)

Coordinates

chrA05:-:19250044..19255347

Molecular Weight (calculated)

125026.0 Da

IEP (calculated)

7.537

GRAVY (calculated)

-0.347

Length

1132 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFYFNIKY FEEKALAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR NIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCNAANGG ARALTPVNLP VAAVARPSNF VPLGVHGGPF QPTPAPAPNP NALAGWMANP NPSSSVPSGV VASASPFPMQ QPNQVNALKH PRPPSNSLGL
0301: MDYQNAADHD QLMRRLRSAQ NEVTYPAHSH PPSASLDDLP RNVVSTMRQG SVVMSMDFHP AHHTLLAVGG SRGEVSLWEV GSREKIVTEP FKIWNMSACS
0401: GVLQGTIVKE PSISVTRVAW SPDGNFIGVS FTKHLIHVYA YQGSDLRQHL EIEAHVGRVN DLAFAHPNKQ ICIVTCGDDK LIKVWDINGK KLYTFEGHEA
0501: SVYSICPHQK ENIQFIFSTA LDGKIKAWLY DNVGSRVDYD APGQWCTTML YSADGSRLFS CGTSKEGDSF LVEWNESEGA LKRTYVGFRK KSNGVVQFDT
0601: TRNRFLAVGE DNQVKFWDMD NTNLLTTIEA EGGLPSLPRL RFNKEGNLLA VSTADNGFKI LANADGLRTL RAYEASKASI EMKVSTSAMV SALSPVVGKI
0701: EHMDTSSPAR PTPIPNGIEA MSRSIEKPRN LESVVDKSKP LELTEIVDPT QCRQVTMPDS KDSVSKVARL LYTNSGVGVL ALGANGVQRL WKWSRNEQNP
0801: TGKATANLTP QHWQPNSGLL MANDVSENPE SAVPCIALSK NDSYVMSACG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNIIAIG MEDSSIHIYN
0901: VRVDEVKTKL KGHQKHITGL AFSTALNTLV SSGADAQLFF WTADTWEKKK SSAISLPPGK APVGDTRVQF HNDQVHLLVS HETQLAIYDA TKMECIHKWV
1001: PQEALSSPIT SASYSCNSQL VYASFADGNI AVFDADSLRL RCRIAPSAYM PQPIPNSAPI IPQVITTHPQ EPNQLAVGLS DGSVKVIEPS EASRRWGVGV
1101: AVTADKSGAE NGRPSSSSAA NNNSSSDHQM QR

Best Arabidopsis Sequence Match ( AT3G16830.1 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFFFNIKY FEEKALAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR SIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCSPSNGA RALTPVNLPV AAVARPSNFV PLGVHGGPFQ SNPAPAPNAN ALAGWMANPN PSSSVPSGVV AASPFPMQPS QVNELKHPRA PSNSLGLMDY
0301: QSADHEQLMK RLRSAQTSNE VTYPAHSHPP ASLDDLPRNV VSTIRQGSVV ISMDFHPSHH TLLAVGCSSG EVTLWEVGSR EKVVTEPFKI WNMAACSVIF
0401: QGSIVKEPSI SVTRVAWSPD GNLLGVSFTK HLIHVYAYQG SDLRQHLEID AHVGCVNDLA FAHPNKQMCV VTCGDDKLIK VWDLSGKKLF TFEGHEAPVY
0501: SICPHQKENI QFIFSTALDG KIKAWLYDNV GSRVDYDAPG QWCTTMLYSA DGSRLFSCGT SKEGDSFLVE WNESEGALKR TYLGFRKKSA GVVQFDTTRN
0601: RFLAVGEDNQ IKFWNMDNTN LLTVVEAEGG LPNLPRLRFN KDGNLLAVTT ADNGFKILAN TDGLRTLRAF EARSFEASKA SIDMKVSTSA MASSISPAIG
0701: KIEHMDAGSP ARPTPIPNGI EAMSRTMEKP RNLDSVDKSK PLELTEIVDP TQCRQVTMPD SKDSVSKVAR LLYTNSGVGV LALGSNGVQR LWKWIRNEQN
0801: PTGKATASVT PQHWQPNSGL LMANDVPENP EGSVPCIALS KNDSYVMSAC GGKVSLFNMM TFKVMTTFMP PPPASTFLAF HPQDNNIIAI GMEDSSIHIY
0901: NVRVDEVKTK LKGHQKHITG LAFSTALNIL VSSGADAQLF FWTADSWEKK KSSAIQLPPG KAPVGDTRVQ FHNDQIQLLV SHETQLAIYD ASKMECIHKW
1001: VPQEALSSPI TSASYSCNSQ LVYASFADGN IAVFDAESLR LRCRIAPSAY MPQPTPNSAP IFPQVITAHP QEPNQLAVGL SDGSVKVIEP SELSRRWGVG
1101: VAAGSDKAGT ENGRPSSSSA ANNSSSDQIQ R

Arabidopsis Description

TPR2Topless-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.