Factsheet for Bra026751.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53312	Canola	cytosol	96.55	99.54
Bra026112.1-P	Field mustard	cytosol	97.35	98.21
AT1G15750.3	Thale cress	cytosol	97.08	96.99
Bra003569.1-P	Field mustard	cytosol	89.82	93.2
KRH23604	Soybean	endoplasmic reticulum	84.69	84.54
VIT_09s0002g08370.t01	Wine grape	cytosol	85.13	84.53
KRH44501	Soybean	cytosol	84.69	84.47
KRH47407	Soybean	cytosol	84.42	84.42
KRH09700	Soybean	cytosol	82.65	82.65
Solyc03g117360.2.1	Tomato	nucleus	82.12	82.12
GSMUA_Achr4P09920_001	Banana	cytosol	79.65	78.26
EER92538	Sorghum	cytosol	77.79	78.13
TraesCS4D01G221200.1	Wheat	cytosol	78.32	78.04
TraesCS4A01G083300.2	Wheat	cytosol	78.23	77.89
Os03t0254700-01	Rice	cytosol	78.05	77.85
TraesCS4B01G220900.3	Wheat	cytosol	77.96	77.55
HORVU0Hr1G008690.1	Barley	cytosol, endoplasmic reticulum	77.88	77.46
GSMUA_Achr6P36440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.41	76.78
GSMUA_Achr6P22950_001	Banana	plasma membrane	78.58	71.73
Bra001613.1-P	Field mustard	cytosol	69.11	69.55
Bra021142.1-P	Field mustard	cytosol	69.2	69.02
Bra020567.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.38	62.95
Bra022181.1-P	Field mustard	cytosol	62.3	62.19
Bra009930.1-P	Field mustard	cytosol	58.76	61.54
Bra028653.1-P	Field mustard	mitochondrion	64.07	59.2
Bra006005.1-P	Field mustard	cytosol	53.72	56.52
Bra021203.1-P	Field mustard	cytosol	62.12	55.94
Bra006006.1-P	Field mustard	cytosol	43.98	50.77
Zm00001d050983_P001	Maize	cytosol	11.06	50.0
Zm00001d004623_P001	Maize	cytosol, plastid	11.15	46.67
Zm00001d027915_P001	Maize	cytosol	11.5	41.94
Zm00001d045829_P001	Maize	mitochondrion	10.88	37.73
Zm00001d052868_P001	Maize	cytosol, peroxisome, plasma membrane	7.35	35.17
Bra000550.1-P	Field mustard	cytosol	17.35	31.87

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EnsemblPlantsGene:Bra026751	EnsemblPlants:Bra026751.1	EnsemblPlants:Bra026751.1-P
InterPro:CTLH_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680	InterPro:IPR006594
InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH	UniProt:M4ED91	PFAM:PF00400
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR44083
PANTHER:PTHR44083:SF2	SMART:SM00320	SMART:SM00667	SMART:SM00668	SUPFAM:SSF101898	SUPFAM:SSF50978
InterPro:Topless_fam	UniParc:UPI0002542CB5	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

AT1G15750 (E=0.0) WSIP1, TPL | TPL (TOPLESS); protein binding / protein homodimerization/ transcription repressor

Coordinates

chrA09:+:33523176..33528568

Molecular Weight (calculated)

124246.0 Da

IEP (calculated)

7.224

GRAVY (calculated)

-0.305

Length

1130 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVEILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVSNPL LGGLPKAGGF PPLGAHGPFQ PTASPVPPPL AGWMSSPSSV PHPAVSAGPI ALGGPSIPAA LKHPRTPPTN PALDYPSAES
0301: EHVSKRTRPM GISEEVSLGV NMLPMSFPGQ AHGHSPAFKA PDDLPKTVAR TLTQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: ISKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESYIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDNVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKVMAN SDGLRLLHTF ENVSSESSKP AINSLAAAAA
0701: AAATSAAADR SANVVSIQAM NGDARNMVDV KPVITEESND KSKIWKLTEV SEPSQCRSLR LPENLRVAKI SRLIFTNSGN AILALASNAI HLLWKWQRNE
0801: RNATGKATAS LPPQQWQPAS GILMTNDAAE NNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI
0901: QIYNVRVDEV KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQRSKVLPL PQGRPNTAPS DTRVQFHQDQ AHFLVVHETQ LAIYETTKLE
1001: CMKQWPVRES SAPITHATFS CDSQLVYASF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVNPLVIA AHPQEPNMFA VGLSDGGVHI FEPVESEGKW
1101: GVAPPAENGS ANGAVAAPSV GASASDQPQR

Best Arabidopsis Sequence Match ( AT1G15750.3 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.