Factsheet for Os03t0254700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G083300.2	Wheat	cytosol	93.82	93.66
TraesCS4D01G221200.1	Wheat	cytosol	93.73	93.65
TraesCS4B01G220900.3	Wheat	cytosol	93.73	93.49
HORVU0Hr1G008690.1	Barley	cytosol, endoplasmic reticulum	93.73	93.49
EER92538	Sorghum	cytosol	92.59	93.24
Zm00001d047897_P013	Maize	cytosol	92.06	92.22
Zm00001d028481_P017	Maize	cytosol	92.06	92.22
GSMUA_Achr4P09920_001	Banana	cytosol	85.17	83.91
GSMUA_Achr6P36440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.38	82.84
KRH23604	Soybean	endoplasmic reticulum	81.47	81.54
KRH44501	Soybean	cytosol	81.02	81.02
KRH47407	Soybean	cytosol	80.67	80.89
VIT_09s0002g08370.t01	Wine grape	cytosol	80.94	80.58
KRH09700	Soybean	cytosol	79.96	80.18
AT1G15750.3	Thale cress	cytosol	78.46	78.6
CDY36584	Canola	cytosol	77.41	78.44
Bra003569.1-P	Field mustard	cytosol	75.29	78.33
AT1G80490.2	Thale cress	cytosol	77.41	78.3
Bra026112.1-P	Field mustard	cytosol	77.32	78.21
CDY33387	Canola	cytosol	77.14	78.18
CDX81729	Canola	cytosol	76.96	78.07
Bra026751.1-P	Field mustard	cytosol	77.85	78.05
CDY53312	Canola	cytosol	75.46	78.01
CDX67950	Canola	cytosol	77.32	77.94
CDX79383	Canola	cytosol	76.79	77.68
GSMUA_Achr6P22950_001	Banana	plasma membrane	84.55	77.38
PGSC0003DMT400036646	Potato	cytosol, plastid	20.74	76.8
PGSC0003DMT400036648	Potato	plastid	59.31	76.62
Os08t0162100-01	Rice	nucleus	68.23	68.23
PGSC0003DMT400036649	Potato	cytosol	27.18	63.24
Os01t0254100-01	Rice	nucleus	61.69	61.91
VIT_04s0008g06380.t01	Wine grape	cytosol	9.8	61.67
VIT_04s0008g06340.t01	Wine grape	cytosol	8.38	55.23
VIT_04s0008g06330.t01	Wine grape	extracellular	55.34	55.15
Solyc05g016070.1.1	Tomato	cytosol	6.35	54.96
VIT_04s0008g06400.t01	Wine grape	mitochondrion	9.71	54.19
KRH52398	Soybean	cytosol	47.04	50.57
KRH61732	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.22	50.47
KRH05196	Soybean	cytosol	23.57	49.17
VIT_04s0008g06390.t01	Wine grape	extracellular	9.0	46.58
CDX79301	Canola	cytosol	5.74	29.95

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EntrezGene:4332285	EMBL:AB638270	ProteinID:ABF95023.1
ProteinID:BAF11501.1	ProteinID:BAS83314.1	InterPro:CTLH_C	ProteinID:EEE57834.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986
InterPro:LisH	EnsemblPlantsGene:Os03g0254700	EnsemblPlants:Os03t0254700-01	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR44083	PANTHER:PTHR44083:SF2	UniProt:Q10NY2
InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SMART:SM00667	SMART:SM00668	SUPFAM:SSF50978	SUPFAM:SSF50998
InterPro:Topless_fam	UniParc:UPI0000DB4CE1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	RefSeq:XP_015631118.1	RefSeq:XP_015631120.1	SEG:seg	:	:

Description

TOPLESS-RELATED PROTEIN 3WD40 repeat-like domain containing protein. (Os03t0254700-01);Similar to predicted protein. (Os03t0254700-02)

Coordinates

chr3:-:8165841..8174895

Molecular Weight (calculated)

125213.0 Da

IEP (calculated)

7.141

GRAVY (calculated)

-0.307

Length

1133 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVINGNW DEVERYLGGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD
0101: LKVFASFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPNLKSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGQPNGA RAPSPANNPL LGSIPKPGGF PPLGAHAPFQ PAPTPVPPLA GWMSNPPAVT HPAVSGGAIG FGTPTNPAAI LKHPRTPTTA NPSMDYPSGD
0301: SDHVSKRTRP VGMSEEVNLP VNMLPVTYPQ SHSYPQDDFH KNVARTLSQG STPMSMDFHP VQQTLLLVGT NVGDIGLWDV GTKERLVLRN FKVWDLTKCS
0401: MALQASLVKD PTVSVNRIIW SPDGTLFGVA YSRHIVQIYS YHGGDDIRQH LEIDAHVGGV NDIAFAHPNK QLCIITCGDD KTIKVWEATS GAKQFTFEGH
0501: EAPVYSVCPH YKENIQFIFS TALDGKIKAW LYDNLGSRVD YDAPGHWCTT MAYSADGSRL FSCGTSKDGE SHLVEWNESE GAVKRTYQGF RKRSMGVVQF
0601: DTTRNRFLAA GDEFLIKIWD MDNTSLLTTI DADGGLPASP RVRFNKEGTL LAVSTHENGI KILANADGVR LLRTLENRSF DASRSASETV TKPLMNPLTA
0701: AAAAAASAAA AGTSSGNAAP PAITALNGDS RSLVDVKPRI ADEPLDKSKV WKLMEITESS QCRSLKLTDN MRTSKISRLI YTNSGVAILA LASNAVHLLW
0801: KWPRNDRNSS GKATASVSPQ LWQPPSGILM TNDITDNPEE AVHCFALSKN DSYVMSASGG KISLFNMMTF KTMTTFMPPP PAATFLAFHP QDNNIIAIGM
0901: DDSTIQIYNV RIDEVKSKLR GHSKKITGLA FSNVLNVLVS SGADAQICVW STDGWDKLKS RMLQIPSSRP SSIILDTRVQ FHQDQLHFLV VHETQIAIYE
1001: TTKLEPVKQW PVRENSSPIT HAMFSCDSQL IYASFLDATV CIFNASSLRL QCRILPASYL PQNISSNVYP VVVAAHPSEA NQFALGLTDG GVYVLEPLES
1101: ERKWGNPPPA ENGSTSALST PPNGASSSDQ PER

Best Arabidopsis Sequence Match ( AT1G15750.3 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.