Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53312 | Canola | cytosol | 97.31 | 99.18 |
| CDY36584 | Canola | cytosol | 97.94 | 97.85 |
| CDY33387 | Canola | cytosol | 97.76 | 97.67 |
| AT1G15750.3 | Thale cress | cytosol | 97.22 | 96.02 |
| CDX67950 | Canola | cytosol | 92.66 | 92.08 |
| CDX79383 | Canola | cytosol | 91.94 | 91.7 |
| KRH23604 | Soybean | endoplasmic reticulum | 85.23 | 84.1 |
| KRH44501 | Soybean | cytosol | 85.23 | 84.02 |
| VIT_09s0002g08370.t01 | Wine grape | cytosol | 85.59 | 84.01 |
| KRH47407 | Soybean | cytosol | 84.96 | 83.98 |
| KRH09700 | Soybean | cytosol | 83.08 | 82.12 |
| Solyc03g117360.2.1 | Tomato | nucleus | 82.63 | 81.68 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 80.04 | 77.74 |
| EER92538 | Sorghum | cytosol | 78.07 | 77.51 |
| TraesCS4D01G221200.1 | Wheat | cytosol | 78.51 | 77.34 |
| TraesCS4A01G083300.2 | Wheat | cytosol | 78.42 | 77.18 |
| Os03t0254700-01 | Rice | cytosol | 78.07 | 76.96 |
| TraesCS4B01G220900.3 | Wheat | cytosol | 78.16 | 76.85 |
| HORVU0Hr1G008690.1 | Barley | cytosol, endoplasmic reticulum | 78.07 | 76.76 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.87 | 76.34 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 78.96 | 71.24 |
| CDX82426 | Canola | cytosol | 70.37 | 69.37 |
| CDX75851 | Canola | cytosol | 70.19 | 69.2 |
| CDY20161 | Canola | cytosol | 69.74 | 68.76 |
| CDY21881 | Canola | cytosol | 69.47 | 68.49 |
| CDY67912 | Canola | cytosol | 35.9 | 67.51 |
| CDX92100 | Canola | cytosol | 62.76 | 61.93 |
| CDX95900 | Canola | cytosol | 62.85 | 61.8 |
| CDY25010 | Canola | cytosol | 61.24 | 61.51 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.15 | 61.48 |
| CDX80607 | Canola | cytosol | 60.97 | 60.97 |
| CDX88252 | Canola | cytosol | 60.25 | 60.69 |
| CDY50502 | Canola | cytosol, plastid | 62.76 | 55.11 |
| CDY50500 | Canola | cytosol | 24.26 | 53.66 |
| CDY04683 | Canola | mitochondrion | 5.55 | 50.0 |
| Zm00001d050983_P001 | Maize | cytosol | 10.65 | 47.6 |
| Zm00001d004623_P001 | Maize | cytosol, plastid | 10.74 | 44.44 |
| Zm00001d027915_P001 | Maize | cytosol | 11.01 | 39.68 |
| Zm00001d045829_P001 | Maize | mitochondrion | 10.92 | 37.42 |
| Zm00001d052868_P001 | Maize | cytosol, peroxisome, plasma membrane | 7.34 | 34.75 |
| CDX83225 | Canola | cytosol | 21.75 | 32.49 |
| CDY38509 | Canola | cytosol | 21.75 | 31.72 |
| CDX79301 | Canola | cytosol | 6.0 | 30.88 |
| CDY12727 | Canola | golgi | 8.24 | 26.51 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078D0G1 | EnsemblPlants:CDX81729 | ProteinID:CDX81729 |
| ProteinID:CDX81729.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00136660001 |
| InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 |
| PANTHER:PTHR44083 | PANTHER:PTHR44083:SF2 | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50978 |
| InterPro:Topless_fam | UniParc:UPI0004EF4434 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC08g38720D
Coordinates
chrLK031826:-:538228..544448
Molecular Weight (calculated)
123049.0 Da
IEP (calculated)
7.237
GRAVY (calculated)
-0.321
Length
1117 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVEILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVSNPL LGGLPKAGGF PPLGAHGPFQ PTASPVPPPL AGWMSSPSSV PHPAVSAGPI ALGGPSIPAA LKHPRTPPTN PALDYPSAES
0301: EHVSKRTRPM GISDEVNLGA HGHSPAFKAP DDLPKTVART LTQGSSPMSM DFHPIKQTLL LVGTNVGDIG LWEVGSRERF VQKTFKVWDI SKCSMPLQAA
0401: LVKEPVVSVN RVIWSPDGSL FGVAYSRHIV QLYSYHGGED MRQHLEIDAH VGGVNDISFS TPNKQLCVIT CGDDKTIKVW DAATGVKRHT FEGHEAPVYS
0501: VCPHYKENIQ FIFSTALDGK IKAWLYDNMG SRVDYDAPGR WCTTMAYSAD GTRLFSCGTS KDGESYIVEW NESEGAVKRT YQGFHKRSLG VVQFDTTKNR
0601: YLAAGDDFSI KFWDMDNVQL LTAIDGDGGL QASPRIRFNK EGSLLAVSGN ENVIKVMANS DGLRLLHTFE NVSSESSKPA INSLATAAAA TSAAADRSAN
0701: VVSIQAMNGD ARNMVDVKPV ITEESNDKSK IWKLTEVSEP SQCRSLRLPE NLRVAKISRL IFTNSGNAIL ALASNAIHLL WKWQRNERNA TGKATASLPP
0801: QQWQPASGIL MTNDAAENNP EEAVPCFALS KNDSYVMSAS GGKISLFNMM TFKTMATFMP PPPAATFLAF HPQDNNIIAI GMDDSTIQIY NVRVDEVKSK
0901: LKGHSKRITG LAFSNVLNVL VSSGADAQLC VWNTDGWEKQ RSKVLPLPQG RPNTAPSDTR VQFHQDQAHF LVVHETQLAI YETTKLECMK QWPVRESSAP
1001: ITHATFSCDS QLVYASFMDA TICVFSSANL RLRCRVNPSA YLPASLSNSN VHPLVIAAHP QEPNMFAVGL SDGGVHIFEP FESEGKWGVA PPAENGSANG
1101: AVAAPSVGAS ASDQPQR
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVSNPL LGGLPKAGGF PPLGAHGPFQ PTASPVPPPL AGWMSSPSSV PHPAVSAGPI ALGGPSIPAA LKHPRTPPTN PALDYPSAES
0301: EHVSKRTRPM GISDEVNLGA HGHSPAFKAP DDLPKTVART LTQGSSPMSM DFHPIKQTLL LVGTNVGDIG LWEVGSRERF VQKTFKVWDI SKCSMPLQAA
0401: LVKEPVVSVN RVIWSPDGSL FGVAYSRHIV QLYSYHGGED MRQHLEIDAH VGGVNDISFS TPNKQLCVIT CGDDKTIKVW DAATGVKRHT FEGHEAPVYS
0501: VCPHYKENIQ FIFSTALDGK IKAWLYDNMG SRVDYDAPGR WCTTMAYSAD GTRLFSCGTS KDGESYIVEW NESEGAVKRT YQGFHKRSLG VVQFDTTKNR
0601: YLAAGDDFSI KFWDMDNVQL LTAIDGDGGL QASPRIRFNK EGSLLAVSGN ENVIKVMANS DGLRLLHTFE NVSSESSKPA INSLATAAAA TSAAADRSAN
0701: VVSIQAMNGD ARNMVDVKPV ITEESNDKSK IWKLTEVSEP SQCRSLRLPE NLRVAKISRL IFTNSGNAIL ALASNAIHLL WKWQRNERNA TGKATASLPP
0801: QQWQPASGIL MTNDAAENNP EEAVPCFALS KNDSYVMSAS GGKISLFNMM TFKTMATFMP PPPAATFLAF HPQDNNIIAI GMDDSTIQIY NVRVDEVKSK
0901: LKGHSKRITG LAFSNVLNVL VSSGADAQLC VWNTDGWEKQ RSKVLPLPQG RPNTAPSDTR VQFHQDQAHF LVVHETQLAI YETTKLECMK QWPVRESSAP
1001: ITHATFSCDS QLVYASFMDA TICVFSSANL RLRCRVNPSA YLPASLSNSN VHPLVIAAHP QEPNMFAVGL SDGGVHIFEP FESEGKWGVA PPAENGSANG
1101: AVAAPSVGAS ASDQPQR
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.