Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88252 | Canola | cytosol | 95.43 | 96.12 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 91.32 | 91.81 |
| CDY25010 | Canola | cytosol | 91.05 | 91.46 |
| AT5G27030.2 | Thale cress | cytosol, endoplasmic reticulum | 89.7 | 88.36 |
| KRH33863 | Soybean | cytosol | 20.95 | 85.09 |
| VIT_14s0060g01680.t01 | Wine grape | cytosol | 78.25 | 77.21 |
| KRG92932 | Soybean | nucleus | 78.07 | 77.17 |
| KRG96753 | Soybean | endoplasmic reticulum | 77.62 | 76.73 |
| KRH68470 | Soybean | nucleus | 77.62 | 76.73 |
| Solyc01g100050.2.1 | Tomato | nucleus | 77.26 | 76.24 |
| PGSC0003DMT400063603 | Potato | cytosol | 76.99 | 75.97 |
| KRH33861 | Soybean | cytosol | 55.86 | 74.11 |
| CDY67912 | Canola | cytosol | 37.78 | 71.04 |
| KXG32191 | Sorghum | cytosol | 70.55 | 70.04 |
| Os01t0254100-01 | Rice | nucleus | 70.73 | 69.97 |
| Zm00001d040279_P012 | Maize | cytosol | 70.37 | 69.87 |
| TraesCS3D01G179800.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.56 | 68.4 |
| CDX92100 | Canola | cytosol | 69.2 | 68.29 |
| CDX95900 | Canola | cytosol | 69.38 | 68.22 |
| TraesCS3B01G204200.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.38 | 68.22 |
| TraesCS3A01G173300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.29 | 68.13 |
| GSMUA_Achr11P... | Banana | cytosol | 68.58 | 67.49 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 70.64 | 66.14 |
| CDY50500 | Canola | cytosol | 28.83 | 63.76 |
| CDX79383 | Canola | cytosol | 61.86 | 61.7 |
| CDX67950 | Canola | cytosol | 62.04 | 61.65 |
| CDY53312 | Canola | cytosol | 60.43 | 61.59 |
| CDY36584 | Canola | cytosol | 61.5 | 61.45 |
| CDY33387 | Canola | cytosol | 61.15 | 61.09 |
| CDX81729 | Canola | cytosol | 60.97 | 60.97 |
| CDY50502 | Canola | cytosol, plastid | 69.38 | 60.93 |
| CDY04683 | Canola | mitochondrion | 6.71 | 60.48 |
| CDY20161 | Canola | cytosol | 60.88 | 60.02 |
| CDY21881 | Canola | cytosol | 60.79 | 59.93 |
| CDX75851 | Canola | cytosol | 60.61 | 59.75 |
| CDX82426 | Canola | cytosol | 60.52 | 59.66 |
| KRH30800 | Soybean | mitochondrion | 16.65 | 57.06 |
| Zm00001d008338_P001 | Maize | cytosol | 57.65 | 46.3 |
| CDX79301 | Canola | cytosol | 6.71 | 34.56 |
| CDY38509 | Canola | cytosol | 20.14 | 29.37 |
| CDX83225 | Canola | cytosol | 19.52 | 29.14 |
| CDY12727 | Canola | golgi | 8.86 | 28.53 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078CV32 | EnsemblPlants:CDX80607 | ProteinID:CDX80607 |
| ProteinID:CDX80607.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00133736001 |
| InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 |
| PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 |
| SUPFAM:SSF50978 | SUPFAM:SSF50998 | InterPro:Topless_fam | UniParc:UPI0004EEE8D2 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
BnaC07g28370D
Coordinates
chrLK031821:-:1633791..1640450
Molecular Weight (calculated)
123106.0 Da
IEP (calculated)
7.275
GRAVY (calculated)
-0.262
Length
1117 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DEVEKYLSGF TKLDDNRYSM KIFFEIRKQK YLEALDKQDK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LHNFRENEQL SKYGDTKTAR TIMLGELKKL IEANPLFRDK LTFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAVPNGP LAPSPVNQPV TTLTKPTAFP SLGAHGPFPP GAAVAAAANA GALASWMAAA ASGASTVQAA VVTPASIPMP QNQVSILKRP RTPPATPGVV
0301: DYQNPDHELM KRLRPAPSVE EVTYPAPRQH APALSLEDLP LKAALALHQG STVTSMDFHP MQNTLLLVGS ATGEITLWEL AVREKLVSKP FKIWDMANCS
0401: PPLQALIAKE TPMSVTRVAW SPDGNFIGVA YTKHLIHVYA FSGPNELRQH AEVDAHTGAV NDLAFANPNR QLCVVTCGDD QLIKVWDVSG RKHFTFEGHE
0501: APVYSICPHH KENIQFIFST AIDGKIKAWL YDNMGSRVDY DAPGKWCTTM LYSADGTRLF SCGTSKDGDF SLVEWNESEG SIKRTYLGFQ KKLAGMVQFD
0601: TSKNHFLAVG EDAQIKFWDM DNINVLTSTD AEGGLPALPR LRFNREGNLL AVTTADNGFK ILANQAGFRS LRAMETSAFE KMRTPADSSL IKAVPGAPVA
0701: SVSCKVELGS PVRPSPMLNG GDPSKPRVDD SADKPKPWQL AEILDHAQCR QATLPDTTGS STKVVRLLYT NSGAGILALG FNGIQRLWKW VRNEQNPSGK
0801: ATAAAVPQHW QPNSGLLMTN DVSGVNLEEA NPCIALSKND SYVMSAAGGK VSLFNMMTFK VMTTFMPPPP PSSFLAFHPQ DNNIIAIGME DSTIHIYNVR
0901: VDEVKSKLKG HQKRITGLAF STTLNILVSS GADAQICFWS IDTWEKRKSV AIQMPAGKVA IGDTRVQFHV DQIRILAVHE TQLAIFDASK MECIRQWNPQ
1001: DSLSSHISSA VYACNSQLIY TTFRDGNIGV FDADTLGLRC RISPSAYLPQ GNQGLSPLVV AAHPQEPNQF AVGLNDGTVK VIEPTEAEGK WGMVPPSEAI
1101: NTSTSTTSNQ TPEQLQR
0101: LRVFSTFNEE LYKEITQLLT LHNFRENEQL SKYGDTKTAR TIMLGELKKL IEANPLFRDK LTFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAVPNGP LAPSPVNQPV TTLTKPTAFP SLGAHGPFPP GAAVAAAANA GALASWMAAA ASGASTVQAA VVTPASIPMP QNQVSILKRP RTPPATPGVV
0301: DYQNPDHELM KRLRPAPSVE EVTYPAPRQH APALSLEDLP LKAALALHQG STVTSMDFHP MQNTLLLVGS ATGEITLWEL AVREKLVSKP FKIWDMANCS
0401: PPLQALIAKE TPMSVTRVAW SPDGNFIGVA YTKHLIHVYA FSGPNELRQH AEVDAHTGAV NDLAFANPNR QLCVVTCGDD QLIKVWDVSG RKHFTFEGHE
0501: APVYSICPHH KENIQFIFST AIDGKIKAWL YDNMGSRVDY DAPGKWCTTM LYSADGTRLF SCGTSKDGDF SLVEWNESEG SIKRTYLGFQ KKLAGMVQFD
0601: TSKNHFLAVG EDAQIKFWDM DNINVLTSTD AEGGLPALPR LRFNREGNLL AVTTADNGFK ILANQAGFRS LRAMETSAFE KMRTPADSSL IKAVPGAPVA
0701: SVSCKVELGS PVRPSPMLNG GDPSKPRVDD SADKPKPWQL AEILDHAQCR QATLPDTTGS STKVVRLLYT NSGAGILALG FNGIQRLWKW VRNEQNPSGK
0801: ATAAAVPQHW QPNSGLLMTN DVSGVNLEEA NPCIALSKND SYVMSAAGGK VSLFNMMTFK VMTTFMPPPP PSSFLAFHPQ DNNIIAIGME DSTIHIYNVR
0901: VDEVKSKLKG HQKRITGLAF STTLNILVSS GADAQICFWS IDTWEKRKSV AIQMPAGKVA IGDTRVQFHV DQIRILAVHE TQLAIFDASK MECIRQWNPQ
1001: DSLSSHISSA VYACNSQLIY TTFRDGNIGV FDADTLGLRC RISPSAYLPQ GNQGLSPLVV AAHPQEPNQF AVGLNDGTVK VIEPTEAEGK WGMVPPSEAI
1101: NTSTSTTSNQ TPEQLQR
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
Arabidopsis Description
TPR3TOPLESS-related 3 [Source:UniProtKB/TrEMBL;Acc:F4K2T3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.