Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33863 | Soybean | cytosol | 21.91 | 90.18 |
| Solyc01g100050.2.1 | Tomato | nucleus | 83.66 | 83.66 |
| KRG92932 | Soybean | nucleus | 83.39 | 83.54 |
| PGSC0003DMT400063603 | Potato | cytosol | 83.3 | 83.3 |
| KRG96753 | Soybean | endoplasmic reticulum | 82.51 | 82.65 |
| KRH68470 | Soybean | nucleus | 82.51 | 82.65 |
| KRH33861 | Soybean | cytosol | 60.51 | 81.35 |
| Bra020567.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 73.94 | 78.52 |
| CDX80607 | Canola | cytosol | 77.21 | 78.25 |
| CDY25010 | Canola | cytosol | 76.68 | 78.06 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 76.5 | 77.95 |
| CDX88252 | Canola | cytosol | 75.8 | 77.37 |
| Bra009930.1-P | Field mustard | cytosol | 73.23 | 76.83 |
| AT5G27030.2 | Thale cress | cytosol, endoplasmic reticulum | 76.59 | 76.45 |
| VIT_16s0039g02410.t01 | Wine grape | cytosol | 64.4 | 64.23 |
| VIT_11s0016g05620.t01 | Wine grape | cytosol | 62.72 | 62.72 |
| VIT_09s0002g08370.t01 | Wine grape | cytosol | 62.9 | 62.57 |
| VIT_09s0002g07020.t01 | Wine grape | cytosol | 61.31 | 60.98 |
| VIT_04s0008g06380.t01 | Wine grape | cytosol | 9.19 | 57.78 |
| KRH30800 | Soybean | mitochondrion | 16.61 | 57.67 |
| VIT_04s0008g06340.t01 | Wine grape | cytosol | 7.95 | 52.33 |
| VIT_04s0008g06350.t01 | Wine grape | cytosol | 6.18 | 52.24 |
| VIT_04s0008g06330.t01 | Wine grape | extracellular | 49.03 | 48.81 |
| VIT_04s0008g06360.t01 | Wine grape | cytosol | 3.09 | 45.45 |
| VIT_04s0008g06400.t01 | Wine grape | mitochondrion | 7.95 | 44.34 |
| VIT_04s0008g06390.t01 | Wine grape | extracellular | 8.57 | 44.29 |
| VIT_04s0008g06370.t01 | Wine grape | cytosol | 10.07 | 32.02 |
Protein Annotations
| EntrezGene:100261303 | wikigene:100261303 | MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | ProteinID:CBI39553 |
| ProteinID:CBI39553.3 | InterPro:CTLH_C | ncoils:Coil | UniProt:D7U9Y9 | EMBL:FN596746 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010072 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 |
| InterPro:IPR017986 | EntrezGene:LOC100261303 | wikigene:LOC100261303 | InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 |
| InterPro:Quino_amine_DH_bsu | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50969 |
| SUPFAM:SSF50978 | SUPFAM:SSF50998 | InterPro:Topless_fam | UniParc:UPI00015C92DB | ArrayExpress:VIT_14s0060g01680 | EnsemblPlantsGene:VIT_14s0060g01680 |
| EnsemblPlants:VIT_14s0060g01680.t01 | unigene:Vvi.27 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | RefSeq:XP_002283157 | RefSeq:XP_002283157.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr14:-:1379098..1391140
Molecular Weight (calculated)
124820.0 Da
IEP (calculated)
7.122
GRAVY (calculated)
-0.261
Length
1132 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLEEEK FKESVHKLEK ESGFFFNMKY FEEKVQAGEW DEVEKYLSGY TKVDDNRYSM KIFFEIRKQK YLEALDRQDK AKAVEILVTD
0101: LRVFSTFNED LYKEITQLLT LGNFRENEQL SKYGDTKTAR SIMLIELKKL IEANPLFRDK LVFPTLKSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAPSNGA LGATPVNLPV AAVAKPAAFT SLGTHGPFPP AAAAANASAL AGWMANAAAS STVQASVVTA SSMPMPPNQV SILKRPITPP ATLGMVDYQN
0301: LEQEQLMKRL RLAQNVEEVT YPASRQQASW SLDDLPRMVA FTMQQGSTVT SMDFHPSHHT LLLVGSGNGD ITLWEVALRE RLVTKQFKIW DVTACSLPVQ
0401: ASIAKDASIP VSRVAWSPDG NFIGVAFTKH LIHLYAYTGS NELRQHLEID AHVGCVNDIA FAHPNKQLCV VTCGDDKLIK VWDMNGRKLF NFEGHEAPVY
0501: SICPHHKESI QFIFSTAMDG KIKAWLYDNI GSRVDYDAPG LWCTTMLYSA DGSRLFSCGT SKDGDSFLVE WNESEGAIKR TYNGFRKKSA GVVQFDTTQN
0601: HFLAAGEDNQ IKFWDMDNVN VLASIDADGG LPSVPRLRFN KEGNLLAVTT ADNGFKILAT AAGLRSLRAI ETPSFEALRT PVEASALKVA GTSATAANIS
0701: PNEPKVERSS PIKPSSILNG VDTAARSTEK PRSLEDVTDR SKPWQLAEIV EPGQCRQVTM SDNSDSSSKV SRLLYTNSGV GILALGSNGV QKLWKWFRND
0801: QNPSGKATSN VVPQHWQPNS GLLMTNDVSG VNPEEAVPCI ALSKNDSYVM SACGGKVSLF NMMTFKVMTT FMSPPPASTF LAFHPQDNNI IAIGMEDSTI
0901: HIYNVRVDEV KSKLKGHQKR VTGLAFSTSL NILVSSGADA QLCMWSIDTW EKRKSVSIQM PAGKAPIGDT RVQFHSDQIR LLVFHETQLA TYDASKMERI
1001: RQWIPQDGLS APISYAAYSC NSQLIYATFC DGNIGVFDAD SLRLRCRIAP SAYLSQAGLN GSQPPYPVVV ASHPQESNQL AVGLTDGSVK VIEPPESEGK
1101: WGVSPPAENG ILITRTASSS TTSNHTPDQI QR
0101: LRVFSTFNED LYKEITQLLT LGNFRENEQL SKYGDTKTAR SIMLIELKKL IEANPLFRDK LVFPTLKSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAPSNGA LGATPVNLPV AAVAKPAAFT SLGTHGPFPP AAAAANASAL AGWMANAAAS STVQASVVTA SSMPMPPNQV SILKRPITPP ATLGMVDYQN
0301: LEQEQLMKRL RLAQNVEEVT YPASRQQASW SLDDLPRMVA FTMQQGSTVT SMDFHPSHHT LLLVGSGNGD ITLWEVALRE RLVTKQFKIW DVTACSLPVQ
0401: ASIAKDASIP VSRVAWSPDG NFIGVAFTKH LIHLYAYTGS NELRQHLEID AHVGCVNDIA FAHPNKQLCV VTCGDDKLIK VWDMNGRKLF NFEGHEAPVY
0501: SICPHHKESI QFIFSTAMDG KIKAWLYDNI GSRVDYDAPG LWCTTMLYSA DGSRLFSCGT SKDGDSFLVE WNESEGAIKR TYNGFRKKSA GVVQFDTTQN
0601: HFLAAGEDNQ IKFWDMDNVN VLASIDADGG LPSVPRLRFN KEGNLLAVTT ADNGFKILAT AAGLRSLRAI ETPSFEALRT PVEASALKVA GTSATAANIS
0701: PNEPKVERSS PIKPSSILNG VDTAARSTEK PRSLEDVTDR SKPWQLAEIV EPGQCRQVTM SDNSDSSSKV SRLLYTNSGV GILALGSNGV QKLWKWFRND
0801: QNPSGKATSN VVPQHWQPNS GLLMTNDVSG VNPEEAVPCI ALSKNDSYVM SACGGKVSLF NMMTFKVMTT FMSPPPASTF LAFHPQDNNI IAIGMEDSTI
0901: HIYNVRVDEV KSKLKGHQKR VTGLAFSTSL NILVSSGADA QLCMWSIDTW EKRKSVSIQM PAGKAPIGDT RVQFHSDQIR LLVFHETQLA TYDASKMERI
1001: RQWIPQDGLS APISYAAYSC NSQLIYATFC DGNIGVFDAD SLRLRCRIAP SAYLSQAGLN GSQPPYPVVV ASHPQESNQL AVGLTDGSVK VIEPPESEGK
1101: WGVSPPAENG ILITRTASSS TTSNHTPDQI QR
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
Arabidopsis Description
TPR3TOPLESS-related 3 [Source:UniProtKB/TrEMBL;Acc:F4K2T3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.