Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 98.83 | 98.92 |
| Bra020567.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 94.06 | 98.12 |
| CDX80607 | Canola | cytosol | 91.46 | 91.05 |
| CDX88252 | Canola | cytosol | 89.48 | 89.72 |
| AT5G27030.2 | Thale cress | cytosol, endoplasmic reticulum | 89.66 | 87.92 |
| KRH33863 | Soybean | cytosol | 20.68 | 83.64 |
| VIT_14s0060g01680.t01 | Wine grape | cytosol | 78.06 | 76.68 |
| Solyc01g100050.2.1 | Tomato | nucleus | 77.43 | 76.06 |
| KRG92932 | Soybean | nucleus | 77.07 | 75.84 |
| PGSC0003DMT400063603 | Potato | cytosol | 77.16 | 75.8 |
| KRG96753 | Soybean | endoplasmic reticulum | 76.71 | 75.49 |
| KRH68470 | Soybean | nucleus | 76.35 | 75.13 |
| KRH33861 | Soybean | cytosol | 55.4 | 73.16 |
| CDY67912 | Canola | cytosol | 37.68 | 70.54 |
| Os01t0254100-01 | Rice | nucleus | 70.41 | 69.35 |
| KXG32191 | Sorghum | cytosol | 69.78 | 68.98 |
| Zm00001d040279_P012 | Maize | cytosol | 69.51 | 68.71 |
| TraesCS3D01G179800.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.51 | 68.05 |
| CDX95900 | Canola | cytosol | 69.51 | 68.05 |
| TraesCS3B01G204200.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.33 | 67.87 |
| CDX92100 | Canola | cytosol | 69.06 | 67.84 |
| TraesCS3A01G173300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.24 | 67.78 |
| GSMUA_Achr11P... | Banana | cytosol | 68.44 | 67.05 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 70.32 | 65.55 |
| CDY50500 | Canola | cytosol | 28.69 | 63.17 |
| CDY53312 | Canola | cytosol | 60.97 | 61.86 |
| CDX79383 | Canola | cytosol | 62.23 | 61.79 |
| CDX67950 | Canola | cytosol | 62.41 | 61.74 |
| CDY36584 | Canola | cytosol | 61.87 | 61.54 |
| CDX81729 | Canola | cytosol | 61.51 | 61.24 |
| CDY33387 | Canola | cytosol | 61.51 | 61.18 |
| CDY50502 | Canola | cytosol, plastid | 69.42 | 60.69 |
| CDY20161 | Canola | cytosol | 60.97 | 59.84 |
| CDY21881 | Canola | cytosol | 60.88 | 59.75 |
| CDY04683 | Canola | mitochondrion | 6.65 | 59.68 |
| CDX82426 | Canola | cytosol | 60.61 | 59.49 |
| CDX75851 | Canola | cytosol | 60.43 | 59.31 |
| KRH30800 | Soybean | mitochondrion | 16.64 | 56.75 |
| Zm00001d008338_P001 | Maize | cytosol | 57.19 | 45.72 |
| CDX79301 | Canola | cytosol | 6.65 | 34.1 |
| CDX83225 | Canola | cytosol | 19.78 | 29.41 |
| CDY38509 | Canola | cytosol | 20.23 | 29.37 |
| CDY12727 | Canola | golgi | 8.9 | 28.53 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078GET1 | UniProt:A0A078GET1 | EnsemblPlants:CDY25010 |
| ProteinID:CDY25010 | ProteinID:CDY25010.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00028830001 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 |
| PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 |
| SUPFAM:SSF50978 | InterPro:Topless_fam | UniParc:UPI0004EDBC22 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
BnaC02g39980DBnaC02g39980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GET1]
Coordinates
chrLK032167:-:258400..265261
Molecular Weight (calculated)
123118.0 Da
IEP (calculated)
7.712
GRAVY (calculated)
-0.263
Length
1112 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRQDK AKAVEILVQD
0101: LRVFSTFNED LYKEITQLLT LQNFRENDQL SKYGDTKTAR TVMLSEVKKL IEANPLFRDK LTFPALRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAVPNGP LAPSSVNQPV TTLTKPAAFP PLGAHGPFPP GGAVAAANAG ALASWMAAAS GASAVQAAVV TPAPMPLPMN QVAILKRPRT PPATPSIVDY
0301: QNPDHELMKR LRPAPSVEEV TYPAPRQQAL WSPEDLPLKV ALALHQGSTV TSMEFHPMQN TLLLVGSATG EITLWELAVR EKLVTRPFKV WDMTNCTNQF
0401: QALIAKETPI SVTRVAWSPD GNFIGVAYSK HLVHLYAFSG PNDLRQHAEI DAHMGAVNDL AFAIPNRQLC VVTCGDDKLI KVWDLQGRKH FTFEGHETPV
0501: YSICPHHKEN IQFIFSTAID GKIKAWLYDN MGSRVDYDAP GKWCTTMLYS ADGSRLFSCG TSKDGDFFLV EWNESEGSIK RTYLGFHKKL AGVVQFDTSK
0601: NHFLAVGEDG QIKFWDMDNI NVLTSTDAEG GLPALPRLRF NREGNLLAVS TAENGFKILA NTAGFRSLRA MEASAFETMR NPVDSSLTKA VPGASVSCKI
0701: ERGSPVRPSP MLNGVDPSKP RIIDDSTDKP RPWQLAEIMD PAQCRKATLP DTAGSSTKVV RLLYTNSGAG IVALGLNGIQ RLWKWVRSEQ NPSGKATTAV
0801: VPQQWQPNSG LLMANDVSGV NLEESNPCIA LSKNDSYVMS AAGGKVSLFN MMTFKVMTTF MQPPPASTFL AFHPQDNNII AIGMEDSTIH IYNVRVDEVK
0901: SKLKGHQKRI TGLAFSTTLN ILVSSGADAQ ICFWSIDTWE KRKSVAIQMP AGKAANGDTR VQFHVDQIRI LAVHETQLAI FDASKMECIR QWIPQDSLSA
1001: PISSAVYACN SQLIYTTFRD GNIGVFDADT LRLRCRISPS AYLPQGNQGL SPLVVAAHPQ EPNQFAVGLN DGSVKVIEPT EAEGKWGMVP PSEAIKTSPS
1101: TTNNQTQEQL QR
0101: LRVFSTFNED LYKEITQLLT LQNFRENDQL SKYGDTKTAR TVMLSEVKKL IEANPLFRDK LTFPALRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAVPNGP LAPSSVNQPV TTLTKPAAFP PLGAHGPFPP GGAVAAANAG ALASWMAAAS GASAVQAAVV TPAPMPLPMN QVAILKRPRT PPATPSIVDY
0301: QNPDHELMKR LRPAPSVEEV TYPAPRQQAL WSPEDLPLKV ALALHQGSTV TSMEFHPMQN TLLLVGSATG EITLWELAVR EKLVTRPFKV WDMTNCTNQF
0401: QALIAKETPI SVTRVAWSPD GNFIGVAYSK HLVHLYAFSG PNDLRQHAEI DAHMGAVNDL AFAIPNRQLC VVTCGDDKLI KVWDLQGRKH FTFEGHETPV
0501: YSICPHHKEN IQFIFSTAID GKIKAWLYDN MGSRVDYDAP GKWCTTMLYS ADGSRLFSCG TSKDGDFFLV EWNESEGSIK RTYLGFHKKL AGVVQFDTSK
0601: NHFLAVGEDG QIKFWDMDNI NVLTSTDAEG GLPALPRLRF NREGNLLAVS TAENGFKILA NTAGFRSLRA MEASAFETMR NPVDSSLTKA VPGASVSCKI
0701: ERGSPVRPSP MLNGVDPSKP RIIDDSTDKP RPWQLAEIMD PAQCRKATLP DTAGSSTKVV RLLYTNSGAG IVALGLNGIQ RLWKWVRSEQ NPSGKATTAV
0801: VPQQWQPNSG LLMANDVSGV NLEESNPCIA LSKNDSYVMS AAGGKVSLFN MMTFKVMTTF MQPPPASTFL AFHPQDNNII AIGMEDSTIH IYNVRVDEVK
0901: SKLKGHQKRI TGLAFSTTLN ILVSSGADAQ ICFWSIDTWE KRKSVAIQMP AGKAANGDTR VQFHVDQIRI LAVHETQLAI FDASKMECIR QWIPQDSLSA
1001: PISSAVYACN SQLIYTTFRD GNIGVFDADT LRLRCRISPS AYLPQGNQGL SPLVVAAHPQ EPNQFAVGLN DGSVKVIEPT EAEGKWGMVP PSEAIKTSPS
1101: TTNNQTQEQL QR
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
Arabidopsis Description
TPR3TOPLESS-related 3 [Source:UniProtKB/TrEMBL;Acc:F4K2T3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.