CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33861	Soybean	cytosol	62.27	24.11
KRH68470	Soybean	nucleus	69.02	19.91
KRG96753	Soybean	endoplasmic reticulum	67.18	19.38
KRG92932	Soybean	nucleus	65.34	18.85
Bra020567.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.75	17.35
Bra009930.1-P	Field mustard	cytosol	57.06	17.24
PGSC0003DMT400063603	Potato	cytosol	58.59	16.87
Solyc01g100050.2.1	Tomato	nucleus	58.59	16.87
CDX88252	Canola	cytosol	57.36	16.86
CDY05552	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.75	16.65
CDX80607	Canola	cytosol	57.06	16.65
CDY25010	Canola	cytosol	56.75	16.64
VIT_14s0060g01680.t01	Wine grape	cytosol	57.67	16.61
AT5G27030.2	Thale cress	cytosol, endoplasmic reticulum	55.21	15.87
Zm00001d040279_P012	Maize	cytosol	53.99	15.64
KXG32191	Sorghum	cytosol	53.68	15.56
Os01t0254100-01	Rice	nucleus	53.68	15.5
TraesCS3B01G204200.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.68	15.4
TraesCS3D01G179800.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.68	15.4
TraesCS3A01G173300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.37	15.32
KRH20137	Soybean	endoplasmic reticulum	52.45	15.09
KRH03669	Soybean	nucleus	52.45	15.08
GSMUA_Achr2P00320_001	Banana	cytosol	53.37	14.59
KRH44501	Soybean	cytosol	50.31	14.47
GSMUA_Achr11P...	Banana	cytosol	50.0	14.36
KRH23604	Soybean	endoplasmic reticulum	48.77	14.05
KRH09700	Soybean	cytosol	48.47	13.98
KRH47407	Soybean	cytosol	47.85	13.81
KRH52398	Soybean	cytosol	38.04	11.76
KRH61732	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.04	11.7
Zm00001d008338_P001	Maize	cytosol	46.63	10.93
KRH05196	Soybean	cytosol	7.98	4.79
KRH33863	Soybean	cytosol	3.37	4.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A0R0HK59	EMBL:ACUP02007074	EnsemblPlantsGene:GLYMA_11G207100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680	InterPro:IPR015943	EnsemblPlants:KRH30800	ProteinID:KRH30800
ProteinID:KRH30800.1	PFscan:PS50082	PANTHER:PTHR44083	PANTHER:PTHR44083:SF3	SMART:SM00320	SUPFAM:SSF50978
InterPro:Topless_fam	UniParc:UPI0006ED50C1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:29391387..29403012

Molecular Weight (calculated)

35862.1 Da

IEP (calculated)

5.129

GRAVY (calculated)

-0.431

Length

326 amino acids

Sequence
(BLAST)

001: MKPHPLHYRK PTIPYPISVS AHSESFPKTT IELEKNEKND IFEGHEATVY SVCPHHKESI QFIFSTAIDG KIKAWLYDNM GSRVDYDAPG HWCTTMLYSA
101: DGSRPFSCGI SKDGESFLVE WNESEGPLRE HAMGSEINPL FDITQNQFLA AGEDGQVKFW DMDNINLLTS TDAEDKGFKI LANANGLRSL RTVETPRFEA
201: LRSPIESSVV KASGSSAVNV SPVNCKVEKG SPVRPSPILN EVDTTSQNAE KTRTVEDGVD RAKPWQLSEI VDVGVLALGS NGIQKLWKWA CSEKNLNGKG
301: TYVEGMKEEV VLSPGHALSF IAAGEG

Best Arabidopsis Sequence Match ( AT1G80490.2 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR

Arabidopsis Description

TPR1Topless-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.