Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
endoplasmic reticulum: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH03669 | Soybean | nucleus | 98.94 | 98.85 |
VIT_11s0016g05620.t01 | Wine grape | cytosol | 86.94 | 87.01 |
PGSC0003DMT400079377 | Potato | cytosol | 79.79 | 79.72 |
Solyc07g008040.2.1 | Tomato | nucleus | 76.88 | 79.4 |
KRH33863 | Soybean | cytosol | 18.53 | 76.36 |
KRH23604 | Soybean | endoplasmic reticulum | 75.99 | 76.06 |
KRH44501 | Soybean | cytosol | 75.46 | 75.46 |
KRH47407 | Soybean | cytosol | 75.02 | 75.22 |
KRH09700 | Soybean | cytosol | 73.79 | 73.98 |
Bra028653.1-P | Field mustard | mitochondrion | 72.55 | 67.21 |
KRH68470 | Soybean | nucleus | 63.2 | 63.36 |
KRG92932 | Soybean | nucleus | 63.11 | 63.27 |
KRG96753 | Soybean | endoplasmic reticulum | 62.75 | 62.92 |
Bra006005.1-P | Field mustard | cytosol | 58.87 | 62.1 |
KRH33861 | Soybean | cytosol | 44.04 | 59.26 |
Bra006006.1-P | Field mustard | cytosol | 48.28 | 55.87 |
KRH30800 | Soybean | mitochondrion | 15.09 | 52.45 |
KRH61732 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.63 | 48.77 |
KRH52398 | Soybean | cytosol | 45.01 | 48.39 |
KRH05196 | Soybean | cytosol | 22.24 | 46.41 |
AT2G25420.4 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 22.68 | 34.4 |
CDX83225 | Canola | cytosol | 22.42 | 33.96 |
CDY38509 | Canola | cytosol | 22.86 | 33.81 |
Protein Annotations
EntrezGene:100799941 | MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | EMBL:ACUP02008240 | InterPro:CTLH_C |
EnsemblPlantsGene:GLYMA_13G158800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001680 | InterPro:IPR006594 |
InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:K7M027 | EnsemblPlants:KRH20137 | ProteinID:KRH20137 |
ProteinID:KRH20137.1 | InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF4 | SMART:SM00320 | SMART:SM00667 |
SMART:SM00668 | SUPFAM:SSF50978 | SUPFAM:SSF75011 | InterPro:Topless_fam | UniParc:UPI000296A415 | InterPro:WD40/YVTN_repeat-like_dom_sf |
InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:-:27394635..27402118
Molecular Weight (calculated)
124756.0 Da
IEP (calculated)
7.060
GRAVY (calculated)
-0.285
Length
1133 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMRY FEDMVTNGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKQDR AKAVDILVKD
0101: LKVFAAFNEE LFKEITQLLT LDNFRHNEQL SKYGDTKSAR GIMLAELKKL IEANPLFRDK LQFPTLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGQPNGA RAPSPVTNPL MGAVPKAGGF PPLGAHGPFQ PTPAALPTSL AGWMANPSPV PHPSASAGPI GLAAANNAAA ILKRPRTPPT NNPAMDYQTA
0301: DSDHVLKRTR PFGLSDEVSN LPVNLLPVAY SGQSHGQSSY SSDDLPKTIV MTLNQGSIVK SMDFHPLQQI LLLVGTNMGD VMVWDIGSRE RIAQRNFKVW
0401: ELGSCSVALQ ASLSNDYSAS VNRVVWSPDG TLCSVAYSKH IVHIYSYQGG DDLRNHLEIE AHAGSVNDLA FSYPNKQLCV VTCGEDRVIK VWDAVTGAKQ
0501: YTFEGHEAPV YSVCPHHKES IQFIFSTATD GKIKAWLYDN MGSRVDYDAP GHSSTTMAYS ADGTRLFSCG TNKEGESFLV EWNESEGAVK RTYHGLGKRS
0601: VGVVQFDTTK NRFLAAGDEF MIKFWDMDNT NMLTSVEADG GLLASPCIRF NKDGILLAVS TNDSGVKILA NAEGIRLLRT VENRTFDASR VASAAVVKAP
0701: TIGAFPSTNV TVGTSLADRA PPVAAMVGIN NDTRNLADVK PRIVDEAVEK SRIWKLTEIN EPSQCRSLKL PDSLSSMRVS RLIYTNQGVA ILALAANAVH
0801: KLWKWQRNER NTTGKATASI QPQLWQPSSG ILMTNDISDT NPEDAVSCFA LSKNDSYVMS ASGGKISLFN MMTFKTMTTF MPPPPAATFL AFHPQDNNII
0901: AIGMEDSSIQ IYNVRVDEVK TKLKGHQKRI TGLAFSHVLN VLVSSGADSQ LCVWSTDGWE KQASKFLQMP SGRPPAPLAD TRVQFHLDQT HLLAVHETQI
1001: ALYEAPKLEC IKQFSPREAN PITHATYSCD SQSIYVSFED GSIGILTVPA LRLRCRINQS AYLHPNPSLR VHPLVIAAHP SEPNQFALGL TDGGVHVLEP
1101: LEAEGKWGTP PPNENGAGPS TTSGAAVSEQ TQR
0101: LKVFAAFNEE LFKEITQLLT LDNFRHNEQL SKYGDTKSAR GIMLAELKKL IEANPLFRDK LQFPTLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGQPNGA RAPSPVTNPL MGAVPKAGGF PPLGAHGPFQ PTPAALPTSL AGWMANPSPV PHPSASAGPI GLAAANNAAA ILKRPRTPPT NNPAMDYQTA
0301: DSDHVLKRTR PFGLSDEVSN LPVNLLPVAY SGQSHGQSSY SSDDLPKTIV MTLNQGSIVK SMDFHPLQQI LLLVGTNMGD VMVWDIGSRE RIAQRNFKVW
0401: ELGSCSVALQ ASLSNDYSAS VNRVVWSPDG TLCSVAYSKH IVHIYSYQGG DDLRNHLEIE AHAGSVNDLA FSYPNKQLCV VTCGEDRVIK VWDAVTGAKQ
0501: YTFEGHEAPV YSVCPHHKES IQFIFSTATD GKIKAWLYDN MGSRVDYDAP GHSSTTMAYS ADGTRLFSCG TNKEGESFLV EWNESEGAVK RTYHGLGKRS
0601: VGVVQFDTTK NRFLAAGDEF MIKFWDMDNT NMLTSVEADG GLLASPCIRF NKDGILLAVS TNDSGVKILA NAEGIRLLRT VENRTFDASR VASAAVVKAP
0701: TIGAFPSTNV TVGTSLADRA PPVAAMVGIN NDTRNLADVK PRIVDEAVEK SRIWKLTEIN EPSQCRSLKL PDSLSSMRVS RLIYTNQGVA ILALAANAVH
0801: KLWKWQRNER NTTGKATASI QPQLWQPSSG ILMTNDISDT NPEDAVSCFA LSKNDSYVMS ASGGKISLFN MMTFKTMTTF MPPPPAATFL AFHPQDNNII
0901: AIGMEDSSIQ IYNVRVDEVK TKLKGHQKRI TGLAFSHVLN VLVSSGADSQ LCVWSTDGWE KQASKFLQMP SGRPPAPLAD TRVQFHLDQT HLLAVHETQI
1001: ALYEAPKLEC IKQFSPREAN PITHATYSCD SQSIYVSFED GSIGILTVPA LRLRCRINQS AYLHPNPSLR VHPLVIAAHP SEPNQFALGL TDGGVHVLEP
1101: LEAEGKWGTP PPNENGAGPS TTSGAAVSEQ TQR
0001: MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFFFNMRY FEDSVTAGEW DDVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKKDH AKAVDILVKE
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHTCGHPNGA HTPSPTTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVQ HPTVSAGPIG LGAPNSAVSM LKRERPRSPP TNSLSMDYQT
0301: ADSESVLKRP RPFGISDGVN NLPVNVLPVT YPGQSHAHAT YSTDDLPKNV SRILSQGSAI KSMDFHPVQQ TMLLVGTNLG DIAIWEVGSR EKLVSRSFKV
0401: WDLATCTVNL QASLASEYTA AVNRVVWSPD GGLLGVAYSK HIVHIYSYHG GEDLRNHLEI DAHAGNVNDL AFSQPNQQLC VVTCGEDKTI KVWDAVTGNK
0501: LHTFEGHEAP VYSVCPHQKE NIQFIFSTAV DGKIKAWLYD NMGSRVDYDA PGRSCTSMAY CADGTRLFSC GTSKEGESFI VEWNESEGAV KRTYLGLGKR
0601: SVGVVQFDTM KNKFLVAGDE FQVKFWDMDS VDLLSSTAAE GGLPSSPCLR INKEGTLLAV STTDNGIKIL ANAEGSRILH SMANRGLDSS RAPPGSVAKG
0701: PIVGTFGTPN SSTGMSLSMG ERSGPVASVT GLNGDNRSLP DVKPRIADDA EKSKTWKLTE ISERSQLRTL RLPDTLLPAR VVKLIYTNSG GAILALAENA
0801: AHKLWKWQKS ERNLLGKANS NVPPQLWQPS SGVLMTNDTR EGNKEDVVPC FALSKNDSYV MSASGGKISL FNMMTFKTMT TFMAPPPAAT SLAFHPQDNN
0901: IIAIGMDDSS IQIYNVRVDE VKSKLKGHQK RVTGLAFSNV LNVLVSSGAD SQLCVWSMDG WEKQASKQIQ IPSGHSPNPL AHTRVQFHQD QIHVLVVHAS
1001: QLAIYEAPKL ENMKQWIPKE SSGSVTDAVY SCDSQSIYAA FDDGSVSILT ATTLQLKCRI GPNSYLPSNP SSRVYPATVA AHPSEPNQFA VGLTDGGVHV
1101: IEPPGPEGKW GISAPPENGA GPSVSSAPGS DQQPSDS
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHTCGHPNGA HTPSPTTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVQ HPTVSAGPIG LGAPNSAVSM LKRERPRSPP TNSLSMDYQT
0301: ADSESVLKRP RPFGISDGVN NLPVNVLPVT YPGQSHAHAT YSTDDLPKNV SRILSQGSAI KSMDFHPVQQ TMLLVGTNLG DIAIWEVGSR EKLVSRSFKV
0401: WDLATCTVNL QASLASEYTA AVNRVVWSPD GGLLGVAYSK HIVHIYSYHG GEDLRNHLEI DAHAGNVNDL AFSQPNQQLC VVTCGEDKTI KVWDAVTGNK
0501: LHTFEGHEAP VYSVCPHQKE NIQFIFSTAV DGKIKAWLYD NMGSRVDYDA PGRSCTSMAY CADGTRLFSC GTSKEGESFI VEWNESEGAV KRTYLGLGKR
0601: SVGVVQFDTM KNKFLVAGDE FQVKFWDMDS VDLLSSTAAE GGLPSSPCLR INKEGTLLAV STTDNGIKIL ANAEGSRILH SMANRGLDSS RAPPGSVAKG
0701: PIVGTFGTPN SSTGMSLSMG ERSGPVASVT GLNGDNRSLP DVKPRIADDA EKSKTWKLTE ISERSQLRTL RLPDTLLPAR VVKLIYTNSG GAILALAENA
0801: AHKLWKWQKS ERNLLGKANS NVPPQLWQPS SGVLMTNDTR EGNKEDVVPC FALSKNDSYV MSASGGKISL FNMMTFKTMT TFMAPPPAAT SLAFHPQDNN
0901: IIAIGMDDSS IQIYNVRVDE VKSKLKGHQK RVTGLAFSNV LNVLVSSGAD SQLCVWSMDG WEKQASKQIQ IPSGHSPNPL AHTRVQFHQD QIHVLVVHAS
1001: QLAIYEAPKL ENMKQWIPKE SSGSVTDAVY SCDSQSIYAA FDDGSVSILT ATTLQLKCRI GPNSYLPSNP SSRVYPATVA AHPSEPNQFA VGLTDGGVHV
1101: IEPPGPEGKW GISAPPENGA GPSVSSAPGS DQQPSDS
Arabidopsis Description
WSIP2WUS-interacting protein 2 [Source:TAIR;Acc:AT3G15880]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.