CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 3
cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52398	Soybean	cytosol	92.45	92.98
KRH05196	Soybean	cytosol	28.58	55.8
KRH23604	Soybean	endoplasmic reticulum	52.64	49.29
KRH47407	Soybean	cytosol	52.45	49.2
KRH44501	Soybean	cytosol	52.55	49.16
KRH09700	Soybean	cytosol	52.26	49.03
KRH33863	Soybean	cytosol	12.36	47.64
EER92538	Sorghum	cytosol	50.47	47.56
GSMUA_Achr6P36440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.42	47.23
Os03t0254700-01	Rice	cytosol	50.47	47.22
GSMUA_Achr4P09920_001	Banana	cytosol	51.23	47.22
HORVU0Hr1G008690.1	Barley	cytosol, endoplasmic reticulum	50.28	46.92
TraesCS4D01G221200.1	Wheat	cytosol	50.19	46.91
TraesCS4A01G083300.2	Wheat	cytosol	50.19	46.87
TraesCS4B01G220900.3	Wheat	cytosol	50.09	46.74
VIT_04s0008g06330.t01	Wine grape	extracellular	49.34	46.0
KRH03669	Soybean	nucleus	49.15	45.94
KRH20137	Soybean	endoplasmic reticulum	48.77	45.63
GSMUA_Achr6P22950_001	Banana	plasma membrane	51.6	44.18
KRG92932	Soybean	nucleus	46.13	43.27
KRG96753	Soybean	endoplasmic reticulum	46.04	43.19
KRH68470	Soybean	nucleus	45.94	43.1
KRH33861	Soybean	cytosol	34.06	42.87
KRH30800	Soybean	mitochondrion	11.7	38.04
PGSC0003DMT400028457	Potato	cytosol	41.6	37.37
Solyc08g029050.2.1	Tomato	cytosol	41.32	35.87
Zm00001d050983_P001	Maize	cytosol	7.17	30.4
Zm00001d004623_P001	Maize	cytosol, plastid	7.55	29.63
Zm00001d027915_P001	Maize	cytosol	7.64	26.13
Zm00001d045829_P001	Maize	mitochondrion	7.83	25.46
CDX79301	Canola	cytosol	5.19	25.35
Zm00001d052868_P001	Maize	cytosol, peroxisome, plasma membrane	4.62	20.76

Protein Annotations

EntrezGene:100777441	MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EMBL:ACUP02002183	InterPro:CTLH_C
EnsemblPlantsGene:GLYMA_04G065000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680	InterPro:IPR006594
InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986	UniProt:K7KIH0	ProteinID:KRH61730.1	ProteinID:KRH61731.1
EnsemblPlants:KRH61732	ProteinID:KRH61732	ProteinID:KRH61732.1	InterPro:LisH	PFAM:PF00400	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR44083	PANTHER:PTHR44083:SF2
InterPro:Quino_amine_DH_bsu	SMART:SM00320	SMART:SM00667	SMART:SM00668	SUPFAM:SSF50969	SUPFAM:SSF50978
InterPro:Topless_fam	UniParc:UPI000296BFF1	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:5394966..5402183

Molecular Weight (calculated)

118409.0 Da

IEP (calculated)

6.345

GRAVY (calculated)

-0.270

Length

1060 amino acids

Sequence
(BLAST)

0001: MEKSILNKEL VFLILQFLDE EGLKETAHKL ERESGIYFDM KYFEDMLLAG KWDDSERYLS GFTRVDDNRH STKVYFEIRK QKFLEALDMD DRAKALDILI
0101: KDLKVFSSGH EELFNEMTQL LIINNIREHA SLSTYGDTNS VRKIVADDIK KVIEANPVFH GKLKCPVFKS QRLRYLLNQS LNWQHLLCKD PLPVPGVKTL
0201: LEDHVCKPSL NLSSLQSEES DSIENSDSDQ HLSNHNSGPS TITDSVPFPA TLTNPVHGLS IETTMEDPSV ISLKGRQCQT SNEVTSAIAN VLPENVVQML
0301: KEDSLPVTMD FHPIGHTLLL VGTNIGSIGL WDVNSGEKLF SENYRIWGIG ASSINFKEAQ EKDFRVSVKK IKWSPDGSLF GVAFSKHFVQ LYSYHHGNDI
0401: ISQHLQIDAH DGSVNDLAFS SLNKQLLVIT CGDDKKIKVW DAVSGVRCYT FEGHDAPVCS ICPHVKQHVD FIFSTSTDGK IKAWLYDSLG ARVDFDAPGY
0501: GYTTLAYSAD DNRLFSCGTG KDGEPYLVEW DESEGYIKRT YKGLKKPCFS AIHFDSTQKG LLAAGDGHKV KFWNMDSVEL WTSTDVDAEL LENPCIRFNK
0601: KGTLLAVAAK GNKIKILAID DILQKQNETH SIHVPNNQHE ALKCTQSPIL VDAGAGVAGE GIVMNGYQKG LEDGRYNSIE ESHNNSKFWN VSEICEPSQC
0701: QFLQLPVHPK INKIVRLTYT NAGNGILALT SNGDHLLWKW PRDNLNLDGK ATAQVSPHIW QSRSGLQLMS NKLTSSYSGV PVSCFSLSKN DSYLMSTSGG
0801: AISLFNMLTF KTVTTIMTPP PMATCLTFYP RDNNILAVGM DNYSIIIYNV RTNKIISKLE GHSKRVTALA FSSSFDLLVS GDINAQIFVW NTNEWKKQKD
0901: GSLQIHGQKV PEVLSDTHIQ FHLYQRHFLA VRSNYLAMYE AIELKCCNQW VPEVSMAISQ ATFSFDGQAV YASFVDGAVA IFDTLKLQMR CRINPSAYLS
1001: TTPSSSIYPL AIAAHPQKPS QFAVGLTDGR VIVFEPQKTG EDWSKFSLDD EAIKQGCGSE

Best Arabidopsis Sequence Match ( AT1G15750.1 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.