Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61732 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 92.98 | 92.45 |
| KRH05196 | Soybean | cytosol | 28.94 | 56.17 |
| KRH23604 | Soybean | endoplasmic reticulum | 52.37 | 48.76 |
| KRH47407 | Soybean | cytosol | 52.28 | 48.76 |
| KRH44501 | Soybean | cytosol | 52.37 | 48.72 |
| KRH09700 | Soybean | cytosol | 52.09 | 48.58 |
| KRH33863 | Soybean | cytosol | 12.43 | 47.64 |
| EER92538 | Sorghum | cytosol | 50.38 | 47.2 |
| Os03t0254700-01 | Rice | cytosol | 50.57 | 47.04 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 51.42 | 46.97 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 51.14 | 46.87 |
| HORVU0Hr1G008690.1 | Barley | cytosol, endoplasmic reticulum | 50.19 | 46.57 |
| TraesCS4D01G221200.1 | Wheat | cytosol | 50.09 | 46.56 |
| TraesCS4A01G083300.2 | Wheat | cytosol | 50.09 | 46.52 |
| TraesCS4B01G220900.3 | Wheat | cytosol | 49.91 | 46.3 |
| KRH03669 | Soybean | nucleus | 48.67 | 45.24 |
| KRH20137 | Soybean | endoplasmic reticulum | 48.39 | 45.01 |
| VIT_04s0008g06330.t01 | Wine grape | extracellular | 48.29 | 44.77 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 51.61 | 43.94 |
| KRG92932 | Soybean | nucleus | 46.2 | 43.1 |
| KRG96753 | Soybean | endoplasmic reticulum | 45.92 | 42.83 |
| KRH68470 | Soybean | nucleus | 45.64 | 42.57 |
| KRH33861 | Soybean | cytosol | 33.87 | 42.4 |
| KRH30800 | Soybean | mitochondrion | 11.76 | 38.04 |
| PGSC0003DMT400028457 | Potato | cytosol | 41.08 | 36.69 |
| Solyc08g029050.2.1 | Tomato | cytosol | 40.89 | 35.3 |
| Zm00001d050983_P001 | Maize | cytosol | 6.93 | 29.2 |
| Zm00001d004623_P001 | Maize | cytosol, plastid | 7.31 | 28.52 |
| CDX79301 | Canola | cytosol | 5.12 | 24.88 |
| Zm00001d045829_P001 | Maize | mitochondrion | 7.59 | 24.54 |
| Zm00001d027915_P001 | Maize | cytosol | 7.21 | 24.52 |
| Zm00001d052868_P001 | Maize | cytosol, peroxisome, plasma membrane | 4.36 | 19.49 |
Protein Annotations
| EntrezGene:100786908 | Gene3D:2.130.10.10 | MapMan:35.1 | EMBL:ACUP02003419 | InterPro:CTLH_C | EnsemblPlantsGene:GLYMA_06G066200 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1K8S3 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | ProteinID:KRH52397.1 | EnsemblPlants:KRH52398 | ProteinID:KRH52398 |
| ProteinID:KRH52398.1 | ProteinID:KRH52399.1 | ProteinID:KRH52400.1 | InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF2 |
| InterPro:Quino_amine_DH_bsu | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50969 | SUPFAM:SSF50978 |
| SUPFAM:SSF63829 | InterPro:Topless_fam | UniParc:UPI0002339FFD | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:5046519..5053845
Molecular Weight (calculated)
117792.0 Da
IEP (calculated)
5.887
GRAVY (calculated)
-0.292
Length
1054 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEKSSLNKEL VFLILQFLDE EGLKETAHKL ERESGIYFDM KYFEDMLLAG KWDDAERYLS GFTSVDDNRH STKVYFEIRK QKFLEALDMD DRGKALDILI
0101: KDLKVFSSGH EELFNEMTQL LIISNIREHA SLSTYGDTDS VRKIVADDIK KVIEANPVFH EKLKCPVFKS QRLRYLLNQS LNWQHLLCKD PLPVPGIKTL
0201: LEDHVCKPSL NLSSLQSEEN ESIENSDPDK HLSNNNSGPS TITDSVPFPA TLTNPETAME DPSVISLKGR PCQTSNEVTS AIANVLPENV VQIFKEDSLP
0301: VTMDFHPIGH TLLLAGTNIG SIGLWDVNSG EKLFSENYRI WGIGASSINF KEAQEKDFRV SVKKIKWNPE GSLFGVAFSK HLVQLYSYHH GNDIISQHLE
0401: IDAHDGSVND LAFSSLNEQL LVITCGDDKK IKVWDTVSGV RCYTFEGHDA PVCSICPHVK QQIHFIFSTS TDGKIKAWLY DSLGARVDFD APGYGYTALA
0501: YSADDKRLFS CGTGKDGEPY LVEWDESEGY IKRTYKGLKK PCFSAIHFDS TQKGLLAAGD GHKVKFWNMD SVELWTSTDV DAELLENPCI RFNKKGTLLA
0601: VAAKENKIKI LAIDDILQKQ NEIRSIHVPN NQHETLKCTE SPILVDAGAG VADEGIVMNG CQKGSEDGRS NSIEDSHNKS KFWNVSEICE PSQCQFLQLP
0701: VHPKISKIVR LAYTNAGCGI LALASNGDHL LWQWPRDSLN LDGKATAQFS PHICRSRSGL QLMSNKLTSS YSGNPVSCFS LSKNDSYLMS TSGEAISLFN
0801: MLTFKTVTTI MTPPPMATCL SFYPRDNNIL AIGMDNYSII IYNVRTNKII SKLEGHSKRV TALAFSSSFD LLVSGDINAQ IFVWNTNGWE KQKDGYLQIH
0901: GQKVPEILSD THIQFHPYQR HFLAVRSNYL AMHEATELKC CNQWVPEVSM VISQATFSSD GQAVYASFVD GTVGIFDTLK LQMHCRVNPS AYLSTTPSSS
1001: IYPLAIAAHP QKPSQFAVGL TDGRVIVFEP QKPGEDWSKF SLDDNEVINT GLWE
0101: KDLKVFSSGH EELFNEMTQL LIISNIREHA SLSTYGDTDS VRKIVADDIK KVIEANPVFH EKLKCPVFKS QRLRYLLNQS LNWQHLLCKD PLPVPGIKTL
0201: LEDHVCKPSL NLSSLQSEEN ESIENSDPDK HLSNNNSGPS TITDSVPFPA TLTNPETAME DPSVISLKGR PCQTSNEVTS AIANVLPENV VQIFKEDSLP
0301: VTMDFHPIGH TLLLAGTNIG SIGLWDVNSG EKLFSENYRI WGIGASSINF KEAQEKDFRV SVKKIKWNPE GSLFGVAFSK HLVQLYSYHH GNDIISQHLE
0401: IDAHDGSVND LAFSSLNEQL LVITCGDDKK IKVWDTVSGV RCYTFEGHDA PVCSICPHVK QQIHFIFSTS TDGKIKAWLY DSLGARVDFD APGYGYTALA
0501: YSADDKRLFS CGTGKDGEPY LVEWDESEGY IKRTYKGLKK PCFSAIHFDS TQKGLLAAGD GHKVKFWNMD SVELWTSTDV DAELLENPCI RFNKKGTLLA
0601: VAAKENKIKI LAIDDILQKQ NEIRSIHVPN NQHETLKCTE SPILVDAGAG VADEGIVMNG CQKGSEDGRS NSIEDSHNKS KFWNVSEICE PSQCQFLQLP
0701: VHPKISKIVR LAYTNAGCGI LALASNGDHL LWQWPRDSLN LDGKATAQFS PHICRSRSGL QLMSNKLTSS YSGNPVSCFS LSKNDSYLMS TSGEAISLFN
0801: MLTFKTVTTI MTPPPMATCL SFYPRDNNIL AIGMDNYSII IYNVRTNKII SKLEGHSKRV TALAFSSSFD LLVSGDINAQ IFVWNTNGWE KQKDGYLQIH
0901: GQKVPEILSD THIQFHPYQR HFLAVRSNYL AMHEATELKC CNQWVPEVSM VISQATFSSD GQAVYASFVD GTVGIFDTLK LQMHCRVNPS AYLSTTPSSS
1001: IYPLAIAAHP QKPSQFAVGL TDGRVIVFEP QKPGEDWSKF SLDDNEVINT GLWE
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.