Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68470 | Soybean | nucleus | 95.22 | 95.22 |
| KRH33863 | Soybean | cytosol | 22.83 | 93.82 |
| KRG92932 | Soybean | nucleus | 89.73 | 89.73 |
| KRH33861 | Soybean | cytosol | 65.58 | 88.0 |
| Solyc01g100050.2.1 | Tomato | nucleus | 83.27 | 83.13 |
| PGSC0003DMT400063603 | Potato | cytosol | 82.92 | 82.77 |
| VIT_14s0060g01680.t01 | Wine grape | cytosol | 82.65 | 82.51 |
| CDX80607 | Canola | cytosol | 76.73 | 77.62 |
| Bra020567.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.74 | 77.11 |
| CDY25010 | Canola | cytosol | 75.49 | 76.71 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 75.22 | 76.51 |
| CDX88252 | Canola | cytosol | 75.04 | 76.47 |
| Bra009930.1-P | Field mustard | cytosol | 72.83 | 76.27 |
| AT5G27030.2 | Thale cress | cytosol, endoplasmic reticulum | 76.11 | 75.84 |
| Os01t0254100-01 | Rice | nucleus | 73.54 | 73.61 |
| KXG32191 | Sorghum | cytosol | 73.19 | 73.51 |
| Zm00001d040279_P012 | Maize | cytosol | 72.92 | 73.24 |
| TraesCS3D01G179800.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.48 | 72.1 |
| TraesCS3B01G204200.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.39 | 72.01 |
| TraesCS3A01G173300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.21 | 71.83 |
| GSMUA_Achr11P... | Banana | cytosol | 71.68 | 71.37 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 74.51 | 70.58 |
| KRH30800 | Soybean | mitochondrion | 19.38 | 67.18 |
| KRH44501 | Soybean | cytosol | 63.1 | 62.93 |
| KRH23604 | Soybean | endoplasmic reticulum | 63.01 | 62.9 |
| KRH47407 | Soybean | cytosol | 62.83 | 62.83 |
| KRH03669 | Soybean | nucleus | 63.01 | 62.79 |
| KRH20137 | Soybean | endoplasmic reticulum | 62.92 | 62.75 |
| KRH09700 | Soybean | cytosol | 61.68 | 61.68 |
| Zm00001d008338_P001 | Maize | cytosol | 58.76 | 47.74 |
| KRH61732 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.19 | 46.04 |
| KRH52398 | Soybean | cytosol | 42.83 | 45.92 |
| KRH05196 | Soybean | cytosol | 21.15 | 44.01 |
Protein Annotations
| EntrezGene:100808421 | MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | EMBL:ACUP02012162 | InterPro:CTLH_C |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_19G230500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1NBT8 |
| InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | EnsemblPlants:KRG96753 |
| ProteinID:KRG96753 | ProteinID:KRG96753.1 | InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 | InterPro:Quinoprotein_ADH-like_supfam |
| SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50978 | SUPFAM:SSF50998 | InterPro:Topless_fam |
| UniParc:UPI00023DE813 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:48121961..48130809
Molecular Weight (calculated)
124220.0 Da
IEP (calculated)
7.319
GRAVY (calculated)
-0.208
Length
1130 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTSLSRELVF LILQFLEEEK LKESVHKLEK ESGFFFNMKY FEEKVQAGEW EEVEKYLTGF TKVDDNRYSM KIFFEIRKQK YLEALDRQDK AKAVEILVGD
0101: LKVFSTFNEE LYKEITQLLT LSNFRENEQL SKYGDTKNAR GIMLIELKKL IEANPLFRDK LIFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTPPNGP LAPTPVNLPV AAVAKPAAYT SIGAHGPFLP ATATANANAL AGWMANASAS SSVQAAVVTA SAIPVPQNPV SILKCPRTPL TTAGMADYQN
0301: ADHEQLMKRL RPAPSVEEVS CPAARPASWS LDDLPRTVAM TLHQGSSVTS MDFHPSHQTL LLVGSNNGEI TLWELGLRDR LVSKPFKIWD ISACSLPFQA
0401: AMVKDAPISV SRVTWSLDGN FVGVAFTKHL IHLYAYTGSN ELAQRIEVDA HIGGVNDLAF AHPNKQLCIV TCGDDKLIKV WDLTGRKLFN FEGHEAPVYS
0501: ICPHHKESIQ FVFSTAIDGK IKAWLYDNMG SRVDYDAPGH WCTTMLYSAD GSRLFSCGTS KDGESFLVEW NESERAIKRT YNGFRKKSAG VVQFDTTQNC
0601: FLAAGEDGQI KFWDMDNINL LTSTDAEGGL QALPHLRFNK EGNVLAVTTA DNGFKILANA NGLRSLRTVE TPGFEALRSP IESAAVKASG SSAVNVSPVN
0701: CKVERSSPVR PSPILNGVDP MGRNVEKPRT VEDGIDKAKP WQLSEIVDAV QCRLVTTPDS TDSSSKVVRL LYTNSGAGLL ALGSNGVQKL WKWARCEQNP
0801: NGKATASVVP QHWQPNSGLL MTNDVTGVNL DEAVPCIALS KNDSYVMSAC GGKISLFNMM TFKVMTTFMP PPPASTFLAF HPQDNNIIAI GMEDSTIHIY
0901: NVRVDEVKSK LKGHQKRITG LAFSTCLNIL VSSGADAQLC VWSIDTWEKR KSVPIQLPAG KAPVGDTRVQ FHLDQIRLLV AHETQLAIYD ASKMDRIRQW
1001: VPQDVLAAPI SYAAYSCNSQ LIYATFSDGN TGVFDADSLR LRCRIALSTY FSPAAALSGN QSVYPVVVAA HPLEPNQFAV GLTDGSVKVI EPSESEGKWG
1101: TSPPMDNGIL NGRAASSSTT SNHTPDLAKR
0101: LKVFSTFNEE LYKEITQLLT LSNFRENEQL SKYGDTKNAR GIMLIELKKL IEANPLFRDK LIFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTPPNGP LAPTPVNLPV AAVAKPAAYT SIGAHGPFLP ATATANANAL AGWMANASAS SSVQAAVVTA SAIPVPQNPV SILKCPRTPL TTAGMADYQN
0301: ADHEQLMKRL RPAPSVEEVS CPAARPASWS LDDLPRTVAM TLHQGSSVTS MDFHPSHQTL LLVGSNNGEI TLWELGLRDR LVSKPFKIWD ISACSLPFQA
0401: AMVKDAPISV SRVTWSLDGN FVGVAFTKHL IHLYAYTGSN ELAQRIEVDA HIGGVNDLAF AHPNKQLCIV TCGDDKLIKV WDLTGRKLFN FEGHEAPVYS
0501: ICPHHKESIQ FVFSTAIDGK IKAWLYDNMG SRVDYDAPGH WCTTMLYSAD GSRLFSCGTS KDGESFLVEW NESERAIKRT YNGFRKKSAG VVQFDTTQNC
0601: FLAAGEDGQI KFWDMDNINL LTSTDAEGGL QALPHLRFNK EGNVLAVTTA DNGFKILANA NGLRSLRTVE TPGFEALRSP IESAAVKASG SSAVNVSPVN
0701: CKVERSSPVR PSPILNGVDP MGRNVEKPRT VEDGIDKAKP WQLSEIVDAV QCRLVTTPDS TDSSSKVVRL LYTNSGAGLL ALGSNGVQKL WKWARCEQNP
0801: NGKATASVVP QHWQPNSGLL MTNDVTGVNL DEAVPCIALS KNDSYVMSAC GGKISLFNMM TFKVMTTFMP PPPASTFLAF HPQDNNIIAI GMEDSTIHIY
0901: NVRVDEVKSK LKGHQKRITG LAFSTCLNIL VSSGADAQLC VWSIDTWEKR KSVPIQLPAG KAPVGDTRVQ FHLDQIRLLV AHETQLAIYD ASKMDRIRQW
1001: VPQDVLAAPI SYAAYSCNSQ LIYATFSDGN TGVFDADSLR LRCRIALSTY FSPAAALSGN QSVYPVVVAA HPLEPNQFAV GLTDGSVKVI EPSESEGKWG
1101: TSPPMDNGIL NGRAASSSTT SNHTPDLAKR
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
Arabidopsis Description
TPR3TOPLESS-related 3 [Source:UniProtKB/TrEMBL;Acc:F4K2T3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.