Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92932 | Soybean | nucleus | 97.62 | 72.74 |
| KRG96753 | Soybean | endoplasmic reticulum | 88.0 | 65.58 |
| KRH68470 | Soybean | nucleus | 87.17 | 64.96 |
| KRH30800 | Soybean | mitochondrion | 24.11 | 62.27 |
| Solyc01g100050.2.1 | Tomato | nucleus | 82.07 | 61.04 |
| PGSC0003DMT400063603 | Potato | cytosol | 81.59 | 60.69 |
| VIT_14s0060g01680.t01 | Wine grape | cytosol | 81.35 | 60.51 |
| Bra020567.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 73.16 | 57.79 |
| Bra009930.1-P | Field mustard | cytosol | 72.68 | 56.72 |
| CDX80607 | Canola | cytosol | 74.11 | 55.86 |
| CDY25010 | Canola | cytosol | 73.16 | 55.4 |
| CDX88252 | Canola | cytosol | 72.92 | 55.37 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 73.04 | 55.36 |
| AT5G27030.2 | Thale cress | cytosol, endoplasmic reticulum | 73.63 | 54.67 |
| Os01t0254100-01 | Rice | nucleus | 72.68 | 54.21 |
| KXG32191 | Sorghum | cytosol | 71.62 | 53.6 |
| Zm00001d040279_P012 | Maize | cytosol | 71.38 | 53.42 |
| TraesCS3D01G179800.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.38 | 52.9 |
| TraesCS3B01G204200.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.26 | 52.82 |
| TraesCS3A01G173300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.26 | 52.82 |
| GSMUA_Achr11P... | Banana | cytosol | 70.07 | 51.98 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 73.52 | 51.89 |
| KRH23604 | Soybean | endoplasmic reticulum | 61.28 | 45.58 |
| KRH44501 | Soybean | cytosol | 61.28 | 45.54 |
| KRH47407 | Soybean | cytosol | 60.69 | 45.22 |
| KRH09700 | Soybean | cytosol | 60.33 | 44.96 |
| KRH20137 | Soybean | endoplasmic reticulum | 59.26 | 44.04 |
| KRH03669 | Soybean | nucleus | 59.26 | 44.0 |
| KRH61732 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 42.87 | 34.06 |
| KRH52398 | Soybean | cytosol | 42.4 | 33.87 |
| Zm00001d008338_P001 | Maize | cytosol | 54.51 | 33.0 |
| KRH05196 | Soybean | cytosol | 18.41 | 28.55 |
| KRH33863 | Soybean | cytosol | 0.24 | 0.73 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | UniProt:A0A0R0I1Q8 | EMBL:ACUP02006560 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_10G1500002 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | EnsemblPlants:KRH33861 | ProteinID:KRH33861 | ProteinID:KRH33861.1 | PFAM:PF00400 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 | InterPro:Quino_amine_DH_bsu | InterPro:Quinoprotein_ADH-like_supfam |
| SMART:SM00320 | SUPFAM:SSF50969 | SUPFAM:SSF50998 | InterPro:Topless_fam | UniParc:UPI0006ED6B4A | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:38527738..38533284
Molecular Weight (calculated)
92274.8 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.211
Length
842 amino acids
Sequence
(BLAST)
(BLAST)
001: TPPANPGMVD YQNADHDQLM KRLRPGHSVE EVSYPLARQA SWSLDDLPRT VTMTLHQGSS VTSMDFHPSH HTLLLVGSNN GEITLWELSL REKLVSKPFK
101: IWDVSACSLP FQAAAVKDAP ISVSRVTWSP DGSFVGIAFT KHLIHLYACT GSNELTQRIE VDAHVGGVND LAFAHPNKQL CIVTCGDDKL IKVWDLNGRK
201: LFSFEGHEAP VYSICPHHKE NIQFIFSTAI DGKIKAWLYD NMGSRVDYDA PGHWCTTMLY SADGTRLFSC GTSKDGESFL VEWNESEGAI KRTYNGFRKK
301: STGVVQFDTT QNRFLAAGED GQVKFWDMDN INLLISTEAD GGLQSLPRLR FNKEGNILAV TTMDNGFKIL ANASGLRSLR TIETPAFEAL RSPIESTPIK
401: VSGSSTVNVS PVNCKVERSS PVRPSPILNG VDPMGRSVEK PRTVEDVTDR AKPWQLSEIL DPVQCRSVTM PESTDSSSKV IRLLYTNSAV GILALGSNGI
501: QKLWKWARSE LNPTGKATAN VVPLHWQPNN GLLMTNDISG VNLEEAVPCI ALSKNDSYVM SACGGKVSLF NMMTFKVMTT FMPPPPASTF LAFHPQDNNI
601: IAIGMDDSTI HIYNVRVDEV KSKLKGHQKR ITGLAFSTNL NILVSSGADA HLCVWSIDTW EKRKAIPIQL PAGKSPVGDT RVQFHSDQLR LLVVHETQLA
701: IYDASKMERI RQWVPQDVLS APISYAAYSC NSQLIYATFC DANIGVFDAD SLRLRCRIAP SICLSPAALS GSQGVYPLVV AAHPLEPNQF AVGLTDGSVK
801: VIEPNESEGK WGTCPPTDNG ILNGRTGSSS TTSNHTADQA QR
101: IWDVSACSLP FQAAAVKDAP ISVSRVTWSP DGSFVGIAFT KHLIHLYACT GSNELTQRIE VDAHVGGVND LAFAHPNKQL CIVTCGDDKL IKVWDLNGRK
201: LFSFEGHEAP VYSICPHHKE NIQFIFSTAI DGKIKAWLYD NMGSRVDYDA PGHWCTTMLY SADGTRLFSC GTSKDGESFL VEWNESEGAI KRTYNGFRKK
301: STGVVQFDTT QNRFLAAGED GQVKFWDMDN INLLISTEAD GGLQSLPRLR FNKEGNILAV TTMDNGFKIL ANASGLRSLR TIETPAFEAL RSPIESTPIK
401: VSGSSTVNVS PVNCKVERSS PVRPSPILNG VDPMGRSVEK PRTVEDVTDR AKPWQLSEIL DPVQCRSVTM PESTDSSSKV IRLLYTNSAV GILALGSNGI
501: QKLWKWARSE LNPTGKATAN VVPLHWQPNN GLLMTNDISG VNLEEAVPCI ALSKNDSYVM SACGGKVSLF NMMTFKVMTT FMPPPPASTF LAFHPQDNNI
601: IAIGMDDSTI HIYNVRVDEV KSKLKGHQKR ITGLAFSTNL NILVSSGADA HLCVWSIDTW EKRKAIPIQL PAGKSPVGDT RVQFHSDQLR LLVVHETQLA
701: IYDASKMERI RQWVPQDVLS APISYAAYSC NSQLIYATFC DANIGVFDAD SLRLRCRIAP SICLSPAALS GSQGVYPLVV AAHPLEPNQF AVGLTDGSVK
801: VIEPNESEGK WGTCPPTDNG ILNGRTGSSS TTSNHTADQA QR
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
Arabidopsis Description
TPR1Topless-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.