CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23604	Soybean	endoplasmic reticulum	96.55	96.38
KRH44501	Soybean	cytosol	92.48	92.23
KRH47407	Soybean	cytosol	91.95	91.95
VIT_09s0002g08370.t01	Wine grape	cytosol	86.64	86.03
Solyc03g117360.2.1	Tomato	nucleus	84.42	84.42
Bra003569.1-P	Field mustard	cytosol	80.35	83.38
AT1G80490.2	Thale cress	cytosol	82.48	83.21
CDX81729	Canola	cytosol	82.12	83.08
CDY53312	Canola	cytosol	80.53	83.03
AT1G15750.3	Thale cress	cytosol	83.1	83.02
CDY36584	Canola	cytosol	82.12	83.01
CDX67950	Canola	cytosol	82.48	82.92
Bra026112.1-P	Field mustard	cytosol	82.04	82.77
CDY33387	Canola	cytosol	81.86	82.74
Bra026751.1-P	Field mustard	cytosol	82.65	82.65
CDX79383	Canola	cytosol	81.86	82.59
Os03t0254700-01	Rice	cytosol	80.18	79.96
GSMUA_Achr4P09920_001	Banana	cytosol	81.15	79.74
TraesCS4D01G221200.1	Wheat	cytosol	79.65	79.37
TraesCS4A01G083300.2	Wheat	cytosol	79.65	79.3
HORVU0Hr1G008690.1	Barley	cytosol, endoplasmic reticulum	79.56	79.14
TraesCS4B01G220900.3	Wheat	cytosol	79.56	79.14
EER92538	Sorghum	cytosol	78.76	79.11
GSMUA_Achr6P36440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.18	78.51
KRH03669	Soybean	nucleus	74.07	73.81
KRH20137	Soybean	endoplasmic reticulum	73.98	73.79
GSMUA_Achr6P22950_001	Banana	plasma membrane	80.18	73.18
KRH33863	Soybean	cytosol	17.61	72.36
KRG92932	Soybean	nucleus	62.48	62.48
KRG96753	Soybean	endoplasmic reticulum	61.68	61.68
KRH68470	Soybean	nucleus	61.42	61.42
KRH33861	Soybean	cytosol	44.96	60.33
KRH61732	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.03	52.26
KRH52398	Soybean	cytosol	48.58	52.09
KRH05196	Soybean	cytosol	23.81	49.54
KRH30800	Soybean	mitochondrion	13.98	48.47
Zm00001d050983_P001	Maize	cytosol	10.53	47.6
Zm00001d004623_P001	Maize	cytosol, plastid	10.53	44.07
Zm00001d027915_P001	Maize	cytosol	10.97	40.0
Zm00001d045829_P001	Maize	mitochondrion	10.53	36.5
Zm00001d052868_P001	Maize	cytosol, peroxisome, plasma membrane	7.26	34.75

Protein Annotations

EntrezGene:100798219	MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EMBL:ACUP02009107	InterPro:CTLH_C
ncoils:Coil	EnsemblPlantsGene:GLYMA_15G006100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680
InterPro:IPR006594	InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986	UniProt:K7M8S0	ProteinID:KRH09699.1
EnsemblPlants:KRH09700	ProteinID:KRH09700	ProteinID:KRH09700.1	InterPro:LisH	PFAM:PF00400	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR44083	PANTHER:PTHR44083:SF2
SMART:SM00320	SMART:SM00667	SMART:SM00668	SUPFAM:SSF50978	InterPro:Topless_fam	UniParc:UPI00023D2D03
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr15:+:529618..538294

Molecular Weight (calculated)

124821.0 Da

IEP (calculated)

6.811

GRAVY (calculated)

-0.304

Length

1130 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVERYLSGF TKVDDNRYSM KIFFEVMKQK YLEALDKHDR SKAVEILVKD
0101: LKVFATFNDE LFKEITQLLT LENFRENEQL SKYCDTKSAR AIMLVELKKL IEANPLFHDK LQFPNLKSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGQLNGA PAPSPANNLL LGSLPKAGGF PPLGAHGPFQ PSPAPVPTPL AGWMSNPTTV AHPEVSGGAI GLGVPSIPAA LKHPRTPPTY PSVDYPSGDS
0301: DHVSKRTRPM GMSDEVNLPV NVLSATFPGH GHGHGHGQAF NAPDDLPKTA MRTLNQGSSP MSMDFHPVQQ TLLLVGTNVG DIALWEVGSR ERLLMRNFKV
0401: WDLSACSMPF QAALVKDPGV SVYRVIWSPD GALFGVAYSR HIVQIYSYHS GDDVQQHLEI DAHVGGVNDL AFSHPNKQLC VITCGDDKTI KVWDAATGAK
0501: QYTFEGHEAP VYSVCPHYKE NIQFIFSTAL DGKIKAWLYD NLGSRVDYEA PGRWCTTMAY SADGTRLFSC GTSKDAESSI VEWNESEGAV KRTYQGFRKR
0601: SLGFVQFDTT KNRYLAAGDD FSIKFWDMDN IQLLTTVDAD GGLPGSPRIR FNKDGALLAV SAKENGIKIL ANADGIRLLR TLENSLYDTS RTSEVMTKPT
0701: INPISAAAAA ATSAALGERA LSVNGDARNL GDVKPRISEE SNDKSKIWKL TEINEPSQCR SLKLPENVRV NKISRLIYTN SGNAILALAS NAIHLLWKWQ
0801: RNDRNSTVKA SASVQPQLWQ PSSGILMTND ITDSNTEDAV PCFALSKNDS YVMSASGGKI SLFNMMTFKT MTTFMPPPPA ANFLAFHPQD NNIIAIGMDD
0901: SSIQIYNVRV DEVKSKLKGH TKRITGLAFS HVLNVLVSSG ADAQICVWNT DGWEKQKSRF LQLPAGRTPP AQADTRVQFH QDQIRFLVVH ETQLAIYEAT
1001: KLECLKQWFP RDSSAPISHA TFSCDSQLIY ASFLDATVCV FSVSNLRLQC RINPSAYLSA SVSSNVQPLV IAAHPQEPNQ FAVGLSDGGV HVFEPLESEG
1101: KWGVPPPIEN GSTSNMAATS VGASSDEAQR

Best Arabidopsis Sequence Match ( AT1G15750.1 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.