Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003569.1-P | Field mustard | cytosol | 96.8 | 99.91 |
| CDX79383 | Canola | cytosol | 99.29 | 99.64 |
| AT1G80490.2 | Thale cress | cytosol | 95.91 | 96.25 |
| CDY36584 | Canola | cytosol | 92.44 | 92.93 |
| CDY33387 | Canola | cytosol | 92.35 | 92.84 |
| CDX81729 | Canola | cytosol | 92.08 | 92.66 |
| CDY53312 | Canola | cytosol | 90.21 | 92.52 |
| KRH23604 | Soybean | endoplasmic reticulum | 84.88 | 84.28 |
| VIT_09s0002g08370.t01 | Wine grape | cytosol | 84.88 | 83.83 |
| KRH44501 | Soybean | cytosol | 84.25 | 83.58 |
| KRH47407 | Soybean | cytosol | 83.99 | 83.54 |
| KRH09700 | Soybean | cytosol | 82.92 | 82.48 |
| Solyc03g117360.2.1 | Tomato | nucleus | 82.03 | 81.59 |
| EER92538 | Sorghum | cytosol | 77.94 | 77.87 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 79.54 | 77.74 |
| Os03t0254700-01 | Rice | cytosol | 77.94 | 77.32 |
| HORVU0Hr1G008690.1 | Barley | cytosol, endoplasmic reticulum | 77.94 | 77.11 |
| TraesCS4D01G221200.1 | Wheat | cytosol | 77.76 | 77.07 |
| TraesCS4A01G083300.2 | Wheat | cytosol | 77.67 | 76.92 |
| TraesCS4B01G220900.3 | Wheat | cytosol | 77.4 | 76.58 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.47 | 76.43 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 78.38 | 71.16 |
| CDX82426 | Canola | cytosol | 69.93 | 69.37 |
| CDX75851 | Canola | cytosol | 69.75 | 69.2 |
| CDY20161 | Canola | cytosol | 69.48 | 68.93 |
| CDY21881 | Canola | cytosol | 69.31 | 68.76 |
| CDY67912 | Canola | cytosol | 35.59 | 67.34 |
| CDY25010 | Canola | cytosol | 61.74 | 62.41 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.57 | 62.29 |
| CDX80607 | Canola | cytosol | 61.65 | 62.04 |
| CDX92100 | Canola | cytosol | 62.37 | 61.93 |
| CDX95900 | Canola | cytosol | 62.28 | 61.62 |
| CDX88252 | Canola | cytosol | 60.59 | 61.41 |
| CDY50502 | Canola | cytosol, plastid | 62.01 | 54.8 |
| CDY50500 | Canola | cytosol | 23.84 | 53.07 |
| Zm00001d050983_P001 | Maize | cytosol | 11.3 | 50.8 |
| CDY04683 | Canola | mitochondrion | 5.52 | 50.0 |
| Zm00001d004623_P001 | Maize | cytosol, plastid | 11.21 | 46.67 |
| Zm00001d027915_P001 | Maize | cytosol | 11.48 | 41.61 |
| Zm00001d045829_P001 | Maize | mitochondrion | 11.03 | 38.04 |
| Zm00001d052868_P001 | Maize | cytosol, peroxisome, plasma membrane | 7.56 | 36.02 |
| CDX83225 | Canola | cytosol | 21.62 | 32.49 |
| CDY38509 | Canola | cytosol | 21.62 | 31.72 |
| CDX79301 | Canola | cytosol | 5.87 | 30.41 |
| CDY12727 | Canola | golgi | 8.19 | 26.51 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078BTI3 | EnsemblPlants:CDX67950 | ProteinID:CDX67950 |
| ProteinID:CDX67950.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00099161001 |
| InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 |
| PANTHER:PTHR44083 | PANTHER:PTHR44083:SF2 | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50978 |
| InterPro:Topless_fam | UniParc:UPI0004EF0654 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
BnaA07g19900D
Coordinates
chrLK031787:-:3056093..3062077
Molecular Weight (calculated)
124428.0 Da
IEP (calculated)
7.238
GRAVY (calculated)
-0.330
Length
1124 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHSGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVEILVKD
0101: LRVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAGGF PPLGAHGPFQ PTPSQVPTPL AGWMSSSSSV PHPAVSGGAI ALGSPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: EHVSKRTRPM GISDEVNLGV NMLPMTFPGQ AHGHTQAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCFT TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGDSYIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDNVQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN TDGLRLLHTV DNLSSESSKP AINNIAVAER
0701: AAERPASVVS IPGMNGDSRN MVDVKPVITE ESNDKSKIWK LTEVGEPSQC RSLRLPENMR VTKISRLIFT NSGNAILALA SNAIHLLWKW QRNDRNATGK
0801: ATASLPPQQW QPASGILMTN DVTEANSEEA VPCFALSKND SYVMSASGGK ISLFNMMTFK TMATFMPPPP AATFLAFHPQ DNNIIAIGMD DSTIQIYNVR
0901: VDEVKSKLKG HSKRITGLAF SNVLNVLVSS GADAQLCVWN TDGWEKQRSK VLQVPQGRST GALSDTRVQF HQDQVHFLVV HETQLAIYET TKLECMKQWP
1001: VRESSAPITH ATFSCDSQLI YASFMDATIC VFTSANLRLR CRVNPSAYLP ASLSNSNVHP LVIAAHPQES NMFAVGLSDG GVHIFEPLES EGKWGVAPPP
1101: ENGSSSALAS TPSVGASASD QPQR
0101: LRVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAGGF PPLGAHGPFQ PTPSQVPTPL AGWMSSSSSV PHPAVSGGAI ALGSPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: EHVSKRTRPM GISDEVNLGV NMLPMTFPGQ AHGHTQAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCFT TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGDSYIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDNVQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN TDGLRLLHTV DNLSSESSKP AINNIAVAER
0701: AAERPASVVS IPGMNGDSRN MVDVKPVITE ESNDKSKIWK LTEVGEPSQC RSLRLPENMR VTKISRLIFT NSGNAILALA SNAIHLLWKW QRNDRNATGK
0801: ATASLPPQQW QPASGILMTN DVTEANSEEA VPCFALSKND SYVMSASGGK ISLFNMMTFK TMATFMPPPP AATFLAFHPQ DNNIIAIGMD DSTIQIYNVR
0901: VDEVKSKLKG HSKRITGLAF SNVLNVLVSS GADAQLCVWN TDGWEKQRSK VLQVPQGRST GALSDTRVQF HQDQVHFLVV HETQLAIYET TKLECMKQWP
1001: VRESSAPITH ATFSCDSQLI YASFMDATIC VFTSANLRLR CRVNPSAYLP ASLSNSNVHP LVIAAHPQES NMFAVGLSDG GVHIFEPLES EGKWGVAPPP
1101: ENGSSSALAS TPSVGASASD QPQR
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
Arabidopsis Description
TPR1Topless-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.