Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001613.1-P | Field mustard | cytosol | 98.85 | 99.73 |
| CDX75851 | Canola | cytosol | 99.03 | 99.03 |
| AT3G15880.2 | Thale cress | cytosol | 94.79 | 94.46 |
| CDY20161 | Canola | cytosol | 94.0 | 94.0 |
| CDY21881 | Canola | cytosol | 93.47 | 93.47 |
| Solyc03g116750.2.1 | Tomato | nucleus | 76.26 | 76.33 |
| VIT_09s0002g07020.t01 | Wine grape | cytosol | 76.35 | 76.01 |
| CDY36584 | Canola | cytosol | 69.46 | 70.39 |
| CDX81729 | Canola | cytosol | 69.37 | 70.37 |
| CDY53312 | Canola | cytosol | 67.96 | 70.26 |
| CDY33387 | Canola | cytosol | 69.11 | 70.04 |
| CDX67950 | Canola | cytosol | 69.37 | 69.93 |
| CDX79383 | Canola | cytosol | 69.11 | 69.91 |
| CDY67912 | Canola | cytosol | 34.69 | 66.16 |
| CDY25010 | Canola | cytosol | 59.49 | 60.61 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 59.4 | 60.58 |
| CDX80607 | Canola | cytosol | 59.66 | 60.52 |
| CDX88252 | Canola | cytosol | 58.78 | 60.05 |
| CDX92100 | Canola | cytosol | 59.22 | 59.28 |
| CDX95900 | Canola | cytosol | 59.13 | 58.98 |
| CDY50502 | Canola | cytosol, plastid | 59.13 | 52.67 |
| CDY50500 | Canola | cytosol | 22.33 | 50.1 |
| CDY04683 | Canola | mitochondrion | 5.12 | 46.77 |
| CDX83225 | Canola | cytosol | 21.62 | 32.75 |
| CDY38509 | Canola | cytosol | 21.8 | 32.25 |
| CDX79301 | Canola | cytosol | 5.83 | 30.41 |
| CDY12727 | Canola | golgi | 7.86 | 25.65 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078CZ15 | EnsemblPlants:CDX82426 | ProteinID:CDX82426 |
| ProteinID:CDX82426.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00137556001 |
| InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH |
| PFAM:PF00400 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 |
| PANTHER:PTHR44083:SF1 | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF101908 | SUPFAM:SSF50978 |
| SUPFAM:SSF75011 | InterPro:Topless_fam | UniParc:UPI0004EE26B9 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
BnaA03g33950D
Coordinates
chrLK031828:+:1173801..1180615
Molecular Weight (calculated)
123727.0 Da
IEP (calculated)
7.457
GRAVY (calculated)
-0.327
Length
1133 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFYFNMRY FEDSVTAGEW DDVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKKDN AKAVDILVKE
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPTLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFI
0201: DHSCGHPNGS HVASPATNHL MGSAPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVS HPTVSAGPIG LGAPNSAVSM LKHPRTPPTN SLAMDYQTAD
0301: SESVLKRPRP FGISDGVNNL PVNVLPVTYP GQSHSHAAYS TDDLPKNVSR VLSQGSAIKS MDFHPVQQTM LLVGTNVGDI AIWEVGSRDK LVSRSFKVWD
0401: LAACTANLQA SLASEYTAAV NRVVWSPDGG LLGVAYSKHI VHIYSYHGGN DLRNHLEVDA HAGNVNDLAF SLPNQQLCFV TCGEDKTIKV WDAVTGNKLH
0501: TFEGHDAPVY SVCPHQKENI QFIFSTAVDG KIKAWLYDNM GSRVDYDAPG RSCTAMAYCA DGTRLFSCGT SKEGESFIVE WNESEGAVKR TYHGLGKRSV
0601: GVVQFDTMKN KFLVAGDEFQ VKFWDMDSVD LLTTTHADGG LPSSPCLRIN KEGTLLAVST TENGIKILAN AEGSRILHSM ANRGLESSRG PPGSVAKGPI
0701: VGAFGTPSSS TGMSLSMADR SGPGASVTGM NGDNRNLPDV KPRIPDEAEK SKIWKLTEIS ERSQLRTLRL PDSLIQARVV KLIYTNSGSA ILALAENALH
0801: KLWKWQKSER NLLGKANSNV PPQLWQPSSG VVMTNDTREG SKEDVVPCFA LSKNDSYVMS ASGGKISLFN MMTFKTMTTF MAPPPAATSL AFHPQDNNII
0901: AIGMDDSSIQ IYNVRVDEVK SKLKGHQKRV TGLAFSNVLN VLVSSGADSQ LCVWSMDGWE KQASKQIQIP SGHSPNPLAH TRVQFHQDQT HVLVVHASQL
1001: AIYEAPKLES MKQWIPKESS GSVTDAVYSC DSQSIYAAFD DGSVSILTAT TLQLKCRIGP NSYLPSNPSS RVYPATIAAH PSEPNQFAVG LTDGGVHVIE
1101: PPGPEGKWGM SPPPENGAGP SVSAAPGSDQ QPR
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPTLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFI
0201: DHSCGHPNGS HVASPATNHL MGSAPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVS HPTVSAGPIG LGAPNSAVSM LKHPRTPPTN SLAMDYQTAD
0301: SESVLKRPRP FGISDGVNNL PVNVLPVTYP GQSHSHAAYS TDDLPKNVSR VLSQGSAIKS MDFHPVQQTM LLVGTNVGDI AIWEVGSRDK LVSRSFKVWD
0401: LAACTANLQA SLASEYTAAV NRVVWSPDGG LLGVAYSKHI VHIYSYHGGN DLRNHLEVDA HAGNVNDLAF SLPNQQLCFV TCGEDKTIKV WDAVTGNKLH
0501: TFEGHDAPVY SVCPHQKENI QFIFSTAVDG KIKAWLYDNM GSRVDYDAPG RSCTAMAYCA DGTRLFSCGT SKEGESFIVE WNESEGAVKR TYHGLGKRSV
0601: GVVQFDTMKN KFLVAGDEFQ VKFWDMDSVD LLTTTHADGG LPSSPCLRIN KEGTLLAVST TENGIKILAN AEGSRILHSM ANRGLESSRG PPGSVAKGPI
0701: VGAFGTPSSS TGMSLSMADR SGPGASVTGM NGDNRNLPDV KPRIPDEAEK SKIWKLTEIS ERSQLRTLRL PDSLIQARVV KLIYTNSGSA ILALAENALH
0801: KLWKWQKSER NLLGKANSNV PPQLWQPSSG VVMTNDTREG SKEDVVPCFA LSKNDSYVMS ASGGKISLFN MMTFKTMTTF MAPPPAATSL AFHPQDNNII
0901: AIGMDDSSIQ IYNVRVDEVK SKLKGHQKRV TGLAFSNVLN VLVSSGADSQ LCVWSMDGWE KQASKQIQIP SGHSPNPLAH TRVQFHQDQT HVLVVHASQL
1001: AIYEAPKLES MKQWIPKESS GSVTDAVYSC DSQSIYAAFD DGSVSILTAT TLQLKCRIGP NSYLPSNPSS RVYPATIAAH PSEPNQFAVG LTDGGVHVIE
1101: PPGPEGKWGM SPPPENGAGP SVSAAPGSDQ QPR
0001: MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFFFNMRY FEDSVTAGEW DDVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKKDH AKAVDILVKE
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHTCGHPNGA HTPSPTTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVQ HPTVSAGPIG LGAPNSAVSM LKRERPRSPP TNSLSMDYQT
0301: ADSESVLKRP RPFGISDGVN NLPVNVLPVT YPGQSHAHAT YSTDDLPKNV SRILSQGSAI KSMDFHPVQQ TMLLVGTNLG DIAIWEVGSR EKLVSRSFKV
0401: WDLATCTVNL QASLASEYTA AVNRVVWSPD GGLLGVAYSK HIVHIYSYHG GEDLRNHLEI DAHAGNVNDL AFSQPNQQLC VVTCGEDKTI KVWDAVTGNK
0501: LHTFEGHEAP VYSVCPHQKE NIQFIFSTAV DGKIKAWLYD NMGSRVDYDA PGRSCTSMAY CADGTRLFSC GTSKEGESFI VEWNESEGAV KRTYLGLGKR
0601: SVGVVQFDTM KNKFLVAGDE FQVKFWDMDS VDLLSSTAAE GGLPSSPCLR INKEGTLLAV STTDNGIKIL ANAEGSRILH SMANRGLDSS RAPPGSVAKG
0701: PIVGTFGTPN SSTGMSLSMG ERSGPVASVT GLNGDNRSLP DVKPRIADDA EKSKTWKLTE ISERSQLRTL RLPDTLLPAR VVKLIYTNSG GAILALAENA
0801: AHKLWKWQKS ERNLLGKANS NVPPQLWQPS SGVLMTNDTR EGNKEDVVPC FALSKNDSYV MSASGGKISL FNMMTFKTMT TFMAPPPAAT SLAFHPQDNN
0901: IIAIGMDDSS IQIYNVRVDE VKSKLKGHQK RVTGLAFSNV LNVLVSSGAD SQLCVWSMDG WEKQASKQIQ IPSGHSPNPL AHTRVQFHQD QIHVLVVHAS
1001: QLAIYEAPKL ENMKQWIPKE SSGSVTDAVY SCDSQSIYAA FDDGSVSILT ATTLQLKCRI GPNSYLPSNP SSRVYPATVA AHPSEPNQFA VGLTDGGVHV
1101: IEPPGPEGKW GISAPPENGA GPSVSSAPGS DQQPR
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHTCGHPNGA HTPSPTTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVQ HPTVSAGPIG LGAPNSAVSM LKRERPRSPP TNSLSMDYQT
0301: ADSESVLKRP RPFGISDGVN NLPVNVLPVT YPGQSHAHAT YSTDDLPKNV SRILSQGSAI KSMDFHPVQQ TMLLVGTNLG DIAIWEVGSR EKLVSRSFKV
0401: WDLATCTVNL QASLASEYTA AVNRVVWSPD GGLLGVAYSK HIVHIYSYHG GEDLRNHLEI DAHAGNVNDL AFSQPNQQLC VVTCGEDKTI KVWDAVTGNK
0501: LHTFEGHEAP VYSVCPHQKE NIQFIFSTAV DGKIKAWLYD NMGSRVDYDA PGRSCTSMAY CADGTRLFSC GTSKEGESFI VEWNESEGAV KRTYLGLGKR
0601: SVGVVQFDTM KNKFLVAGDE FQVKFWDMDS VDLLSSTAAE GGLPSSPCLR INKEGTLLAV STTDNGIKIL ANAEGSRILH SMANRGLDSS RAPPGSVAKG
0701: PIVGTFGTPN SSTGMSLSMG ERSGPVASVT GLNGDNRSLP DVKPRIADDA EKSKTWKLTE ISERSQLRTL RLPDTLLPAR VVKLIYTNSG GAILALAENA
0801: AHKLWKWQKS ERNLLGKANS NVPPQLWQPS SGVLMTNDTR EGNKEDVVPC FALSKNDSYV MSASGGKISL FNMMTFKTMT TFMAPPPAAT SLAFHPQDNN
0901: IIAIGMDDSS IQIYNVRVDE VKSKLKGHQK RVTGLAFSNV LNVLVSSGAD SQLCVWSMDG WEKQASKQIQ IPSGHSPNPL AHTRVQFHQD QIHVLVVHAS
1001: QLAIYEAPKL ENMKQWIPKE SSGSVTDAVY SCDSQSIYAA FDDGSVSILT ATTLQLKCRI GPNSYLPSNP SSRVYPATVA AHPSEPNQFA VGLTDGGVHV
1101: IEPPGPEGKW GISAPPENGA GPSVSSAPGS DQQPR
Arabidopsis Description
WSIP2WUS-interacting protein 2 [Source:TAIR;Acc:AT3G15880]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.