Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026112.1-P | Field mustard | cytosol | 99.91 | 99.73 |
| CDY33387 | Canola | cytosol | 99.46 | 99.46 |
| CDY53312 | Canola | cytosol | 96.06 | 97.99 |
| CDX81729 | Canola | cytosol | 97.85 | 97.94 |
| AT1G15750.3 | Thale cress | cytosol | 97.5 | 96.37 |
| CDX67950 | Canola | cytosol | 92.93 | 92.44 |
| CDX79383 | Canola | cytosol | 92.22 | 92.05 |
| VIT_09s0002g08370.t01 | Wine grape | cytosol | 85.78 | 84.27 |
| KRH23604 | Soybean | endoplasmic reticulum | 85.06 | 84.01 |
| KRH44501 | Soybean | cytosol | 84.88 | 83.76 |
| KRH47407 | Soybean | cytosol | 84.62 | 83.72 |
| KRH09700 | Soybean | cytosol | 83.01 | 82.12 |
| Solyc03g117360.2.1 | Tomato | nucleus | 82.11 | 81.24 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 80.23 | 78.0 |
| EER92538 | Sorghum | cytosol | 78.0 | 77.51 |
| Os03t0254700-01 | Rice | cytosol | 78.44 | 77.41 |
| TraesCS4D01G221200.1 | Wheat | cytosol | 78.26 | 77.16 |
| TraesCS4A01G083300.2 | Wheat | cytosol | 78.18 | 77.0 |
| HORVU0Hr1G008690.1 | Barley | cytosol, endoplasmic reticulum | 78.0 | 76.76 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 79.16 | 76.69 |
| TraesCS4B01G220900.3 | Wheat | cytosol | 77.91 | 76.67 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 79.25 | 71.57 |
| CDX82426 | Canola | cytosol | 70.39 | 69.46 |
| CDX75851 | Canola | cytosol | 70.21 | 69.29 |
| CDY20161 | Canola | cytosol | 69.59 | 68.67 |
| CDY21881 | Canola | cytosol | 69.41 | 68.49 |
| CDY67912 | Canola | cytosol | 36.14 | 68.01 |
| CDX92100 | Canola | cytosol | 63.24 | 62.46 |
| CDX95900 | Canola | cytosol | 63.33 | 62.32 |
| CDY25010 | Canola | cytosol | 61.54 | 61.87 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.36 | 61.75 |
| CDX80607 | Canola | cytosol | 61.45 | 61.5 |
| CDX88252 | Canola | cytosol | 60.64 | 61.14 |
| CDY50502 | Canola | cytosol, plastid | 63.24 | 55.58 |
| CDY50500 | Canola | cytosol | 24.42 | 54.06 |
| CDY04683 | Canola | mitochondrion | 5.55 | 50.0 |
| Zm00001d050983_P001 | Maize | cytosol | 10.73 | 48.0 |
| Zm00001d004623_P001 | Maize | cytosol, plastid | 10.82 | 44.81 |
| Zm00001d027915_P001 | Maize | cytosol | 11.18 | 40.32 |
| Zm00001d045829_P001 | Maize | mitochondrion | 11.0 | 37.73 |
| Zm00001d052868_P001 | Maize | cytosol, peroxisome, plasma membrane | 7.51 | 35.59 |
| CDX83225 | Canola | cytosol | 21.56 | 32.22 |
| CDY38509 | Canola | cytosol | 21.56 | 31.46 |
| CDX79301 | Canola | cytosol | 5.99 | 30.88 |
| CDY12727 | Canola | golgi | 8.23 | 26.51 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078HGR5 | UniProt:A0A078HGR5 | EnsemblPlants:CDY36584 |
| ProteinID:CDY36584 | ProteinID:CDY36584.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00062275001 | InterPro:Haem_d1_sf | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 |
| InterPro:IPR017986 | InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF2 | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 |
| SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50978 | SUPFAM:SSF50998 | SUPFAM:SSF51004 | InterPro:Topless_fam |
| UniParc:UPI0004EE12C7 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g10370DBnaA06g10370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGR5]
Coordinates
chrLK032378:-:287212..293145
Molecular Weight (calculated)
122931.0 Da
IEP (calculated)
7.237
GRAVY (calculated)
-0.310
Length
1118 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVEILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGPI ALGGPSISAA LKHPRTPPTA LDYPSADSEH
0301: VSKRTRPMGI SDEVSLGAHG HSPAFKAPDD LPKTVARTLT QGSSPMSMDF HPIKQTLLLV GTNVGDIGLW EVGSRERLVQ KTFKVWDISK CSMPLQAALV
0401: KEPVVSVNRV IWSPDGSLFG VAYSRHIVQL YSYHGGEDMR QHLEIDAHVG GVNDISFSTP NKQLCVITCG DDKTIKVWDA ATGVKRHTFE GHEAPVYSIC
0501: PHYKENIQFI FSTALDGKIK AWLYDNMGSR VDYDAPGRWC TTMAYSADGT RLFSCGTSKD GESYIVEWNE SEGAVKRTYQ GFHKRSLGVV QFDTTKNRYL
0601: AAGDDFSIKF WDMDNVQLLT AIDGDGGLQA SPRIRFNKEG SLLAVSGNEN VIKIMANSDG LRLLHTFENV SSESSKPAIS SLAAAAAAAA TSAGLTDRPA
0701: NVVSIQGMNG DSRNMVDVKP VITEEPNDKS KIWKLTEVSE PSQCRSLRLP ENLRVAKISR LIFTNSGNAI LALASNAIHL LWKWQRNDRN ATGKATASLP
0801: PQQWQPASGI LMTNDAAENN PEEAVPCFAL SKNDSYVMSA SGGKISLFNM MTFKTMATFM PPPPAATFLA FHPQDNNIIA IGMDDSTIQI YNVRVDEVKS
0901: KLKGHSKRIT GLAFSNVLNV LVSSGADAQL CVWNTDGWEK QRSKVLPLPQ GRPNTAPSDT RVQFHQDQAH FLVVHETQLA IYETTKLECM KQWPVRESSA
1001: PITHATFSCD SQLVYASFMD ATICVFSSAN LRLRCRVNPS AYLPASLSNS NVHPLVIAAH PQEPNMFAVG LSDGGVHIFE PVESEGKWGV APPAENGSAS
1101: GAAAAPSVGA SASDQPQR
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGPI ALGGPSISAA LKHPRTPPTA LDYPSADSEH
0301: VSKRTRPMGI SDEVSLGAHG HSPAFKAPDD LPKTVARTLT QGSSPMSMDF HPIKQTLLLV GTNVGDIGLW EVGSRERLVQ KTFKVWDISK CSMPLQAALV
0401: KEPVVSVNRV IWSPDGSLFG VAYSRHIVQL YSYHGGEDMR QHLEIDAHVG GVNDISFSTP NKQLCVITCG DDKTIKVWDA ATGVKRHTFE GHEAPVYSIC
0501: PHYKENIQFI FSTALDGKIK AWLYDNMGSR VDYDAPGRWC TTMAYSADGT RLFSCGTSKD GESYIVEWNE SEGAVKRTYQ GFHKRSLGVV QFDTTKNRYL
0601: AAGDDFSIKF WDMDNVQLLT AIDGDGGLQA SPRIRFNKEG SLLAVSGNEN VIKIMANSDG LRLLHTFENV SSESSKPAIS SLAAAAAAAA TSAGLTDRPA
0701: NVVSIQGMNG DSRNMVDVKP VITEEPNDKS KIWKLTEVSE PSQCRSLRLP ENLRVAKISR LIFTNSGNAI LALASNAIHL LWKWQRNDRN ATGKATASLP
0801: PQQWQPASGI LMTNDAAENN PEEAVPCFAL SKNDSYVMSA SGGKISLFNM MTFKTMATFM PPPPAATFLA FHPQDNNIIA IGMDDSTIQI YNVRVDEVKS
0901: KLKGHSKRIT GLAFSNVLNV LVSSGADAQL CVWNTDGWEK QRSKVLPLPQ GRPNTAPSDT RVQFHQDQAH FLVVHETQLA IYETTKLECM KQWPVRESSA
1001: PITHATFSCD SQLVYASFMD ATICVFSSAN LRLRCRVNPS AYLPASLSNS NVHPLVIAAH PQEPNMFAVG LSDGGVHIFE PVESEGKWGV APPAENGSAS
1101: GAAAAPSVGA SASDQPQR
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.