Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36584 | Canola | cytosol | 99.73 | 99.91 |
| CDY33387 | Canola | cytosol | 99.38 | 99.55 |
| Bra026751.1-P | Field mustard | cytosol | 98.21 | 97.35 |
| AT1G15750.3 | Thale cress | cytosol | 97.32 | 96.37 |
| Bra003569.1-P | Field mustard | cytosol | 90.36 | 92.93 |
| VIT_09s0002g08370.t01 | Wine grape | cytosol | 85.54 | 84.18 |
| KRH23604 | Soybean | endoplasmic reticulum | 84.82 | 83.92 |
| KRH44501 | Soybean | cytosol | 84.64 | 83.67 |
| KRH47407 | Soybean | cytosol | 84.38 | 83.63 |
| KRH09700 | Soybean | cytosol | 82.77 | 82.04 |
| Solyc03g117360.2.1 | Tomato | nucleus | 81.88 | 81.15 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 80.0 | 77.91 |
| EER92538 | Sorghum | cytosol | 77.77 | 77.42 |
| Os03t0254700-01 | Rice | cytosol | 78.21 | 77.32 |
| TraesCS4D01G221200.1 | Wheat | cytosol | 78.21 | 77.25 |
| TraesCS4A01G083300.2 | Wheat | cytosol | 78.12 | 77.09 |
| HORVU0Hr1G008690.1 | Barley | cytosol, endoplasmic reticulum | 77.95 | 76.85 |
| TraesCS4B01G220900.3 | Wheat | cytosol | 77.86 | 76.76 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.93 | 76.6 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 79.02 | 71.49 |
| Bra001613.1-P | Field mustard | cytosol | 69.38 | 69.19 |
| Bra021142.1-P | Field mustard | cytosol | 69.38 | 68.58 |
| Bra020567.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 59.82 | 62.85 |
| Bra022181.1-P | Field mustard | cytosol | 63.12 | 62.46 |
| Bra009930.1-P | Field mustard | cytosol | 59.2 | 61.45 |
| Bra028653.1-P | Field mustard | mitochondrion | 64.02 | 58.63 |
| Bra021203.1-P | Field mustard | cytosol | 63.04 | 56.26 |
| Bra006005.1-P | Field mustard | cytosol | 53.75 | 56.05 |
| Bra006006.1-P | Field mustard | cytosol | 43.93 | 50.26 |
| Zm00001d050983_P001 | Maize | cytosol | 10.71 | 48.0 |
| Zm00001d004623_P001 | Maize | cytosol, plastid | 10.8 | 44.81 |
| Zm00001d027915_P001 | Maize | cytosol | 11.07 | 40.0 |
| Zm00001d045829_P001 | Maize | mitochondrion | 10.98 | 37.73 |
| Zm00001d052868_P001 | Maize | cytosol, peroxisome, plasma membrane | 7.5 | 35.59 |
| Bra000550.1-P | Field mustard | cytosol | 17.23 | 31.38 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | EnsemblPlantsGene:Bra026112 | EnsemblPlants:Bra026112.1 | EnsemblPlants:Bra026112.1-P |
| InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH | UniProt:M4EBF3 | PFAM:PF00400 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 | PANTHER:PTHR44083 |
| PANTHER:PTHR44083:SF2 | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50998 |
| SUPFAM:SSF69322 | InterPro:Topless_fam | UniParc:UPI000253F0B6 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | SEG:seg | : | : | : | : |
Description
AT1G15750 (E=0.0) WSIP1, TPL | TPL (TOPLESS); protein binding / protein homodimerization/ transcription repressor
Coordinates
chrA06:-:6040529..6045735
Molecular Weight (calculated)
123116.0 Da
IEP (calculated)
7.237
GRAVY (calculated)
-0.311
Length
1120 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVEILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGPI ALGGPSISAA LKHPRTPPTA LDYPSADSEH
0301: VSKRTRPMGI SDEVSLGQAH GHSPAFKAPD DLPKTVARTL TQGSSPMSMD FHPIKQTLLL VGTNVGDIGL WEVGSRERLV QKTFKVWDIS KCSMPLQAAL
0401: VKEPVVSVNR VIWSPDGSLF GVAYSRHIVQ LYSYHGGEDM RQHLEIDAHV GGVNDISFST PNKQLCVITC GDDKTIKVWD AATGVKRHTF EGHEAPVYSI
0501: CPHYKENIQF IFSTALDGKI KAWLYDNMGS RVDYDAPGRW CTTMAYSADG TRLFSCGTSK DGESYIVEWN ESEGAVKRTY QGFHKRSLGV VQFDTTKNRY
0601: LAAGDDFSIK FWDMDNVQLL TAIDGDGGLQ ASPRIRFNKE GSLLAVSGNE NVIKVMANSD GLRLLHTFEN VSSESSKPAI SSLAAAAAAA AATSAGLTDR
0701: PANVVSIQGM NGDSRNMVDV KPVITEEPND KSKIWKLTEV SEPSQCRSLR LPENLRVAKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDAAE NNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQRSKVLPL PQGRPNTAPS DTRVQFHQDQ AHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: SAPITHATFS CDSQLVYASF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQEPNMFA VGLSDGGVHI FEPVESEGKW GVAPPAENGS
1101: ASGAAAAPSV GASASDQPQR
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR SIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGPI ALGGPSISAA LKHPRTPPTA LDYPSADSEH
0301: VSKRTRPMGI SDEVSLGQAH GHSPAFKAPD DLPKTVARTL TQGSSPMSMD FHPIKQTLLL VGTNVGDIGL WEVGSRERLV QKTFKVWDIS KCSMPLQAAL
0401: VKEPVVSVNR VIWSPDGSLF GVAYSRHIVQ LYSYHGGEDM RQHLEIDAHV GGVNDISFST PNKQLCVITC GDDKTIKVWD AATGVKRHTF EGHEAPVYSI
0501: CPHYKENIQF IFSTALDGKI KAWLYDNMGS RVDYDAPGRW CTTMAYSADG TRLFSCGTSK DGESYIVEWN ESEGAVKRTY QGFHKRSLGV VQFDTTKNRY
0601: LAAGDDFSIK FWDMDNVQLL TAIDGDGGLQ ASPRIRFNKE GSLLAVSGNE NVIKVMANSD GLRLLHTFEN VSSESSKPAI SSLAAAAAAA AATSAGLTDR
0701: PANVVSIQGM NGDSRNMVDV KPVITEEPND KSKIWKLTEV SEPSQCRSLR LPENLRVAKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDAAE NNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQRSKVLPL PQGRPNTAPS DTRVQFHQDQ AHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: SAPITHATFS CDSQLVYASF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQEPNMFA VGLSDGGVHI FEPVESEGKW GVAPPAENGS
1101: ASGAAAAPSV GASASDQPQR
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.