Factsheet for Bra021142.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20161	Canola	cytosol	99.82	99.82
Bra001613.1-P	Field mustard	cytosol	92.85	93.68
AT3G15880.2	Thale cress	cytosol	93.82	93.49
Solyc03g116750.2.1	Tomato	nucleus	75.82	75.88
VIT_09s0002g07020.t01	Wine grape	cytosol	75.99	75.66
Bra003569.1-P	Field mustard	cytosol	67.17	69.88
Bra026112.1-P	Field mustard	cytosol	68.58	69.38
Bra026751.1-P	Field mustard	cytosol	69.02	69.2
Bra020567.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.08	61.73
Bra009930.1-P	Field mustard	cytosol	57.81	60.7
Bra028653.1-P	Field mustard	mitochondrion	64.96	60.18
Bra022181.1-P	Field mustard	cytosol	58.69	58.75
Bra006005.1-P	Field mustard	cytosol	53.57	56.52
Bra021203.1-P	Field mustard	cytosol	58.52	52.83
Bra006006.1-P	Field mustard	cytosol	44.66	51.69
Bra000550.1-P	Field mustard	cytosol	17.3	31.87

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EnsemblPlantsGene:Bra021142	EnsemblPlants:Bra021142.1	EnsemblPlants:Bra021142.1-P
InterPro:CTLH_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680	InterPro:IPR006594
InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH	UniProt:M4DX96	PFAM:PF00400
PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR44083	PANTHER:PTHR44083:SF1
InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SMART:SM00667	SMART:SM00668	SUPFAM:SSF50998	SUPFAM:SSF82171
InterPro:Topless_fam	UniParc:UPI0002543D9D	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	SEG:seg

Description

AT3G15880 (E=0.0) WSIP2, TPR4 | protein binding

Coordinates

chrA01:+:23757812..23763617

Molecular Weight (calculated)

123799.0 Da

IEP (calculated)

7.359

GRAVY (calculated)

-0.330

Length

1133 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFFFNMRY FEDCISAGEW DDVEKYLSGF TKADDNRYSM KIFFEIRKQK YLEALDKKDH AKAVEILAKE
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPTLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGHPNGS HVPSPVTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSIS HPTVSAGPIG LGAPNSSVSM LKRPRTPPTN SLSMDYQTAD
0301: SESVLKRPRP FGISDGVNNH PVNVLPVTYP GQNHAHAAYS TDDLPKTVSR VLSQGSAIKS MDFHPVQQTM LLVGTNLGDI AIWEVGSRDK LASRSFKVWD
0401: LATCTGNLQA SLASEYTAAV NRVIWSPDGG LLGVAYSKHI VHIYSYHGGD DLRNHLEIDA HAGNVNDLAF SQPNQELCVV TCGEDKTIKV WSAVTGNKLH
0501: TFEGHEAPVY SVCPHQKENI QFIFSTAVDG RIKAWLYDNM GSRVDYDAPG RSCTAMAYSA DGTRLFSCGT SKEGESFIVE WNESEGAVKR TYLGLGKRSV
0601: GVVQFDTLKN KFLVAGDEFH VKFWDMDSVE LLTTTTADGG LPSSPCLRIN KEGTLLAVST TENGIKILAN AEGSRILHSM ANRGVESSRA PPGSVSKGPI
0701: VGTFGTPSSS TGMSLSMAER SGPGAAVTAM NGDTRSLSDV KPRIPDEAER SKVWKLAEIS ERSQLRTLRL PDTLLPGRIV KLIYTNSGGA ILALAENALH
0801: KLWKWQKSER NLSGKANSNV PPQLWQPPNG VLMTNDTREG NKEDVVPCFA LSKNDSYVMS ASGGKISLFN MMTFKTMTTF MAPPPAATSL AFHPQDNNII
0901: AIGMDDSSIQ IYNVRVDEVK SKLKGHQKRV TGLAFSNVLN VLVSSGADSQ LCVWSMDGWE KQASKQIQIP SGHSPNPLAH TRVQFHQDQT HVLVVHASQL
1001: AIYEAPKLEN VKQWIPTESS GSVTDAVYSC DSQSIYAAFD DGSVSILTAT TLQLKCRIGP SSYLPSNPSL RLYPATIAAH PSEPNQFAVG LTDGGVHVIE
1101: PPGPEGKWGM SPPPENGAGP SVSSAPGSDQ QPR

Best Arabidopsis Sequence Match ( AT3G15880.4 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFFFNMRY FEDSVTAGEW DDVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKKDH AKAVDILVKE
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHTCGHPNGA HTPSPTTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVQ HPTVSAGPIG LGAPNSAVSM LKRERPRSPP TNSLSMDYQT
0301: ADSESVLKRP RPFGISDGVN NLPVNVLPVT YPGQSHAHAT YSTDDLPKNV SRILSQGSAI KSMDFHPVQQ TMLLVGTNLG DIAIWEVGSR EKLVSRSFKV
0401: WDLATCTVNL QASLASEYTA AVNRVVWSPD GGLLGVAYSK HIVHIYSYHG GEDLRNHLEI DAHAGNVNDL AFSQPNQQLC VVTCGEDKTI KVWDAVTGNK
0501: LHTFEGHEAP VYSVCPHQKE NIQFIFSTAV DGKIKAWLYD NMGSRVDYDA PGRSCTSMAY CADGTRLFSC GTSKEGESFI VEWNESEGAV KRTYLGLGKR
0601: SVGVVQFDTM KNKFLVAGDE FQVKFWDMDS VDLLSSTAAE GGLPSSPCLR INKEGTLLAV STTDNGIKIL ANAEGSRILH SMANRGLDSS RAPPGSVAKG
0701: PIVGTFGTPN SSTGMSLSMG ERSGPVASVT GLNGDNRSLP DVKPRIADDA EKSKTWKLTE ISERSQLRTL RLPDTLLPAR VVKLIYTNSG GAILALAENA
0801: AHKLWKWQKS ERNLLGKANS NVPPQLWQPS SGVLMTNDTR EGNKEDVVPC FALSKNDSYV MSASGGKISL FNMMTFKTMT TFMAPPPAAT SLAFHPQDNN
0901: IIAIGMDDSS IQIYNVRVDE VKSKLKGHQK RVTGLAFSNV LNVLVSSGAD SQLCVWSMDG WEKQASKQIQ IPSGHSPNPL AHTRVQFHQD QIHVLVVHAS
1001: QLAIYEAPKL ENMKQWIPKE SSGSVTDAVY SCDSQSIYAA FDDGSVSILT ATTLQLKCRI GPNSYLPSNP SSRVYPATVA AHPSEPNQFA VGLTDGGVHV
1101: IEPPGPEGKW GISAPPENGA GPSVSSAPGS DQQPR

Arabidopsis Description

WSIP2WUS-interacting protein 2 [Source:TAIR;Acc:AT3G15880]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.