Factsheet for Bra021203.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67912	Canola	cytosol	47.09	99.49
Bra022181.1-P	Field mustard	cytosol	84.7	93.9
AT3G16830.1	Thale cress	cytosol	84.46	93.72
CDY50502	Canola	cytosol, plastid	90.04	88.84
KXG32191	Sorghum	cytosol	64.14	71.56
Zm00001d040279_P012	Maize	cytosol	63.59	70.93
Os01t0254100-01	Rice	nucleus	63.51	70.59
Bra020567.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.76	70.36
TraesCS3D01G179800.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.35	69.98
TraesCS3B01G204200.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.19	69.81
TraesCS3A01G173300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.11	69.72
Bra009930.1-P	Field mustard	cytosol	59.36	69.05
GSMUA_Achr11P...	Banana	cytosol	62.39	68.99
GSMUA_Achr2P00320_001	Banana	cytosol	63.82	67.14
Bra026112.1-P	Field mustard	cytosol	56.26	63.04
Bra003569.1-P	Field mustard	cytosol	54.42	62.72
Bra026751.1-P	Field mustard	cytosol	55.94	62.12
Bra001613.1-P	Field mustard	cytosol	52.75	58.95
Bra021142.1-P	Field mustard	cytosol	52.83	58.52
Bra028653.1-P	Field mustard	mitochondrion	51.63	52.98
Bra006005.1-P	Field mustard	cytosol	43.74	51.12
Zm00001d008338_P001	Maize	cytosol	52.19	47.09
Bra006006.1-P	Field mustard	cytosol	36.1	46.27
Bra000550.1-P	Field mustard	cytosol	13.78	28.13

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	EnsemblPlantsGene:Bra021203	EnsemblPlants:Bra021203.1	EnsemblPlants:Bra021203.1-P
InterPro:CTLH_C	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680
InterPro:IPR006594	InterPro:IPR006595	InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH	UniProt:M4DXF7
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PFscan:PS50896	PFscan:PS50897
PANTHER:PTHR44083	PANTHER:PTHR44083:SF3	InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SMART:SM00667	SMART:SM00668
SUPFAM:SSF50978	SUPFAM:SSF50998	InterPro:Topless_fam	UniParc:UPI00025439DD	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

AT3G16830 (E=0.0) TPR2 | TPR2 (TOPLESS-RELATED 2)

Coordinates

chrA01:-:23371585..23380436

Molecular Weight (calculated)

138819.0 Da

IEP (calculated)

7.382

GRAVY (calculated)

-0.351

Length

1255 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFYFNIKY FEEKALAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTRSAR SIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCNAANGG ARAITPVNLP VAAVARPSNF VPLGVHGGPF QPSAAPAPNP NALAGWMANP HPSSSVPSGV VSASPFQLQQ PNQVNVLKHP RAPSNSLGLM
0301: DYQNADHEQL MKRLRSAQTS NEVTYPAHPP HPSASLDDLP RNVVSTMRQG SVVMSMDFHP AHHTLLAVGC SSGEVSLWEV GSKEKIVTQP FKIWNMAACT
0401: GIFQGTIVKE PSISVTRVAW SPDGNLMGVS FTKHLIHVYA YQGSELRQHL EIDAHVGCVN DLAFAHPNKQ MCVVTCGDDK LIKVWDLSGK KLYTFEGHDA
0501: QVYSICPHQK ENIQFIFSTA LDGKIKAWLY DNVGSRVDYD APGQWRTTML YSADGSRLFS CGTSKEGDSF LVEWNESEGA LKRTYQGFRK KSNGVVQFDT
0601: TRNRYLAVGE DNQVKFWDMD NTNLLTTVDA EGGLPNLPRL RFNKEGNLLA VTTADNGFKI LANADGLRTL RAYEARSYEA SKASIDMKVS TSAMVSSMSP
0701: AAVGKVEHMD TDSPARPTPI HNGIEAMSRT MEKPRHLESV DKKPLELTEI VDPTQCRQVT MPDSKDSVSK VARLLYTNSG VGVLALGANG VQRLWKWSRN
0801: EQNPTGKATA SVTPQHWQPN SGLLMANDVP ENPETAVPCI ALSKNDSYVM SACGGKVSLF NMMTFKVMTT FMPPPPASTF LAFHPQDNNI IAIGMEDSSI
0901: HIYNVRVDEV KTKLKGHQKH ITGLAFSTAL NTLVSSGADA QLFFWTADSW EKKKSSVIQL PPGKAPVGDT RVQFHNDQIH LLVSHETQLA IYDASKMECI
1001: HKWVPQEALS SPITSASYSC NSQLVYASFT DGNIAVFDAE SLRLRCRIAP SAYMPQPTPN SAPIIPQVIT AHPQEPNQLA VGLSDGSVKV IEPSEASRRW
1101: GVGVAVTADK SGAENGRPSS SSAANNSSSD HQIQRESSVY LSVFDCLAKF LNEKFAASGV EPKVVVPANI NPKSAHSEMP LSHCLEDIVG SILTFELKLS
1201: PFNFSTNYQS FTISRFFKSH QRPPLPLFEN HGGDDMPGGS ALKRSPLGLN SRDLN

Best Arabidopsis Sequence Match ( AT3G16830.1 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFFFNIKY FEEKALAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR SIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCSPSNGA RALTPVNLPV AAVARPSNFV PLGVHGGPFQ SNPAPAPNAN ALAGWMANPN PSSSVPSGVV AASPFPMQPS QVNELKHPRA PSNSLGLMDY
0301: QSADHEQLMK RLRSAQTSNE VTYPAHSHPP ASLDDLPRNV VSTIRQGSVV ISMDFHPSHH TLLAVGCSSG EVTLWEVGSR EKVVTEPFKI WNMAACSVIF
0401: QGSIVKEPSI SVTRVAWSPD GNLLGVSFTK HLIHVYAYQG SDLRQHLEID AHVGCVNDLA FAHPNKQMCV VTCGDDKLIK VWDLSGKKLF TFEGHEAPVY
0501: SICPHQKENI QFIFSTALDG KIKAWLYDNV GSRVDYDAPG QWCTTMLYSA DGSRLFSCGT SKEGDSFLVE WNESEGALKR TYLGFRKKSA GVVQFDTTRN
0601: RFLAVGEDNQ IKFWNMDNTN LLTVVEAEGG LPNLPRLRFN KDGNLLAVTT ADNGFKILAN TDGLRTLRAF EARSFEASKA SIDMKVSTSA MASSISPAIG
0701: KIEHMDAGSP ARPTPIPNGI EAMSRTMEKP RNLDSVDKSK PLELTEIVDP TQCRQVTMPD SKDSVSKVAR LLYTNSGVGV LALGSNGVQR LWKWIRNEQN
0801: PTGKATASVT PQHWQPNSGL LMANDVPENP EGSVPCIALS KNDSYVMSAC GGKVSLFNMM TFKVMTTFMP PPPASTFLAF HPQDNNIIAI GMEDSSIHIY
0901: NVRVDEVKTK LKGHQKHITG LAFSTALNIL VSSGADAQLF FWTADSWEKK KSSAIQLPPG KAPVGDTRVQ FHNDQIQLLV SHETQLAIYD ASKMECIHKW
1001: VPQEALSSPI TSASYSCNSQ LVYASFADGN IAVFDAESLR LRCRIAPSAY MPQPTPNSAP IFPQVITAHP QEPNQLAVGL SDGSVKVIEP SELSRRWGVG
1101: VAAGSDKAGT ENGRPSSSSA ANNSSSDQIQ R

Arabidopsis Description

TPR2Topless-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.