Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006005.1-P Field mustard cytosol 65.58 74.67
VIT_11s0016g05620.t01 Wine grape cytosol 67.21 72.61
KRH20137 Soybean endoplasmic reticulum 67.21 72.55
KRH03669 Soybean nucleus 67.13 72.4
PGSC0003DMT400079377 Potato cytosol 63.29 68.25
Bra006006.1-P Field mustard cytosol 54.62 68.23
Solyc07g008040.2.1 Tomato nucleus 60.67 67.64
Bra001613.1-P Field mustard cytosol 60.18 65.54
Bra003569.1-P Field mustard cytosol 58.3 65.47
Bra021142.1-P Field mustard cytosol 60.18 64.96
Bra026751.1-P Field mustard cytosol 59.2 64.07
Bra026112.1-P Field mustard cytosol 58.63 64.02
Bra020567.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 51.19 58.72
Bra009930.1-P Field mustard cytosol 51.19 58.02
Bra022181.1-P Field mustard cytosol 53.64 57.95
Bra021203.1-P Field mustard cytosol 52.98 51.63
Bra000550.1-P Field mustard cytosol 16.43 32.68
Protein Annotations
MapMan:11.2.2.2MapMan:15.5.53.1Gene3D:2.130.10.10EnsemblPlantsGene:Bra028653EnsemblPlants:Bra028653.1EnsemblPlants:Bra028653.1-P
InterPro:CTLH_CGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001680InterPro:IPR006594
InterPro:IPR006595InterPro:IPR015943InterPro:IPR017986InterPro:LisHUniProt:M4EIN8PFAM:PF00400
ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PFscan:PS50896PFscan:PS50897PANTHER:PTHR44083
PANTHER:PTHR44083:SF4SMART:SM00320SMART:SM00667SMART:SM00668SUPFAM:SSF50978InterPro:Topless_fam
UniParc:UPI00025432CAInterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf
SEG:seg:::::
Description
AT3G15880 (E=0.0) WSIP2, TPR4 | protein binding
Coordinates
chrA02:+:2683973..2691187
Molecular Weight (calculated)
134678.0 Da
IEP (calculated)
7.336
GRAVY (calculated)
-0.310
Length
1223 amino acids
Sequence
(BLAST)
0001: MSYQTLHRPR SRIPQRTDRV SFDMLSHLLK HINLFQLRIP NFHPLHDHPK PTHPFPTRSA LPTALMLVNI SMFVSTDARI ILRSVTKTYN LSTVMTSLSR
0101: ELVFLILQFL DEEKYKDTVH RLELESGYYF NMRYFEELVT NGEWDEVEKY LSGFSKLEDN RYSMKIFFEI RKQKYLEALD KRDRAKAVDI LVKDLKVFAG
0201: FNEDLFKEIT LLLTLDDFRA NEQLSKYGDT KSARGVMFGE LKKLIEANPL FRDKLQFPVL KSSRLRTLIN QSLNWQHQLC KNPRPNPDIR SLFLDHTCNQ
0301: PNQPNGARAA SPSPGTNHLM GGGGGVPKIA GFHPLMGGGG GLFQPAPGGP GGLPANLSGW MANQSVVPHP SAAPSGPMGL GSPNNAGAIL KRPQTPSGPI
0401: PMEYQTADSN HVSKRSRPYG TSEEGGNIPV NILPVTYAGH PHGHNNTLSP DDLPKVVVTT LAHGSPVMSI DFHPIQQIVL LVGTIGGDVY LWDLGARQRI
0501: TEKGFDVWKL DACSKELQAS LNADATASVN HVAWSPDGTL FGVAYSKSLV HIYSFQGGSD IRNHLEIEAH TGSVSHLAFS YPNKQLSVVT CGDDRIIKVW
0601: DAVTGEKRYT FEGHEAPVFS VCPHYKENIQ FVFSTATDGK IKAWLYDNVG SRVDYDAPGH SSTRMAYSSD GTRLFSCGTN KEGESFLVEW NESEGSIKRT
0701: YLGLGQRAAG IVQFDTTRNR FLAAGDESTI KIWDMDNTNP LTTIHADGGL PASPCVRFNR EGILLAVSTN DHGVRILATD DGIRLLRTAE TRSFAPVMKV
0801: PAGGGGFGSS SANAGITMAD RTNSFAAMEN NEVRTLVDGK PRIADDLGER SRACKVTEIT EPSQCCSMRL ADNVPVTKVS RLIYTNSGSG VLALASNAVH
0901: KLWKWQKSDH NLAGKATANA QPVLWQPASG IMMTNETSDT NPEDAIPCFA LSKNDSYVMS ASGGKISLFN MMTFKTMTTF MPPPPAATFL AFHPLDNNII
1001: AIGMEDSSIQ IYNVRTDEVK TKLNGHQNRI TGLAFSQALN ILVSSGADSQ LCVWSMDGWE KQSNKYLQVQ HGRSLPAVSD TRVQFHLDQI HLLVVHETQI
1101: AIYDAQKLDW WMQWVRKEAT GPITSATYSC DSQSIFVSFE NGSVDVLTAS NLRLRCRINP TAYLPPNPSS RVYPLVIAAH PSETNQFAVG LNNGAVHVVE
1201: PSETEGKWGT SPPLENGAAV PDN
Best Arabidopsis Sequence Match ( AT1G80490.2 )
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRTSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCRLPNDA RAPSPVNNPL LGSLPKAEGF PPLGAHGPFQ PTPSPVPTPL AGWMSSPSSV PHPAVSGGPI ALGAPSIQAA LKHPRTPPSN SAVDYPSGDS
0301: DHVSKRTRPM GISDEVSLGV NMLPMTFPGQ AHGHNQTFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDIAF STPNKQLCVT TCGDDKTIKV WDAATGVKRY
0501: TFEGHEAPVY SICPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYEAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDTIQ LLTAIDADGG LQASPRIRFN KEGSLLAVSA NDNMIKVMAN SDGLRLLHTV ENLSSESSKP AINSIPMVER
0701: PASVVSIPGM NGDSRNMVDV KPVITEESND KSKVWKLTEV GEPSQCRSLR LPENMRVTKI SRLIFTNSGN AILALASNAI HLLWKWQRND RNATGKATAS
0801: LPPQQWQPAS GILMTNDVAE TNPEEAVPCF ALSKNDSYVM SASGGKISLF NMMTFKTMAT FMPPPPAATF LAFHPQDNNI IAIGMDDSTI QIYNVRVDEV
0901: KSKLKGHSKR ITGLAFSNVL NVLVSSGADA QLCVWNTDGW EKQKSKVLQI PQGRSTSSLS DTRVQFHQDQ VHFLVVHETQ LAIYETTKLE CMKQWPVRES
1001: AAPITHATFS CDSQLIYTSF MDATICVFSS ANLRLRCRVN PSAYLPASLS NSNVHPLVIA AHPQESNMFA VGLSDGGVHI FEPLESEGKW GVAPPPENGS
1101: ASAVTATPSV GASASDQPQR
Arabidopsis Description
TPR1Topless-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV90]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.