Factsheet for Zm00001d045829_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052868_P001	Maize	cytosol, peroxisome, plasma membrane	44.79	61.86
Zm00001d050983_P001	Maize	cytosol	46.01	60.0
Zm00001d004623_P001	Maize	cytosol, plastid	40.8	49.26
Zm00001d027915_P001	Maize	cytosol	43.87	46.13
Zm00001d047897_P013	Maize	cytosol	46.01	13.26
Zm00001d028481_P017	Maize	cytosol	43.87	12.64
Bra003569.1-P	Field mustard	cytosol	38.04	11.39
KRH47407	Soybean	cytosol	38.65	11.15
VIT_09s0002g08370.t01	Wine grape	cytosol	38.65	11.07
AT1G80490.2	Thale cress	cytosol	38.04	11.07
CDX79383	Canola	cytosol	38.04	11.07
Solyc03g117360.2.1	Tomato	nucleus	38.34	11.06
AT1G15750.3	Thale cress	cytosol	38.34	11.05
KRH44501	Soybean	cytosol	38.34	11.03
CDX67950	Canola	cytosol	38.04	11.03
CDY36584	Canola	cytosol	37.73	11.0
Bra026112.1-P	Field mustard	cytosol	37.73	10.98
CDX81729	Canola	cytosol	37.42	10.92
CDY33387	Canola	cytosol	37.42	10.91
Bra026751.1-P	Field mustard	cytosol	37.73	10.88
KRH23604	Soybean	endoplasmic reticulum	37.12	10.69
KRH09700	Soybean	cytosol	36.5	10.53
CDY53312	Canola	cytosol	32.52	9.67
Zm00001d024523_P003	Maize	cytosol	33.13	9.37
VIT_04s0008g06330.t01	Wine grape	extracellular	31.9	9.15
KRH61732	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.46	7.83
VIT_04s0008g06380.t01	Wine grape	cytosol	4.29	7.78
KRH52398	Soybean	cytosol	24.54	7.59
PGSC0003DMT400028457	Potato	cytosol	26.38	7.29
Zm00001d040279_P012	Maize	cytosol	24.54	7.11
Solyc08g029050.2.1	Tomato	cytosol	26.07	6.96
VIT_04s0008g06390.t01	Wine grape	extracellular	3.07	4.57
Zm00001d008338_P001	Maize	cytosol	18.4	4.31
VIT_04s0008g06340.t01	Wine grape	cytosol	2.15	4.07
CDX79301	Canola	cytosol	1.84	2.76
Solyc03g117380.2.1	Tomato	cytosol	0.31	2.7
KRH05196	Soybean	cytosol	4.29	2.58
VIT_04s0008g06400.t01	Wine grape	mitochondrion	1.23	1.97

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A1D6NZG0	ProteinID:AQL03289.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR015943	PANTHER:PTHR44083	PANTHER:PTHR44083:SF2	SUPFAM:SSF50978	InterPro:Topless_fam
UniParc:UPI000844F8BE	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d045829	EnsemblPlants:Zm00001d045829_P001	EnsemblPlants:Zm00001d045829_T001
SEG:seg	:	:	:	:	:

Description

Topless-related protein 2

Coordinates

chr9:+:42339805..42342547

Molecular Weight (calculated)

36728.3 Da

IEP (calculated)

8.691

GRAVY (calculated)

-0.059

Length

326 amino acids

Sequence
(BLAST)

001: MALQPRKLAA YWILASHRRR SLPLHLLSEV LRMPQPVAFV SVQPSDGQPT PSNVLNKKMK HGGESQNYQQ DDFHKTVART LSQGSTPMSM DFHPLQQTLL
101: NVGTNVGDIG SWDVSTKDRL VVRNFKVWDL SKCTIILQAS LVKDPVVSVN RIIWSPDGTL FGVAYSRHIV QIYSYNGGDD IRQHLELSEN MSLKLDKLLS
201: SSTNNFWASG LVFVMVPRHL AFMINGVSQA LCCSYTVMLS CKLYFGYFIP VAAPYSTIIN FRVEGFNLLS TSSRVICSFE GRCILQEDTN SVAENAEYKD
301: RDIESLSLCC YVLGPRGRGF YKYLYL

Best Arabidopsis Sequence Match ( AT1G15750.1 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.