Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400028457 | Potato | cytosol | 85.83 | 88.81 |
| Solyc03g117360.2.1 | Tomato | nucleus | 43.49 | 46.99 |
| Solyc03g116750.2.1 | Tomato | nucleus | 41.69 | 44.96 |
| VIT_04s0008g06340.t01 | Wine grape | cytosol | 6.31 | 44.77 |
| Solyc07g008040.2.1 | Tomato | nucleus | 39.97 | 44.48 |
| Solyc03g117380.2.1 | Tomato | cytosol | 1.31 | 43.24 |
| Solyc03g117370.2.1 | Tomato | cytosol | 14.33 | 43.21 |
| VIT_04s0008g06330.t01 | Wine grape | extracellular | 40.21 | 43.18 |
| Solyc01g100050.2.1 | Tomato | nucleus | 39.15 | 42.23 |
| KRH05196 | Soybean | cytosol | 18.67 | 41.99 |
| Solyc05g016070.1.1 | Tomato | cytosol | 4.5 | 41.98 |
| Solyc08g076030.2.1 | Tomato | nucleus | 38.98 | 41.94 |
| KRH61732 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.87 | 41.32 |
| KRH52398 | Soybean | cytosol | 35.3 | 40.89 |
| Solyc03g117410.2.1 | Tomato | cytosol | 3.69 | 31.47 |
| Zm00001d050983_P001 | Maize | cytosol | 6.39 | 31.2 |
| Zm00001d004623_P001 | Maize | cytosol, plastid | 6.88 | 31.11 |
| Zm00001d027915_P001 | Maize | cytosol | 6.72 | 26.45 |
| Zm00001d045829_P001 | Maize | mitochondrion | 6.96 | 26.07 |
| CDX79301 | Canola | cytosol | 4.5 | 25.35 |
| Zm00001d052868_P001 | Maize | cytosol, peroxisome, plasma membrane | 4.59 | 23.73 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:K4CJW8 |
| InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 |
| PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF2 | SMART:SM00320 | SMART:SM00667 | SMART:SM00668 |
| SUPFAM:SSF50978 | EnsemblPlantsGene:Solyc08g029050.2 | EnsemblPlants:Solyc08g029050.2.1 | InterPro:Topless_fam | UniParc:UPI000276BE89 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
No Description!
Coordinates
chr8:-:38291703..38299765
Molecular Weight (calculated)
134188.0 Da
IEP (calculated)
5.754
GRAVY (calculated)
-0.266
Length
1221 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLSKDLIFL ILQFCKEENF TKTARMLGQE SELFFDMGHI EALVLGGKWD EIENYLSGFT GVTESRYSKK MFFEIRKQKF LEALDRQDRK TALEILMKDL
0101: QVFAETNKEL YAEMTQLLTF DNFREHPSLA LYGDTLTARN RIMKILRVVI ETNPQLNGKL HFPELTKSRL RRLINQSLNW QHAHCANPQQ EPEIKTLFID
0201: HKCSIPEDQS IMQRPGPTQT ISAATPDHLV LQMPRPSKII SAATPAQSDT QMPRPSNTIS AAAPDKSIMQ MPKPSKAISA ATPAQLVKQM PGPSKAISAA
0301: TPAQPDTQMP RPSNTISATT PDQLIIQMPK PSETTSASNP DQSVVQMPRP SETTSASNPD QSITQMPMPS KTISSANPDC QQIHYSSSSI VTDDIASAST
0401: SKAVQDSGNL SDVNTTRNMN EKVLSKTAPC QDQDASVNLS DDFPKTVERV LTIGNPPTAS DYPTIRSIYP TVNYYPTTMD FHPVQQTLLI VGDGGGSVEL
0501: WDVSSGKMLF RRTLMIWEVE VFSPDFLKSM GEDPRISVNR VLWNPDGSLF GVASSKNIVQ LYSYHNNDNH AENHLEIEAH FGSINDLAFS KPNNQLLVIT
0601: CGEDMLVKVW NANNGAKQYT FEGHKAPVYS LCPHEKEDVH FILSTSTNGE IKAWIYENSG PCVSYEAPSK CCMRMLYSAN GKRLFSCGTN KDGDSHLVEW
0701: NETDGFIVRT YLGLGKCSSG VVEFDISRNN YVAAGDSHVI KFWNVNDAQL LTVVDAGGDL PASPYVRFNK NGTLLAVSVD HNSVKILAND GGRILLQTSL
0801: DASTYLSTRE LAGNSLSGPA NSSSIDGIVP PEMTAENLAK MEHHKILGNP STSKVVQISR CQSLRLPSEV KTNKVCRLAY AQAGNILVAL VTGGIHLIWK
0901: WSESDSNLTG QTTPKCTPQL WQPRSGVVPE NSLLSSDAGA VSPCIALTNN GFYALSASGG AVSIFNINLY KIMKSITPPK PAATCIACHP TNNNVIAVGM
1001: DDLTIIVYSV RTEELISRLN GHSKRITGLA FSNTMNVLVS SGADSQIVVW NSTNWEREGS TMLQTSADWL PTEVSETSVE FQRDEKCFLV VHETQIAIYE
1101: PTKLECVKQW IIKNFCARIS HATFSCDSEW IYAVMKDGIV LILSASDLSP KYEIDPSTFL TSDLSCSAHV FPVVVAAHPE NPNQLALGLN DGGVVVIEPS
1201: ESDGKWCEPP NATTLTNEQP I
0101: QVFAETNKEL YAEMTQLLTF DNFREHPSLA LYGDTLTARN RIMKILRVVI ETNPQLNGKL HFPELTKSRL RRLINQSLNW QHAHCANPQQ EPEIKTLFID
0201: HKCSIPEDQS IMQRPGPTQT ISAATPDHLV LQMPRPSKII SAATPAQSDT QMPRPSNTIS AAAPDKSIMQ MPKPSKAISA ATPAQLVKQM PGPSKAISAA
0301: TPAQPDTQMP RPSNTISATT PDQLIIQMPK PSETTSASNP DQSVVQMPRP SETTSASNPD QSITQMPMPS KTISSANPDC QQIHYSSSSI VTDDIASAST
0401: SKAVQDSGNL SDVNTTRNMN EKVLSKTAPC QDQDASVNLS DDFPKTVERV LTIGNPPTAS DYPTIRSIYP TVNYYPTTMD FHPVQQTLLI VGDGGGSVEL
0501: WDVSSGKMLF RRTLMIWEVE VFSPDFLKSM GEDPRISVNR VLWNPDGSLF GVASSKNIVQ LYSYHNNDNH AENHLEIEAH FGSINDLAFS KPNNQLLVIT
0601: CGEDMLVKVW NANNGAKQYT FEGHKAPVYS LCPHEKEDVH FILSTSTNGE IKAWIYENSG PCVSYEAPSK CCMRMLYSAN GKRLFSCGTN KDGDSHLVEW
0701: NETDGFIVRT YLGLGKCSSG VVEFDISRNN YVAAGDSHVI KFWNVNDAQL LTVVDAGGDL PASPYVRFNK NGTLLAVSVD HNSVKILAND GGRILLQTSL
0801: DASTYLSTRE LAGNSLSGPA NSSSIDGIVP PEMTAENLAK MEHHKILGNP STSKVVQISR CQSLRLPSEV KTNKVCRLAY AQAGNILVAL VTGGIHLIWK
0901: WSESDSNLTG QTTPKCTPQL WQPRSGVVPE NSLLSSDAGA VSPCIALTNN GFYALSASGG AVSIFNINLY KIMKSITPPK PAATCIACHP TNNNVIAVGM
1001: DDLTIIVYSV RTEELISRLN GHSKRITGLA FSNTMNVLVS SGADSQIVVW NSTNWEREGS TMLQTSADWL PTEVSETSVE FQRDEKCFLV VHETQIAIYE
1101: PTKLECVKQW IIKNFCARIS HATFSCDSEW IYAVMKDGIV LILSASDLSP KYEIDPSTFL TSDLSCSAHV FPVVVAAHPE NPNQLALGLN DGGVVVIEPS
1201: ESDGKWCEPP NATTLTNEQP I
0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R
Arabidopsis Description
TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.