Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g117410.2.1 | Tomato | cytosol | 40.46 | 37.06 |
| Solyc03g117370.2.1 | Tomato | cytosol | 41.98 | 13.58 |
| PGSC0003DMT400036649 | Potato | cytosol | 45.04 | 12.12 |
| PGSC0003DMT400036648 | Potato | plastid | 53.44 | 7.98 |
| Solyc07g008040.2.1 | Tomato | nucleus | 64.12 | 7.66 |
| Solyc03g117360.2.1 | Tomato | nucleus | 58.78 | 6.81 |
| Solyc03g116750.2.1 | Tomato | nucleus | 56.49 | 6.54 |
| Solyc08g076030.2.1 | Tomato | nucleus | 56.49 | 6.52 |
| TraesCS4D01G221200.1 | Wheat | cytosol | 55.73 | 6.44 |
| TraesCS4A01G083300.2 | Wheat | cytosol | 55.73 | 6.43 |
| TraesCS4B01G220900.3 | Wheat | cytosol | 55.73 | 6.43 |
| GSMUA_Achr6P36440_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 56.49 | 6.41 |
| EER92538 | Sorghum | cytosol | 54.96 | 6.4 |
| Zm00001d047897_P013 | Maize | cytosol | 54.96 | 6.37 |
| Zm00001d028481_P017 | Maize | cytosol | 54.96 | 6.37 |
| Os03t0254700-01 | Rice | cytosol | 54.96 | 6.35 |
| GSMUA_Achr4P09920_001 | Banana | cytosol | 55.73 | 6.35 |
| HORVU0Hr1G008690.1 | Barley | cytosol, endoplasmic reticulum | 54.96 | 6.34 |
| Solyc01g100050.2.1 | Tomato | nucleus | 54.2 | 6.27 |
| GSMUA_Achr6P22950_001 | Banana | plasma membrane | 55.73 | 5.9 |
| Solyc03g117380.2.1 | Tomato | cytosol | 1.53 | 5.41 |
| Solyc08g029050.2.1 | Tomato | cytosol | 41.98 | 4.5 |
| PGSC0003DMT400036646 | Potato | cytosol, plastid | 5.34 | 2.29 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001680 |
| InterPro:IPR015943 | UniProt:K4BYX2 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF4 | SMART:SM00320 | SUPFAM:SSF50978 |
| EnsemblPlantsGene:Solyc05g016070.1 | EnsemblPlants:Solyc05g016070.1.1 | InterPro:Topless_fam | UniParc:UPI0002766C85 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom_sf | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:14433378..14434308
Molecular Weight (calculated)
14438.3 Da
IEP (calculated)
8.423
GRAVY (calculated)
-0.161
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSTNFENGP EMTDTRQGSI VPQLWQPASG TVITNDTKDV ISYFASSKND SYVMSASGGK ISLFDMMTFK VKTKLKGQQK RINGLAFSNS LTVLISAGAN
101: SQVIEFDIDA SRQIPYLKEK YIYCTLGEFV A
101: SQVIEFDIDA SRQIPYLKEK YIYCTLGEFV A
0001: MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFFFNMRY FEDSVTAGEW DDVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKKDH AKAVDILVKE
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHTCGHPNGA HTPSPTTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVQ HPTVSAGPIG LGAPNSAVSM LKRERPRSPP TNSLSMDYQT
0301: ADSESVLKRP RPFGISDGVN NLPVNVLPVT YPGQSHAHAT YSTDDLPKNV SRILSQGSAI KSMDFHPVQQ TMLLVGTNLG DIAIWEVGSR EKLVSRSFKV
0401: WDLATCTVNL QASLASEYTA AVNRVVWSPD GGLLGVAYSK HIVHIYSYHG GEDLRNHLEI DAHAGNVNDL AFSQPNQQLC VVTCGEDKTI KVWDAVTGNK
0501: LHTFEGHEAP VYSFIFSTAV DGKIKAWLYD NMGSRVDYDA PGRSCTSMAY CADGTRLFSC GTSKEGESFI VEWNESEGAV KRTYLGLGKR SVGVVQFDTM
0601: KNKFLVAGDE FQVKFWDMDS VDLLSSTAAE GGLPSSPCLR INKEGTLLAV STTDNGIKIL ANAEGSRILH SMANRGLDSS RAPPGSVAKG PIVGTFGTPN
0701: SSTGMSLSMG ERSGPVASVT GLNGDNRSLP DVKPRIADDA EKSKTWKLTE ISERSQLRTL RLPDTLLPAR VVKLIYTNSG GAILALAENA AHKLWKWQKS
0801: ERNLLGKANS NVPPQLWQPS SGVLMTNDTR EGNKEDVVPC FALSKNDSYV MSASGGKISL FNMMTFKTMT TFMAPPPAAT SLAFHPQDNN IIAIGMDDSS
0901: IQIYNVRVDE VKSKLKGHQK RVTGLAFSNV LNVLVSSGAD SQLCVWSMDG WEKQASKQIQ IPSGHSPNPL AHTRVQFHQD QIHVLVVHAS QLAIYEAPKL
1001: ENMKQWIPKE SSGSVTDAVY SCDSQSIYAA FDDGSVSILT ATTLQLKCRI GPNSYLPSNP SSRVYPATVA AHPSEPNQFA VGLTDGGVHV IEPPGPEGKW
1101: GISAPPENGA GPSVSSAPGS DQQPR
0101: LKVFSTFNEE LFKEITMLLT LTNFRENEQL SKYGDTKSAR GIMLGELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHTCGHPNGA HTPSPTTNHL MGSVPKVGGF PPLGAHGPFQ PTPAPLTTSL AGWMPNPSVQ HPTVSAGPIG LGAPNSAVSM LKRERPRSPP TNSLSMDYQT
0301: ADSESVLKRP RPFGISDGVN NLPVNVLPVT YPGQSHAHAT YSTDDLPKNV SRILSQGSAI KSMDFHPVQQ TMLLVGTNLG DIAIWEVGSR EKLVSRSFKV
0401: WDLATCTVNL QASLASEYTA AVNRVVWSPD GGLLGVAYSK HIVHIYSYHG GEDLRNHLEI DAHAGNVNDL AFSQPNQQLC VVTCGEDKTI KVWDAVTGNK
0501: LHTFEGHEAP VYSFIFSTAV DGKIKAWLYD NMGSRVDYDA PGRSCTSMAY CADGTRLFSC GTSKEGESFI VEWNESEGAV KRTYLGLGKR SVGVVQFDTM
0601: KNKFLVAGDE FQVKFWDMDS VDLLSSTAAE GGLPSSPCLR INKEGTLLAV STTDNGIKIL ANAEGSRILH SMANRGLDSS RAPPGSVAKG PIVGTFGTPN
0701: SSTGMSLSMG ERSGPVASVT GLNGDNRSLP DVKPRIADDA EKSKTWKLTE ISERSQLRTL RLPDTLLPAR VVKLIYTNSG GAILALAENA AHKLWKWQKS
0801: ERNLLGKANS NVPPQLWQPS SGVLMTNDTR EGNKEDVVPC FALSKNDSYV MSASGGKISL FNMMTFKTMT TFMAPPPAAT SLAFHPQDNN IIAIGMDDSS
0901: IQIYNVRVDE VKSKLKGHQK RVTGLAFSNV LNVLVSSGAD SQLCVWSMDG WEKQASKQIQ IPSGHSPNPL AHTRVQFHQD QIHVLVVHAS QLAIYEAPKL
1001: ENMKQWIPKE SSGSVTDAVY SCDSQSIYAA FDDGSVSILT ATTLQLKCRI GPNSYLPSNP SSRVYPATVA AHPSEPNQFA VGLTDGGVHV IEPPGPEGKW
1101: GISAPPENGA GPSVSSAPGS DQQPR
Arabidopsis Description
WSIP2WUS-interacting protein 2 [Source:TAIR;Acc:AT3G15880]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.