Factsheet for Zm00001d047897_P013

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92538	Sorghum	cytosol	97.26	97.78
Zm00001d028481_P017	Maize	cytosol	97.17	97.17
Os03t0254700-01	Rice	cytosol	92.22	92.06
HORVU0Hr1G008690.1	Barley	cytosol, endoplasmic reticulum	90.89	90.49
TraesCS4D01G221200.1	Wheat	cytosol	90.63	90.39
TraesCS4B01G220900.3	Wheat	cytosol	90.72	90.32
TraesCS4A01G083300.2	Wheat	cytosol	90.63	90.31
GSMUA_Achr4P09920_001	Banana	cytosol	83.82	82.43
GSMUA_Achr6P36440_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.02	81.37
PGSC0003DMT400036646	Potato	cytosol, plastid	20.78	76.8
GSMUA_Achr6P22950_001	Banana	plasma membrane	83.29	76.09
PGSC0003DMT400036648	Potato	plastid	58.18	75.03
Zm00001d024523_P003	Maize	cytosol	68.7	67.39
Zm00001d050983_P001	Maize	cytosol	13.79	62.4
Zm00001d040279_P012	Maize	cytosol	61.1	61.42
PGSC0003DMT400036649	Potato	cytosol	26.44	61.4
Zm00001d004623_P001	Maize	cytosol, plastid	13.44	56.3
Solyc05g016070.1.1	Tomato	cytosol	6.37	54.96
Zm00001d027915_P001	Maize	cytosol	13.79	50.32
Zm00001d045829_P001	Maize	mitochondrion	13.26	46.01
Zm00001d052868_P001	Maize	cytosol, peroxisome, plasma membrane	8.84	42.37
Zm00001d008338_P001	Maize	cytosol	51.72	42.06

Protein Annotations

MapMan:11.2.2.2	MapMan:15.5.53.1	Gene3D:2.130.10.10	UniProt:A0A1D6PEK8	ProteinID:AQL07976.1	InterPro:CTLH_C
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001680	InterPro:IPR006594	InterPro:IPR006595
InterPro:IPR015943	InterPro:IPR017986	InterPro:LisH	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PFscan:PS50896	PFscan:PS50897	PANTHER:PTHR44083	PANTHER:PTHR44083:SF2	SMART:SM00320
SMART:SM00667	SMART:SM00668	SUPFAM:SSF50978	InterPro:Topless_fam	UniParc:UPI00084457CF	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d047897	EnsemblPlants:Zm00001d047897_P013
EnsemblPlants:Zm00001d047897_T013	SEG:seg	:	:	:	:

Description

Protein TOPLESS

Coordinates

chr9:+:144666992..144678929

Molecular Weight (calculated)

125058.0 Da

IEP (calculated)

7.048

GRAVY (calculated)

-0.331

Length

1131 amino acids

Sequence
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVVNGNW DEVERYLGGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD
0101: LKVFASFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMFVELKKL IEANPLFRDK LQFPSLKNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGQPNGA RAPSPANNPL LGSMPKPGGF PPLGAHGPFQ PSPTPVPPLA GWMSNPPAVT HPAVSGGAIG FGTPTNPAAL LKHPRTPTTA NPGMDYPSGD
0301: SDHISKRTRP VGMSEEVNLP VNMLPVTYPQ SHNYQQDDFH KTVARTLSQG STPMSMDFHP LQQTLLLVGT NVGDIGLWDV GTKDRLVVRN FKVWDLSKCT
0401: MILQASLVKD PAVSVNRIIW SPDGTLFGVA YSRHIVQIYS YNGGDDIRQH LEIDAHIGGV NDIAFAHPNK QLCIITCGDD KTIKVWEATS GAKQFTFEGH
0501: EAPVYSVCPH YKENIQFIFS TALDGKIKAW LYDNMGSRVD YDAPGHWCTT MAYSADGSRL FSCGTSKDGE SHLVEWNESE GAVKRTYQGF RKRSMGVVQF
0601: DTTRNRFLAA GDEFMIKIWD MDSTGLLTTI DADGGLIASP RIRFNKEGTL LAVSTVDNGI KILANADGLR LLRTLENRSF DASRNASEAV TKPLINPLTA
0701: AANAAAASSS GAGAPSAVTA MNEQNGDTRS LVDVKPRIAD ESLDKSKAWK LMEITESTQC RSIKLADNMR TSKISRLIYT NSGLAILALT SSAVHLLWKW
0801: PRSDRNSGKA SASVSPTLWQ PPSGILMTND TTDNNPEEAV HCFALSKNDS YVMSASGGKI SLFNMMTFKT MTTFMPAPPA ATFLAFHPQD NNIIAIGMDD
0901: STIQIYNVRI DEVKSKLRGH SKRITGLAFS NVLNVLVSSG ADAQLCVWNT DGWEKQKNRF LQIPSGRQSN ILDTRVQFHQ DQMHFLVVHE TQIAIYETTK
1001: LEPVKQWPVR ENSPPITHAA FSCDSQLIYA SFMDATVGIF NASSLRLQCR ILPASYLPPN ISPSVHPVVV AAHPSEASQF ALGLTDGGVF VLEPLESDRK
1101: WGNPPPVENG SASNLSAPPP NGASSSDQPE R

Best Arabidopsis Sequence Match ( AT1G15750.3 )
(BLAST)

0001: MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDKHDR PKAVDILVKD
0101: LKVFSTFNEE LFKEITQLLT LENFRENEQL SKYGDTKSAR AIMLVELKKL IEANPLFRDK LQFPTLRNSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFV
0201: DHSCGPPNGA RAPSPVNNPL LGGIPKAGGF PPLGAHGPFQ PTASPVPTPL AGWMSSPSSV PHPAVSAGAI ALGGPSIPAA LKHPRTPPTN ASLDYPSADS
0301: EHVSKRTRPM GISDEVNLGV NMLPMSFSGQ AHGHSPAFKA PDDLPKTVAR TLSQGSSPMS MDFHPIKQTL LLVGTNVGDI GLWEVGSRER LVQKTFKVWD
0401: LSKCSMPLQA ALVKEPVVSV NRVIWSPDGS LFGVAYSRHI VQLYSYHGGE DMRQHLEIDA HVGGVNDISF STPNKQLCVI TCGDDKTIKV WDAATGVKRH
0501: TFEGHEAPVY SVCPHYKENI QFIFSTALDG KIKAWLYDNM GSRVDYDAPG RWCTTMAYSA DGTRLFSCGT SKDGESFIVE WNESEGAVKR TYQGFHKRSL
0601: GVVQFDTTKN RYLAAGDDFS IKFWDMDAVQ LLTAIDGDGG LQASPRIRFN KEGSLLAVSG NENVIKIMAN SDGLRLLHTF ENISSESSKP AINSIAAAAA
0701: AAATSAGHAD RSANVVSIQG MNGDSRNMVD VKPVITEESN DKSKIWKLTE VSEPSQCRSL RLPENLRVAK ISRLIFTNSG NAILALASNA IHLLWKWQRN
0801: ERNATGKATA SLPPQQWQPA SGILMTNDVA ETNPEEAVPC FALSKNDSYV MSASGGKISL FNMMTFKTMA TFMPPPPAAT FLAFHPQDNN IIAIGMDDST
0901: IQIYNVRVDE VKSKLKGHSK RITGLAFSNV LNVLVSSGAD AQLCVWNTDG WEKQRSKVLP LPQGRPNSAP SDTRVQFHQD QAHFLVVHET QLAIYETTKL
1001: ECMKQWAVRE SLAPITHATF SCDSQLVYAS FMDATVCVFS SANLRLRCRV NPSAYLPASL SNSNVHPLVI AAHPQEPNMF AVGLSDGGVH IFEPLESEGK
1101: WGVAPPAENG SASGAPTAPS VGASASDQPQ R

Arabidopsis Description

TPLProtein TOPLESS [Source:UniProtKB/Swiss-Prot;Acc:Q94AI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.