Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022181.1-P | Field mustard | cytosol | 99.65 | 99.65 |
| CDX95900 | Canola | cytosol | 98.23 | 97.89 |
| CDY67912 | Canola | cytosol | 49.29 | 93.94 |
| AT3G16830.1 | Thale cress | cytosol | 91.96 | 92.04 |
| CDY50500 | Canola | cytosol | 39.93 | 89.5 |
| CDY50502 | Canola | cytosol, plastid | 93.9 | 83.57 |
| KXG32191 | Sorghum | cytosol | 70.49 | 70.93 |
| Zm00001d040279_P012 | Maize | cytosol | 69.79 | 70.22 |
| Os01t0254100-01 | Rice | nucleus | 69.96 | 70.15 |
| TraesCS3D01G179800.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.7 | 69.45 |
| TraesCS3B01G204200.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.61 | 69.37 |
| CDX80607 | Canola | cytosol | 68.29 | 69.2 |
| TraesCS3A01G173300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.43 | 69.19 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 67.84 | 69.13 |
| CDY25010 | Canola | cytosol | 67.84 | 69.06 |
| CDX88252 | Canola | cytosol | 66.96 | 68.35 |
| GSMUA_Achr11P... | Banana | cytosol | 68.37 | 68.19 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 70.41 | 66.81 |
| CDY36584 | Canola | cytosol | 62.46 | 63.24 |
| CDY33387 | Canola | cytosol | 62.1 | 62.88 |
| CDY53312 | Canola | cytosol | 60.87 | 62.87 |
| CDX81729 | Canola | cytosol | 61.93 | 62.76 |
| CDX67950 | Canola | cytosol | 61.93 | 62.37 |
| CDX79383 | Canola | cytosol | 61.57 | 62.23 |
| CDX75851 | Canola | cytosol | 59.28 | 59.22 |
| CDX82426 | Canola | cytosol | 59.28 | 59.22 |
| CDY20161 | Canola | cytosol | 58.75 | 58.69 |
| CDY21881 | Canola | cytosol | 58.48 | 58.43 |
| Zm00001d008338_P001 | Maize | cytosol | 57.16 | 46.51 |
| CDY04683 | Canola | mitochondrion | 4.86 | 44.35 |
| CDX79301 | Canola | cytosol | 6.45 | 33.64 |
| CDX83225 | Canola | cytosol | 18.9 | 28.61 |
| CDY38509 | Canola | cytosol | 19.35 | 28.59 |
| CDY12727 | Canola | golgi | 7.24 | 23.63 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078DS45 | EnsemblPlants:CDX92100 | ProteinID:CDX92100 |
| ProteinID:CDX92100.1 | InterPro:CTLH_C | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00153788001 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:LisH | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 |
| PFscan:PS50897 | PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 | InterPro:Quino_amine_DH_bsu | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 |
| SMART:SM00667 | SMART:SM00668 | SUPFAM:SSF50969 | SUPFAM:SSF50978 | SUPFAM:SSF50998 | InterPro:Topless_fam |
| UniParc:UPI0004EDB02C | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g23070D
Coordinates
chrLK031871:+:186613..192607
Molecular Weight (calculated)
125018.0 Da
IEP (calculated)
7.425
GRAVY (calculated)
-0.355
Length
1132 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFYFNIKY FEEKALAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR NIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCNAANGG ARALTPVNLP VAAVARPSNF VPLGVHGGPF QPTPAPAPNP NALAGWMANP NPSSSVPSGV VASTSPFPMQ QPNQVNALKH PRPPSNSLGL
0301: MDYQNAADHD QLMRRLRSAQ NEVTYPAHSH PPSASLDDLP RNVVSTMRQG SVVMSMDFHP AHHTLLAVGG SSGEVSLWEV GSREKIVTEP FKIWNMSACS
0401: GVLQGTIVKE PSISVTRVAW SPDGNFIGVS FTKHLIHVYA YQGSDLRQHL EIEAHVGRVN DLAFAHPNKQ ICIVTCGDDK LIKVWDINGK KLYTFEGHEA
0501: SVYSICPHQK ENIQFIFSTA LDGKIKAWLY DNVGSRVDYD APGQWCTTML YSADGSRLFS CGTSKEGDSF LVEWNESEGA LKRTYVGFRK KSNGVVQFDT
0601: TRNRFLAVGE DNQVKFWDMD NTNLLTTIEA EGGLPSLPRL RFNKEGNLLA VSTADNGFKI LANADGLRTL RAYEASKASI EMKVSTSAMV SALSPVVGKI
0701: EHMDTSSPAR PTPIPNGIEA MSRSIEKPRN LESVVDKSKP LELTEIVDPT QCRQVTMPDS KDSVSKVARL LYTNSGVGVL ALGANGVQRL WKWSRNEQNP
0801: TGKATANLTP QHWQPNSGLL MANDVSENPE SAVPCIALSK NDSYVMSACG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNIIAIG MEDSSIHIYN
0901: VRVDEVKTKL KGHQKHITGL AFSTALNTLV SSGADAQLFF WTADTWEKKK SSAISLPPGK APVGDTRVQF HNDQVHLLVS HETQLAIYDA TKMECIHKWV
1001: PQEALSSPIT SASYSCNSQL VYASFADGNI AVFDADSLRL RCRIAPSAYM PQPTPNSAPI IPQVITTHPQ EPNQLAVGLS DGSVKVIEPS EASRRWGVGV
1101: AVTADKSGNE NGRPSSSSAA NNNSSSDHQM QR
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR NIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCNAANGG ARALTPVNLP VAAVARPSNF VPLGVHGGPF QPTPAPAPNP NALAGWMANP NPSSSVPSGV VASTSPFPMQ QPNQVNALKH PRPPSNSLGL
0301: MDYQNAADHD QLMRRLRSAQ NEVTYPAHSH PPSASLDDLP RNVVSTMRQG SVVMSMDFHP AHHTLLAVGG SSGEVSLWEV GSREKIVTEP FKIWNMSACS
0401: GVLQGTIVKE PSISVTRVAW SPDGNFIGVS FTKHLIHVYA YQGSDLRQHL EIEAHVGRVN DLAFAHPNKQ ICIVTCGDDK LIKVWDINGK KLYTFEGHEA
0501: SVYSICPHQK ENIQFIFSTA LDGKIKAWLY DNVGSRVDYD APGQWCTTML YSADGSRLFS CGTSKEGDSF LVEWNESEGA LKRTYVGFRK KSNGVVQFDT
0601: TRNRFLAVGE DNQVKFWDMD NTNLLTTIEA EGGLPSLPRL RFNKEGNLLA VSTADNGFKI LANADGLRTL RAYEASKASI EMKVSTSAMV SALSPVVGKI
0701: EHMDTSSPAR PTPIPNGIEA MSRSIEKPRN LESVVDKSKP LELTEIVDPT QCRQVTMPDS KDSVSKVARL LYTNSGVGVL ALGANGVQRL WKWSRNEQNP
0801: TGKATANLTP QHWQPNSGLL MANDVSENPE SAVPCIALSK NDSYVMSACG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNIIAIG MEDSSIHIYN
0901: VRVDEVKTKL KGHQKHITGL AFSTALNTLV SSGADAQLFF WTADTWEKKK SSAISLPPGK APVGDTRVQF HNDQVHLLVS HETQLAIYDA TKMECIHKWV
1001: PQEALSSPIT SASYSCNSQL VYASFADGNI AVFDADSLRL RCRIAPSAYM PQPTPNSAPI IPQVITTHPQ EPNQLAVGLS DGSVKVIEPS EASRRWGVGV
1101: AVTADKSGNE NGRPSSSSAA NNNSSSDHQM QR
0001: MSSLSRELVF LILQFLDEEK FKESVHKLEQ ESGFFFNIKY FEEKALAGEW DEVEKYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRNDR AKAVEILAKD
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR SIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCSPSNGA RALTPVNLPV AAVARPSNFV PLGVHGGPFQ SNPAPAPNAN ALAGWMANPN PSSSVPSGVV AASPFPMQPS QVNELKHPRA PSNSLGLMDY
0301: QSADHEQLMK RLRSAQTSNE VTYPAHSHPP ASLDDLPRNV VSTIRQGSVV ISMDFHPSHH TLLAVGCSSG EVTLWEVGSR EKVVTEPFKI WNMAACSVIF
0401: QGSIVKEPSI SVTRVAWSPD GNLLGVSFTK HLIHVYAYQG SDLRQHLEID AHVGCVNDLA FAHPNKQMCV VTCGDDKLIK VWDLSGKKLF TFEGHEAPVY
0501: SICPHQKENI QFIFSTALDG KIKAWLYDNV GSRVDYDAPG QWCTTMLYSA DGSRLFSCGT SKEGDSFLVE WNESEGALKR TYLGFRKKSA GVVQFDTTRN
0601: RFLAVGEDNQ IKFWNMDNTN LLTVVEAEGG LPNLPRLRFN KDGNLLAVTT ADNGFKILAN TDGLRTLRAF EARSFEASKA SIDMKVSTSA MASSISPAIG
0701: KIEHMDAGSP ARPTPIPNGI EAMSRTMEKP RNLDSVDKSK PLELTEIVDP TQCRQVTMPD SKDSVSKVAR LLYTNSGVGV LALGSNGVQR LWKWIRNEQN
0801: PTGKATASVT PQHWQPNSGL LMANDVPENP EGSVPCIALS KNDSYVMSAC GGKVSLFNMM TFKVMTTFMP PPPASTFLAF HPQDNNIIAI GMEDSSIHIY
0901: NVRVDEVKTK LKGHQKHITG LAFSTALNIL VSSGADAQLF FWTADSWEKK KSSAIQLPPG KAPVGDTRVQ FHNDQIQLLV SHETQLAIYD ASKMECIHKW
1001: VPQEALSSPI TSASYSCNSQ LVYASFADGN IAVFDAESLR LRCRIAPSAY MPQPTPNSAP IFPQVITAHP QEPNQLAVGL SDGSVKVIEP SELSRRWGVG
1101: VAAGSDKAGT ENGRPSSSSA ANNSSSDQIQ R
0101: LKVFATFNEE LYKEITQLLT LENFRENEQL SKYGDTKSAR SIMYTELKKL IEANPLFREK LAFPSFKASR LRTLINQSLN WQHQLCKNPR PNPDIKTLFL
0201: DHSCSPSNGA RALTPVNLPV AAVARPSNFV PLGVHGGPFQ SNPAPAPNAN ALAGWMANPN PSSSVPSGVV AASPFPMQPS QVNELKHPRA PSNSLGLMDY
0301: QSADHEQLMK RLRSAQTSNE VTYPAHSHPP ASLDDLPRNV VSTIRQGSVV ISMDFHPSHH TLLAVGCSSG EVTLWEVGSR EKVVTEPFKI WNMAACSVIF
0401: QGSIVKEPSI SVTRVAWSPD GNLLGVSFTK HLIHVYAYQG SDLRQHLEID AHVGCVNDLA FAHPNKQMCV VTCGDDKLIK VWDLSGKKLF TFEGHEAPVY
0501: SICPHQKENI QFIFSTALDG KIKAWLYDNV GSRVDYDAPG QWCTTMLYSA DGSRLFSCGT SKEGDSFLVE WNESEGALKR TYLGFRKKSA GVVQFDTTRN
0601: RFLAVGEDNQ IKFWNMDNTN LLTVVEAEGG LPNLPRLRFN KDGNLLAVTT ADNGFKILAN TDGLRTLRAF EARSFEASKA SIDMKVSTSA MASSISPAIG
0701: KIEHMDAGSP ARPTPIPNGI EAMSRTMEKP RNLDSVDKSK PLELTEIVDP TQCRQVTMPD SKDSVSKVAR LLYTNSGVGV LALGSNGVQR LWKWIRNEQN
0801: PTGKATASVT PQHWQPNSGL LMANDVPENP EGSVPCIALS KNDSYVMSAC GGKVSLFNMM TFKVMTTFMP PPPASTFLAF HPQDNNIIAI GMEDSSIHIY
0901: NVRVDEVKTK LKGHQKHITG LAFSTALNIL VSSGADAQLF FWTADSWEKK KSSAIQLPPG KAPVGDTRVQ FHNDQIQLLV SHETQLAIYD ASKMECIHKW
1001: VPQEALSSPI TSASYSCNSQ LVYASFADGN IAVFDAESLR LRCRIAPSAY MPQPTPNSAP IFPQVITAHP QEPNQLAVGL SDGSVKVIEP SELSRRWGVG
1101: VAAGSDKAGT ENGRPSSSSA ANNSSSDQIQ R
Arabidopsis Description
TPR2Topless-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.