Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009930.1-P | Field mustard | cytosol | 96.03 | 98.7 |
| CDX80607 | Canola | cytosol | 96.12 | 95.43 |
| CDY05552 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 89.9 | 89.74 |
| CDY25010 | Canola | cytosol | 89.72 | 89.48 |
| AT5G27030.2 | Thale cress | cytosol, endoplasmic reticulum | 88.55 | 86.6 |
| KRH33863 | Soybean | cytosol | 20.83 | 84.0 |
| KRG92932 | Soybean | nucleus | 77.28 | 75.84 |
| VIT_14s0060g01680.t01 | Wine grape | cytosol | 77.37 | 75.8 |
| KRG96753 | Soybean | endoplasmic reticulum | 76.47 | 75.04 |
| KRH68470 | Soybean | nucleus | 76.38 | 74.96 |
| Solyc01g100050.2.1 | Tomato | nucleus | 76.01 | 74.47 |
| PGSC0003DMT400063603 | Potato | cytosol | 75.74 | 74.2 |
| KRH33861 | Soybean | cytosol | 55.37 | 72.92 |
| CDY67912 | Canola | cytosol | 37.24 | 69.53 |
| Os01t0254100-01 | Rice | nucleus | 69.97 | 68.73 |
| KXG32191 | Sorghum | cytosol | 69.7 | 68.71 |
| Zm00001d040279_P012 | Maize | cytosol | 69.52 | 68.53 |
| TraesCS3D01G179800.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.25 | 67.61 |
| TraesCS3B01G204200.3 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.07 | 67.43 |
| TraesCS3A01G173300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 68.98 | 67.34 |
| CDX95900 | Canola | cytosol | 68.62 | 66.99 |
| CDX92100 | Canola | cytosol | 68.35 | 66.96 |
| GSMUA_Achr11P... | Banana | cytosol | 67.27 | 65.73 |
| GSMUA_Achr2P00320_001 | Banana | cytosol | 69.34 | 64.46 |
| CDY50500 | Canola | cytosol | 28.67 | 62.97 |
| CDY53312 | Canola | cytosol | 60.14 | 60.86 |
| CDY36584 | Canola | cytosol | 61.14 | 60.64 |
| CDX79383 | Canola | cytosol | 61.23 | 60.62 |
| CDX67950 | Canola | cytosol | 61.41 | 60.59 |
| CDY04683 | Canola | mitochondrion | 6.76 | 60.48 |
| CDY33387 | Canola | cytosol | 60.96 | 60.47 |
| CDX81729 | Canola | cytosol | 60.69 | 60.25 |
| CDY50502 | Canola | cytosol, plastid | 68.62 | 59.83 |
| CDY20161 | Canola | cytosol | 60.32 | 59.05 |
| CDY21881 | Canola | cytosol | 60.32 | 59.05 |
| CDX75851 | Canola | cytosol | 60.14 | 58.87 |
| CDX82426 | Canola | cytosol | 60.05 | 58.78 |
| KRH30800 | Soybean | mitochondrion | 16.86 | 57.36 |
| Zm00001d008338_P001 | Maize | cytosol | 57.26 | 45.65 |
| CDX79301 | Canola | cytosol | 6.67 | 34.1 |
| CDY38509 | Canola | cytosol | 20.11 | 29.11 |
| CDX83225 | Canola | cytosol | 19.48 | 28.88 |
| CDY12727 | Canola | golgi | 8.93 | 28.53 |
Protein Annotations
| MapMan:11.2.2.2 | MapMan:15.5.53.1 | Gene3D:2.130.10.10 | GO:A0A078DH17 | EnsemblPlants:CDX88252 | ProteinID:CDX88252 |
| ProteinID:CDX88252.1 | InterPro:CTLH_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00147738001 |
| InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR006595 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PFscan:PS50896 | PFscan:PS50897 |
| PANTHER:PTHR44083 | PANTHER:PTHR44083:SF3 | InterPro:Quino_amine_DH_bsu | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SMART:SM00667 |
| SMART:SM00668 | SUPFAM:SSF50969 | SUPFAM:SSF50998 | InterPro:Topless_fam | UniParc:UPI0004EF410B | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | SEG:seg | : | : |
Description
BnaA06g28430D
Coordinates
chrLK031854:-:1678336..1684880
Molecular Weight (calculated)
122081.0 Da
IEP (calculated)
7.071
GRAVY (calculated)
-0.197
Length
1109 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLSRELVF LILQFLDEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DEVEKYLSGF TKLDDNRYSM KIFFEIRKQK YLEALDKQDK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LHNFRENEQL SKYGDTKTAR TIMLGELKKL IEANPLFRDK LTFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAVPNGP LAPSQLNQPI TTLTKPTAFP SLGAHAPFPP GAAVAAAANA GALASWMAAA ASGASTVQAA AVTPASIPMP QNQVSILKRP PATPGVVDYQ
0301: NPEHELMKRL RPAPSVEEVT YPAPRQHAPP VSLEDLPLKA ALALHQGSTV TSMEFHPMQN TLLLVGSATG EIALWELAAR EKLVSRPFKI WDMANCSPPL
0401: QALIAKETPM SVIRVAWSPD GNFIGVAYAK HLIHLYAFSG PNELRQHAEV DAHVGAVNDL AFANPNRQLC VVTCGDDQLI KVWDVSGRKH FTFEGHEAPV
0501: YSICPHHKEN IQFIFSTAID GKIKAWLYDN MGSRVDYDAP GKWCTTMLYS ADGTRLFSCG TSKDGDVFLV EWNESEGSIK RTYLGFQKKL AGMVQFDTSK
0601: NHFLAVGEDA QIKFWDMDNI NVLTSTDAEG GLPALPRLRF NREGNLLAVT TADNGFKILA NQAGFRSLRA METSAFERMR TPADSSLTKA AVPGAPVASV
0701: SCKVELGSPV RPSPMLNGVD PPKPRVDDLA DNPRPWQLAE ILDPAQCRQA TLPDTGSSTK VVRLLYTNSG AGILALGFNG IQRLWKWVRN EQNPSGKATA
0801: AAVPQHWQPN SGLLMTNDVS GVNLEEANPC IALSKNDSYV MSAAGGKVSL FNMMTFKVMT TFMPPPPPSS FLAFHPQDNN IIAVGMEDST IHIYNVRVDE
0901: VKSKLKGHLK RITGLAFSTT LSILVSSAAD ALICFWSIDT WEKRKSVVIP MPAGKVAVGD TRVQFHVDQI RILAVHETQL AILDASKMEC IRQWIPQDSL
1001: SSHITSAVYA CNSQLIYATF RDGNIGVFDA DTLGLRCRIS PSAYLPQVNQ GLSPLVVAAH PQEPNQFAVG LNDGSVKVIE PTEAEGKWGM VPPSEAINTS
1101: PSTTSNQTP
0101: LRVFSTFNEE LYKEITQLLT LHNFRENEQL SKYGDTKTAR TIMLGELKKL IEANPLFRDK LTFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCAVPNGP LAPSQLNQPI TTLTKPTAFP SLGAHAPFPP GAAVAAAANA GALASWMAAA ASGASTVQAA AVTPASIPMP QNQVSILKRP PATPGVVDYQ
0301: NPEHELMKRL RPAPSVEEVT YPAPRQHAPP VSLEDLPLKA ALALHQGSTV TSMEFHPMQN TLLLVGSATG EIALWELAAR EKLVSRPFKI WDMANCSPPL
0401: QALIAKETPM SVIRVAWSPD GNFIGVAYAK HLIHLYAFSG PNELRQHAEV DAHVGAVNDL AFANPNRQLC VVTCGDDQLI KVWDVSGRKH FTFEGHEAPV
0501: YSICPHHKEN IQFIFSTAID GKIKAWLYDN MGSRVDYDAP GKWCTTMLYS ADGTRLFSCG TSKDGDVFLV EWNESEGSIK RTYLGFQKKL AGMVQFDTSK
0601: NHFLAVGEDA QIKFWDMDNI NVLTSTDAEG GLPALPRLRF NREGNLLAVT TADNGFKILA NQAGFRSLRA METSAFERMR TPADSSLTKA AVPGAPVASV
0701: SCKVELGSPV RPSPMLNGVD PPKPRVDDLA DNPRPWQLAE ILDPAQCRQA TLPDTGSSTK VVRLLYTNSG AGILALGFNG IQRLWKWVRN EQNPSGKATA
0801: AAVPQHWQPN SGLLMTNDVS GVNLEEANPC IALSKNDSYV MSAAGGKVSL FNMMTFKVMT TFMPPPPPSS FLAFHPQDNN IIAVGMEDST IHIYNVRVDE
0901: VKSKLKGHLK RITGLAFSTT LSILVSSAAD ALICFWSIDT WEKRKSVVIP MPAGKVAVGD TRVQFHVDQI RILAVHETQL AILDASKMEC IRQWIPQDSL
1001: SSHITSAVYA CNSQLIYATF RDGNIGVFDA DTLGLRCRIS PSAYLPQVNQ GLSPLVVAAH PQEPNQFAVG LNDGSVKVIE PTEAEGKWGM VPPSEAINTS
1101: PSTTSNQTP
0001: MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
0101: LRVFSTFNEE LYKEITQLLT LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN WQHQLCKNPR PNPDIKTLFT
0201: DHTCTLPNGP LAPSAVNQPV TTLTKPAAYP SLGPHVPFPP GPAAANAGAL ASWMAAASGA SAVQAAVVTP ALMPQPQNQM SILKRPRTPP ATPGIVDYQN
0301: PDHELMKRLR PAPSVEEVTY PAPRQQAPWS LEDLPTKAAL ALHQGSTVTS MEFYPMQNTL LLVGSATGEI TLWELAARER LVSRPFKIWD MSNCSHQFQA
0401: LIAKETPISV TRVAWSPDGN FIGVAFTKHL IQLYAFSGPN DLRQHTEIDA HVGAVNDLAF ANPNRQLCVI TCGDDKLIKV WDVSGRKHFT FEGHDAPVYS
0501: ICPHYKENIQ FIFSTAIDGK IKAWLYDNLG SRVDYDAPGK WCTRMLYSAD GTRLFSCGTS KDGDSFLVEW NESEGSIKRT YKEFQKKLAG VVQFDTSKNH
0601: FLAVGEDGQI KFWDMNNINV LTSTDAEGGL PALPHLRFNK DGNLLAVTTA DNGFKILANP AGFRSLRAME TPASETMRTP VDFKAVPGAP VASVNCKVER
0701: GSPVRHSQML NGVDPSKSRI DDSTDKPKSW QLAEILDPSQ CFQATLPDTA GSSTKVVQLL YTNSGAGILA LGSNGIQRLW KWVPNEQNPS GKATATVVPQ
0801: HWQPNSGLLM TNDVSGVNLE NAAPCIALSK NDSYVMSAAG GKVSLFNMMT FKVMTTFMPP PPASTFLAFH PQDNNVIAIG MEDSTIHIYN VRVDEVKSKL
0901: KGHQKRITGL AFSTALNILV SSGADAQICF WSIDTWEKRK SVAIQMPAGK AANGDTRVQF HVDQLRILVV HETQLAVFDA SKMECIRQWI PQDSLSAPIS
1001: SAVYACNSQL IYTTFRDGNI GVFDADSLRL RCRISPSAYL PQGNQGLSPL VVAAHPQDPN QFAVGLNDGS VKMMEPTEGE GKWGMIPPSE AINSPSTTSN
1101: QTPEQLQR
Arabidopsis Description
TPR3TOPLESS-related 3 [Source:UniProtKB/TrEMBL;Acc:F4K2T3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.