Factsheet for Bra002360.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92406	Canola	nucleus	96.13	98.89
Bra002361.1-P	Field mustard	nucleus	81.61	83.31
Bra020152.1-P	Field mustard	nucleus	76.77	78.81
AT5G21150.1	Thale cress	nucleus	70.65	73.33
Bra034318.1-P	Field mustard	nucleus	60.97	61.5
GSMUA_Achr9P05150_001	Banana	nucleus	59.46	60.44
Os01t0275600-01	Rice	nucleus	58.6	60.29
Zm00001d040429_P012	Maize	nucleus	57.96	59.82
Zm00001d008249_P012	Maize	nucleus	57.74	59.67
Os04t0151800-02	Rice	nucleus	58.39	59.6
OQU86696	Sorghum	nucleus	57.53	59.44
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	13.76	59.26
TraesCS3A01G188400.1	Wheat	nucleus	58.28	59.17
HORVU3Hr1G038830.1	Barley	nucleus	58.17	58.68
TraesCS7D01G458800.1	Wheat	nucleus	29.25	58.37
EES18816	Sorghum	nucleus	56.34	57.65
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	58.28	57.42
TraesCS1D01G453600.1	Wheat	nucleus	56.88	57.38
PGSC0003DMT400039204	Potato	cytosol	9.25	57.33
TraesCS1A01G445500.1	Wheat	golgi, unclear	56.99	57.3
TraesCS1B01G480100.1	Wheat	nucleus	57.1	57.28
TraesCS7A01G533100.1	Wheat	cytosol	55.38	57.16
Zm00001d039214_P025	Maize	nucleus	56.24	56.6
TraesCS7D01G520400.1	Wheat	nucleus	53.87	55.12
TraesCS7B01G450300.1	Wheat	nucleus	53.55	54.19
TraesCS3D01G191600.5	Wheat	nucleus	58.17	53.99
Bra022918.1-P	Field mustard	nucleus	49.78	53.4
TraesCS7B01G450200.2	Wheat	nucleus	52.69	52.92
TraesCS7A01G521000.1	Wheat	nucleus	46.13	52.9
TraesCS7B01G437900.1	Wheat	cytosol	45.48	52.42
TraesCS7B01G437700.1	Wheat	nucleus	48.39	51.19
EES00570	Sorghum	nucleus	48.82	50.56
Os01t0275200-00	Rice	golgi, peroxisome, plastid	24.52	48.82
TraesCS7B01G373400.1	Wheat	nucleus	40.11	47.46
Solyc03g111760.2.1	Tomato	mitochondrion	43.12	43.78
TraesCS7D01G458900.1	Wheat	mitochondrion	8.06	41.21
HORVU7Hr1G107770.1	Barley	nucleus	26.45	41.14
Bra002349.1-P	Field mustard	nucleus	67.96	37.15
Bra011993.1-P	Field mustard	plastid	32.47	31.26
Bra033698.1-P	Field mustard	plastid	32.47	31.01
Bra014136.1-P	Field mustard	nucleus	33.87	29.19
Bra032254.1-P	Field mustard	nucleus	34.09	28.53
Bra003999.1-P	Field mustard	nucleus	27.31	25.89
Bra040815.1-P	Field mustard	cytosol	26.45	24.38
Bra023172.1-P	Field mustard	nucleus	26.56	23.82

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N
EnsemblPlantsGene:Bra002360	EnsemblPlants:Bra002360.1	EnsemblPlants:Bra002360.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047
InterPro:IPR003100	InterPro:IPR003165	UniProt:M4CDS9	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF20	InterPro:Piwi	InterPro:RNaseH-like_sf	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000254486E	SEG:seg	:	:

Description

AT5G21150 (E=6e-268) | PAZ domain-containing protein / piwi domain-containing protein

Coordinates

chrA10:-:10082198..10086827

Molecular Weight (calculated)

105380.0 Da

IEP (calculated)

9.449

GRAVY (calculated)

-0.361

Length

930 amino acids

Sequence
(BLAST)

001: MDSHEAKRLP PPPPVVPPNL VPEREPIKKT TLLPMARRGI GSEGVRTPLL TNHFRVNFNN ANGHFYHYSV TITYEDGSPM EAIGVFRKIL EKVQETYRTD
101: LGSKYFAYDG HKNLFTIGAL PSNKMDFLVV LENTPSSRNN TGNASPNDAD RKRSRLPHRS KKFMVEISYA ARIPMQAIAS AIRGKETDNI QDATRVLDVI
201: LHQNAARQGC LLVRQSFFHN DARNYINIGG GVFGARGFHT SFRTTQRGLS LNIDTSTTMV VQPGPVIDFL LANQNVNDPK YLDWNNARRA LKNLRVKVVP
301: SNRECKITGL SEERCKYQMF TMNSKNEKGD VQITVYNYFT EIRGLKLRYS GDFPCINVGK ANRPNYIPIE HCELVSLQRY TKSLSSFQKA SLVENSRQSP
401: PERMASLTNS MKKSNYNADL VLQESGVSIG SSFIQVEGRV LPAPRLRIGN GEEFQPRNGR WNFNKKKLVE PVTVTRWVVV NFSAECDTDR IISDLIRCGQ
501: MKGMNVEPPY KVVFQEDPNY RGAPANIRVE KMFEQIQSEL RKEGKPKFIL CILAEKKNSL VYGPWKKKNL IEHGIVTQCI APPKNVKDQY ITNVLLKINA
601: KLGGLNSLLA MERSRAMMHL VTQVPTFIVG MDVSHGSPNQ ADIPSIAAVV GSREWPLISK YRACVRTQSR KMEMIDNLFK LVPNEKGKLV DEGIFWFDYS
701: RVVFIACGSG FCHINEKLYA LFRELLFDFY TSSGKRRPEH IIIFRDGVSD SQFNQVLNIE LDQIMQACKF VEENWEPKFT VIIAQKNHHT KFFQDRGTEN
801: VLPGTIVDSR ICHPHNNDFY LCAHAGLIGT TRPTHYHVLY DEIRFSTDDL QELVHSLSYV YQRSTTAISV VAPICYAHLA AAQMGTVMKF EDMSLSERSS
901: IHDGITRSGE PPVPPMPMLN SDVASSMFFC

Best Arabidopsis Sequence Match ( AT5G21150.1 )
(BLAST)

001: MDSDEPNGSG LPPPPPFVPA NLVPEVEPVK KNILLPMARP RGSGSKGQKI PLLTNHFGVK FNKPSGYFFH YSVAINYEDG RPVEAKGIGR KILDKVQETY
101: QSDLGAKYFA YDGEKTLFTV GALPSNKLDF SVVLEEIPSS RNHAGNDTND ADRKRSRRPN QTKKFMVEIS YAAKIPMQAI ASALQGKETE NLQDALRVLD
201: IILRQSAARQ GCLLVRQSFF HNDVKNFVPI GGGVSGCRGF HSSFRTTQGG LSLNIDTSTT MIVQPGPVVD FLLANQNKKD PYGMDWNKAR RVLKNLRVQI
301: TLSNREYKIS GLSEHSCKDQ LFTWRKPNDK GEFEEVEITV LNYYKERNIE VRYSGDFPCI NVGKPKRPTY FPIEFCNLVS LQRYTKSLTN FQRAALVEKS
401: RQKPPERMAS LTKGLKDSNY NADPVLQDSG VSIITNFTQV EGRILPTPML KVGKGENLSP IKGKWNFMRK TLAEPTTVTR WAVVNFSARC DTNTLIRDLI
501: KCGREKGINV EPPFKDVINE NPQFRNAPAT VRVENMFEQI KSKLPKPPLF LLCILAERKN SDVYGPWKKK NLVDLGIVTQ CIAPTRLNDQ YLTNVLLKIN
601: AKLGGLNSLL AMERSPAMPK VTQVPTIIVG MDVSHGSPGQ SDIPSIAAVV SSRQWPLISK YKACVRTQSR KMEMIDNLFK PVNGKDEGMF RELLLDFYYS
701: SENRKPEHII IFRDGVSESQ FNQVLNIELD QMMQACKFLD DTWHPKFTVI VAQKNHHTKF FQSRGPDNVP PGTIIDSQIC HPRNFDFYLC AHAGMIGTTR
801: PTHYHVLYDE IGFATDDLQE LVHSLSYVYQ RSTTAISVVA PVCYAHLAAA QMGTVMKYEE LSETSSSHGG ITTPGAVPVP PMPQLHNNVS TSMFFC

Arabidopsis Description

AGO9Protein argonaute 9 [Source:UniProtKB/Swiss-Prot;Acc:Q84VQ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.