Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d010719_P002 | |
| Zm00001d038644_P004 | |
| Zm00001d053872_P021 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27040.1 | Zm00001d053872_P021 | AT2G40030.1 | 19410546 |
| AT2G27040.1 | Zm00001d010719_P002 | AT5G04290.1 | 19410546 |
| AT2G27040.1 | Zm00001d038644_P004 | AT5G04290.1 | 19410546 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18816 | Sorghum | nucleus | 94.16 | 95.71 |
| Os04t0151800-02 | Rice | nucleus | 83.01 | 84.19 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 76.84 | 76.59 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 76.3 | 76.46 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 76.52 | 76.43 |
| Zm00001d040429_P012 | Maize | nucleus | 73.7 | 75.58 |
| Zm00001d008249_P012 | Maize | nucleus | 72.94 | 74.89 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 71.54 | 73.36 |
| PGSC0003DMT400070806 | Potato | nucleus | 23.16 | 73.29 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 70.78 | 71.95 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 70.78 | 71.16 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 70.35 | 71.04 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 69.05 | 68.9 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 67.86 | 68.67 |
| PGSC0003DMT400069459 | Potato | nucleus | 67.42 | 68.24 |
| Solyc06g073540.2.1 | Tomato | nucleus | 67.1 | 67.91 |
| Solyc01g008960.2.1 | Tomato | nucleus | 66.23 | 67.33 |
| PGSC0003DMT400058471 | Potato | nucleus | 65.69 | 66.78 |
| KRH14678 | Soybean | nucleus | 65.15 | 66.45 |
| KRH73469 | Soybean | nucleus | 64.5 | 65.78 |
| CDY72062 | Canola | plastid | 21.1 | 65.66 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 65.04 | 65.47 |
| Solyc01g096750.1.1 | Tomato | nucleus | 61.36 | 64.36 |
| KRG89867 | Soybean | nucleus | 65.58 | 63.99 |
| Solyc06g073530.1.1 | Tomato | nucleus | 62.34 | 63.72 |
| CDY56413 | Canola | nucleus | 63.31 | 63.38 |
| CDY04475 | Canola | nucleus | 63.31 | 63.38 |
| CDX77061 | Canola | nucleus | 62.77 | 62.91 |
| CDY48192 | Canola | nucleus | 62.66 | 62.8 |
| AT2G27040.1 | Thale cress | nucleus | 62.77 | 62.77 |
| Bra034318.1-P | Field mustard | nucleus | 62.55 | 62.69 |
| AT5G21150.1 | Thale cress | nucleus | 60.61 | 62.5 |
| Bra020152.1-P | Field mustard | nucleus | 60.71 | 61.92 |
| CDY09103 | Canola | nucleus | 60.61 | 61.81 |
| PGSC0003DMT400039204 | Potato | cytosol | 9.96 | 61.33 |
| Bra002361.1-P | Field mustard | nucleus | 59.09 | 59.93 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 56.93 | 59.44 |
| CDX92417 | Canola | nucleus | 41.34 | 59.32 |
| CDX92405 | Canola | nucleus | 58.66 | 59.23 |
| CDX92406 | Canola | nucleus | 56.82 | 58.08 |
| AT5G21030.2 | Thale cress | cytosol | 53.46 | 57.85 |
| CDY59516 | Canola | nucleus | 56.49 | 57.62 |
| CDY16587 | Canola | nucleus | 54.65 | 57.26 |
| Bra002360.1-P | Field mustard | nucleus | 56.6 | 56.24 |
| Zm00001d019905_P003 | Maize | nucleus | 54.55 | 54.72 |
| KRH56276 | Soybean | cytosol | 47.62 | 52.95 |
| CDY16595 | Canola | nucleus | 51.73 | 51.96 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 46.65 | 47.05 |
| Zm00001d015926_P001 | Maize | nucleus | 10.71 | 44.0 |
| CDY62055 | Canola | nucleus | 26.41 | 42.36 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 9.85 | 39.39 |
| Zm00001d026146_P001 | Maize | nucleus | 6.06 | 38.36 |
| Zm00001d025691_P001 | Maize | mitochondrion | 7.36 | 34.87 |
| Zm00001d018436_P001 | Maize | cytosol | 4.55 | 34.43 |
| Zm00001d032611_P002 | Maize | vacuole | 13.74 | 34.14 |
| Zm00001d025073_P001 | Maize | cytosol | 14.18 | 33.76 |
| Zm00001d044183_P001 | Maize | cytosol | 6.49 | 33.15 |
| Zm00001d036917_P009 | Maize | nucleus | 34.63 | 33.13 |
| Zm00001d025331_P002 | Maize | cytosol | 19.37 | 32.43 |
| Zm00001d046438_P003 | Maize | cytosol | 34.63 | 31.84 |
| Zm00001d037833_P001 | Maize | mitochondrion | 8.44 | 31.45 |
| Zm00001d036886_P001 | Maize | plastid | 7.47 | 30.53 |
| Zm00001d009158_P003 | Maize | golgi | 14.39 | 30.43 |
| Zm00001d021345_P001 | Maize | nucleus | 29.55 | 29.39 |
| Bra002349.1-P | Field mustard | nucleus | 53.57 | 29.1 |
| Zm00001d002650_P003 | Maize | nucleus | 35.28 | 28.95 |
| Zm00001d026111_P014 | Maize | nucleus | 34.31 | 28.95 |
| Zm00001d026300_P001 | Maize | nucleus | 27.49 | 28.83 |
| Zm00001d013542_P003 | Maize | nucleus | 32.9 | 28.82 |
| Zm00001d011096_P059 | Maize | nucleus | 34.42 | 28.7 |
| Zm00001d002316_P003 | Maize | plastid | 26.41 | 28.5 |
| Zm00001d007786_P001 | Maize | nucleus | 31.82 | 28.49 |
| Zm00001d014875_P001 | Maize | nucleus | 32.9 | 28.17 |
| Zm00001d013063_P001 | Maize | nucleus | 30.52 | 27.92 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 34.42 | 27.68 |
| Zm00001d006351_P001 | Maize | nucleus | 31.28 | 27.45 |
| Zm00001d039440_P001 | Maize | cytosol | 6.93 | 26.23 |
| Zm00001d033206_P001 | Maize | cytosol | 27.38 | 26.19 |
| Zm00001d029573_P001 | Maize | cytosol | 28.25 | 25.29 |
| Zm00001d033518_P001 | Maize | nucleus | 32.14 | 25.02 |
| Zm00001d035554_P001 | Maize | plastid | 12.23 | 22.47 |
Protein Annotations
| EntrezGene:100383316 | MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A1D6MEK7 |
| ProteinID:AQK89068.1 | InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF56 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000842896A |
| EnsemblPlantsGene:Zm00001d039214 | EnsemblPlants:Zm00001d039214_P025 | EnsemblPlants:Zm00001d039214_T025 | SEG:seg | : | : |
Description
argonaute104 argonaute104
Coordinates
chr6:-:172672212..172679202
Molecular Weight (calculated)
103243.0 Da
IEP (calculated)
8.653
GRAVY (calculated)
-0.369
Length
924 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLLHGRCCL FYLEMGSHDG EDEELPPPPP VPPDVIPIKA EDAVGESPAN HILKPKRLLM DRPGIGRKGQ PTQLYSNHFK VAVKSTEDVF FHYYVNLKYE
101: DDRPVDGKGI GRKVIDKLQQ TYRAELSNKD FAYDGEKSLF TVGGLPQKKN EFTVVLEDVS TGKTAANGSP GGNDSPGGGD RKRVRRPYQT KTFKVEINFA
201: AEVPMSAIGQ VIRGEESENS LEALRVLDII LRQHSAEQGC LLVKQSFFYN NPSCFVDLGG GVMGCRGFHS SFRGTQSGLS LNVDVSTTMI VKPGPVIDFL
301: LSNQNVNDPS RIDWQKAKRA LKGLRIRTTP ANSEFKIFGL SERICKEQTF PLRQRNGSNG DCDTIEITVY DYYAKKGIDL KYSGDFPCIN TGKAKRPTYF
401: PIELCSLVPL QRYTKALSTL QRSSLVEKSR QKPEERMTVL NDALQRSNYD SDPMLRACGV SVAPKFTQVE GRILQAPKLK AGNGDDIFSR NGRWNFTNRK
501: FYETCSVNKW AVVNFSARCD VRNLIRDLMR NASAKGIQME EPFDVFEESP SMRRAPVSRR VDDMFGQIKS KLPGAPRFLL CLLPERKNCE IYGPWKRKCL
601: AEFGIVTQCL APLRVNDPYL LNLLMKINAK LGGLNSLLQV EASSSIPHVS QVPTIILGMD VSHGHPGQDR PSVAAVVSSR QWPLISRYRA SVHTQSARLE
701: MMSSLFKPRG TDDDGLIRES LIDFYTSSGK RKPEHIIIFR DGVSESQFTQ VINIELDQII EACKFLDEKW SPKFTVIVAQ KNHHTKFFQT ASPDNVLPGT
801: VVDSKVCHPK NFDFYMCAHA GMIGTTRPTH YHVLHDEIGF SADEMQEFVH SLSYVYQRST TAISVVAPVC YAHLAAAQVS TFLRLEEMSD ASSSQGGGHT
901: SAGSAPVPEL PRLHDKVRSS MFFC
101: DDRPVDGKGI GRKVIDKLQQ TYRAELSNKD FAYDGEKSLF TVGGLPQKKN EFTVVLEDVS TGKTAANGSP GGNDSPGGGD RKRVRRPYQT KTFKVEINFA
201: AEVPMSAIGQ VIRGEESENS LEALRVLDII LRQHSAEQGC LLVKQSFFYN NPSCFVDLGG GVMGCRGFHS SFRGTQSGLS LNVDVSTTMI VKPGPVIDFL
301: LSNQNVNDPS RIDWQKAKRA LKGLRIRTTP ANSEFKIFGL SERICKEQTF PLRQRNGSNG DCDTIEITVY DYYAKKGIDL KYSGDFPCIN TGKAKRPTYF
401: PIELCSLVPL QRYTKALSTL QRSSLVEKSR QKPEERMTVL NDALQRSNYD SDPMLRACGV SVAPKFTQVE GRILQAPKLK AGNGDDIFSR NGRWNFTNRK
501: FYETCSVNKW AVVNFSARCD VRNLIRDLMR NASAKGIQME EPFDVFEESP SMRRAPVSRR VDDMFGQIKS KLPGAPRFLL CLLPERKNCE IYGPWKRKCL
601: AEFGIVTQCL APLRVNDPYL LNLLMKINAK LGGLNSLLQV EASSSIPHVS QVPTIILGMD VSHGHPGQDR PSVAAVVSSR QWPLISRYRA SVHTQSARLE
701: MMSSLFKPRG TDDDGLIRES LIDFYTSSGK RKPEHIIIFR DGVSESQFTQ VINIELDQII EACKFLDEKW SPKFTVIVAQ KNHHTKFFQT ASPDNVLPGT
801: VVDSKVCHPK NFDFYMCAHA GMIGTTRPTH YHVLHDEIGF SADEMQEFVH SLSYVYQRST TAISVVAPVC YAHLAAAQVS TFLRLEEMSD ASSSQGGGHT
901: SAGSAPVPEL PRLHDKVRSS MFFC
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Arabidopsis Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.