Factsheet for Zm00001d039440_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018436_P001	Maize	cytosol	25.0	50.0
Zm00001d036886_P001	Maize	plastid	34.02	36.73
Zm00001d035554_P001	Maize	plastid	74.59	36.18
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	29.92	31.6
Zm00001d026146_P001	Maize	nucleus	17.21	28.77
Zm00001d015926_P001	Maize	nucleus	25.0	27.11
Zm00001d032611_P002	Maize	vacuole	32.79	21.51
Zm00001d025073_P001	Maize	cytosol	27.87	17.53
Zm00001d009158_P003	Maize	golgi	30.74	17.16
Zm00001d025331_P002	Maize	cytosol	34.43	15.22
Zm00001d025691_P001	Maize	mitochondrion	11.48	14.36
TraesCS5A01G446000.1	Wheat	cytosol	39.75	11.43
TraesCS5D01G454600.1	Wheat	cytosol	31.15	10.26
TraesCS3B01G287600.1	Wheat	nucleus	36.89	9.93
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	34.43	9.87
Zm00001d013063_P001	Maize	nucleus	40.16	9.7
CDX71410	Canola	nucleus	37.3	9.56
CDY04517	Canola	plastid	36.89	9.4
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	40.57	9.4
Os03t0800200-01	Rice	plasma membrane	40.57	9.36
TraesCS5B01G451400.2	Wheat	plastid	40.57	9.34
Bra011993.1-P	Field mustard	plastid	36.89	9.32
KRH25139	Soybean	plastid	35.66	9.05
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	36.48	9.04
Zm00001d036917_P009	Maize	nucleus	35.66	9.01
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	36.48	8.93
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	37.7	8.91
TraesCS5B01G458100.1	Wheat	cytosol	33.61	8.63
Zm00001d007786_P001	Maize	nucleus	36.48	8.62
Zm00001d046438_P003	Maize	cytosol	35.25	8.56
TraesCS5B01G452500.1	Wheat	nucleus	31.97	8.55
Zm00001d013542_P003	Maize	nucleus	36.89	8.53
KRH30536	Soybean	plastid	30.74	8.43
Zm00001d026111_P014	Maize	nucleus	36.89	8.22
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	34.43	8.2
Zm00001d021345_P001	Maize	nucleus	31.15	8.18
Zm00001d011096_P059	Maize	nucleus	36.89	8.12
Zm00001d002650_P003	Maize	nucleus	37.3	8.08
Solyc06g074730.2.1	Tomato	nucleus	32.79	7.91
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	36.89	7.83
Zm00001d014875_P001	Maize	nucleus	33.61	7.6
Zm00001d006351_P001	Maize	nucleus	31.97	7.41
Zm00001d033518_P001	Maize	nucleus	35.66	7.33
Zm00001d008249_P012	Maize	nucleus	26.23	7.11
Zm00001d040429_P012	Maize	nucleus	26.23	7.1
Zm00001d002316_P003	Maize	plastid	24.59	7.01
Zm00001d039214_P025	Maize	nucleus	26.23	6.93
Zm00001d026300_P001	Maize	nucleus	25.0	6.92
Zm00001d033206_P001	Maize	cytosol	26.23	6.63
Zm00001d019905_P003	Maize	nucleus	25.0	6.62
Zm00001d029573_P001	Maize	cytosol	25.82	6.1
TraesCS5D01G192700.2	Wheat	nucleus	17.62	4.56
TraesCS5B01G454200.1	Wheat	cytosol	9.02	3.26
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	5.74	3.06
Zm00001d037833_P001	Maize	mitochondrion	2.46	2.42
Zm00001d044183_P001	Maize	cytosol	1.23	1.66
Os03t0789500-01	Rice	cytosol	0.82	0.88

Protein Annotations

EnsemblPlants:Zm00001d039440_P001	EnsemblPlants:Zm00001d039440_T001	EnsemblPlantsGene:Zm00001d039440	Gene3D:3.30.420.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	PFAM:PF02171	PFscan:PS50822	ProteinID:ONM28857.1	SEG:seg
SUPFAM:SSF53098	UniParc:UPI000842A40E	UniProt:A0A1D6MHE0	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3:-:4464695..4470418

Molecular Weight (calculated)

28154.1 Da

IEP (calculated)

9.557

GRAVY (calculated)

-0.332

Length

244 amino acids

Sequence
(BLAST)

001: MFSFMKWMPS ERYDFQHQNL SAKYGLHCHA HVNGFVPFHF KACASLEEGY LPPLTFVVVQ KRHHTRLFPE VHGRHDMTDK SGNILPGTVV DQKICHPTEF
101: DFYLCSHVGI QGTSFQCLLY RSSARECYRR RLRTRTPPSR VLYKSGSIIV LSRTDFLRPD MLASLANYFG LGKQRRRSLD DVKMNIDVLK NCATVLFLDN
201: VDCPVTPLVG TPRWKFFTSK IMKSICDLDK TPGPGRQVKY DNLE

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.