Factsheet for Bra011993.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04517	Canola	plastid	98.55	99.48
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	77.43	75.03
Zm00001d015926_P001	Maize	nucleus	15.73	67.56
TraesCS4B01G026600.1	Wheat	cytosol	32.71	65.15
EER90726	Sorghum	cytosol	55.59	63.25
Zm00001d018436_P001	Maize	cytosol	7.97	63.11
TraesCS5A01G446000.1	Wheat	cytosol	54.76	62.31
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	14.49	60.61
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	64.39	60.27
TraesCS4A01G288300.1	Wheat	plastid	52.9	59.63
TraesCS4D01G024100.1	Wheat	plastid	52.69	59.39
TraesCS4D01G024300.1	Wheat	cytosol	33.64	59.09
Zm00001d032611_P002	Maize	vacuole	22.67	58.87
KRH25139	Soybean	plastid	58.49	58.79
OQU91198	Sorghum	nucleus	45.03	58.55
KRH30536	Soybean	plastid	53.73	58.31
OQU88608	Sorghum	plastid	53.11	58.23
TraesCS5B01G468000.1	Wheat	plastid	52.59	58.19
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	50.21	57.53
TraesCS5D01G454600.1	Wheat	cytosol	43.79	57.09
TraesCS3B01G287600.1	Wheat	nucleus	53.31	56.84
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	26.19	55.36
TraesCS5B01G454200.1	Wheat	cytosol	38.51	55.11
OQU91197	Sorghum	plastid	50.21	54.86
TraesCS4A01G288000.1	Wheat	cytosol	40.68	54.81
Os03t0800200-01	Rice	plasma membrane	59.01	53.88
TraesCS5B01G452500.1	Wheat	nucleus	50.31	53.29
TraesCS5B01G451400.2	Wheat	plastid	57.97	52.83
Zm00001d025691_P001	Maize	mitochondrion	10.66	52.82
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	57.56	52.8
Zm00001d009158_P003	Maize	golgi	23.81	52.63
Zm00001d036886_P001	Maize	plastid	12.22	52.21
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	53.21	52.18
Bra033698.1-P	Field mustard	plastid	52.59	52.16
Os03t0682600-00	Rice	nucleus	40.17	51.94
TraesCS2B01G195200.2	Wheat	nucleus	53.31	51.09
Solyc06g074730.2.1	Tomato	nucleus	53.42	51.04
TraesCS2D01G176500.1	Wheat	golgi, unclear	54.76	51.01
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	10.77	50.98
TraesCS2A01G168900.1	Wheat	cytosol	54.66	50.92
Bra014136.1-P	Field mustard	nucleus	56.83	50.88
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	53.52	50.44
Zm00001d013063_P001	Maize	nucleus	52.69	50.4
Bra032254.1-P	Field mustard	nucleus	56.94	49.51
Zm00001d013542_P003	Maize	nucleus	53.0	48.53
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	18.01	48.47
Zm00001d007786_P001	Maize	nucleus	51.66	48.35
Os07t0188000-01	Rice	nucleus	52.38	48.1
TraesCS4B01G024000.1	Wheat	nucleus	50.62	47.75
HORVU4Hr1G004030.1	Barley	mitochondrion	50.31	47.05
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	10.04	44.91
GSMUA_Achr6P04510_001	Banana	nucleus	55.49	43.33
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	23.6	43.26
TraesCS7A01G067500.2	Wheat	cytosol	37.27	42.15
Zm00001d033518_P001	Maize	nucleus	51.24	41.7
TraesCS5B01G458100.1	Wheat	cytosol	40.48	41.16
Zm00001d039440_P001	Maize	cytosol	9.32	36.89
Bra022918.1-P	Field mustard	nucleus	31.88	35.52
TraesCS5D01G192700.2	Wheat	nucleus	34.47	35.31
Bra034318.1-P	Field mustard	nucleus	33.02	34.6
Bra020152.1-P	Field mustard	nucleus	32.19	34.33
Os02t0616300-00	Rice	vacuole	11.7	34.14
Bra002361.1-P	Field mustard	nucleus	31.99	33.92
Bra003999.1-P	Field mustard	nucleus	33.95	33.44
Bra002360.1-P	Field mustard	nucleus	31.26	32.47
EER93271	Sorghum	cytosol	31.57	30.14
Zm00001d035554_P001	Maize	plastid	14.91	28.63
Bra040815.1-P	Field mustard	cytosol	29.5	28.25
Bra023172.1-P	Field mustard	nucleus	30.23	28.16
Bra002349.1-P	Field mustard	nucleus	29.92	16.99
Os03t0789500-01	Rice	cytosol	0.52	2.2

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:Bra011993	EnsemblPlants:Bra011993.1	EnsemblPlants:Bra011993.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009607	GO:GO:0009615	GO:GO:0009814	GO:GO:0009987	GO:GO:0031047	GO:GO:0040029
GO:GO:0060145	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M4D685	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF105	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI000254193B	SEG:seg	:	:	:

Description

AT2G27880 (E=0.0) AGO5 | AGO5 (ARGONAUTE 5); nucleic acid binding

Coordinates

chrA07:+:10695743..10700411

Molecular Weight (calculated)

107710.0 Da

IEP (calculated)

9.907

GRAVY (calculated)

-0.399

Length

966 amino acids

Sequence
(BLAST)

001: MSSRGGRGGG GGRRSDQSPG PVAWPALQSS GARGGRGRGN AAPVASSSSS PPSDAVSGAI GAVDVASSSS VREKPKASAS SDSDSSLGQE LAEKVQITTA
101: PPSSSKAVTF PVRPGFGQAG KKVTIRANHF LVQVADRDLY HYDVSISPEV ISKKVNRDVM TTLVKTYGES HMAKKIPAYD GRKSLYTAGP LPFESKEFVV
201: DLNDKKPAAS SKRDRKFRVA IKLASRPDLH QLQEFLRRKQ RDAPYETIQV LDVVLRDLPS QKFVSVGRSF FDPSLGRRGE LGDGVEYWSG YFQSLRLTQM
301: GLSLNIDVSA RSFYEPILVT EFIGKYLNLR DFSRPLRDSD RVKASYLMFI QPVKKALKSL KVELAQFDFA RSVKVSGISS CPISELRFTL EDNTQKTVVQ
401: YFAEKYNYRV KYPALPAIQS GSDSRPAYFP MELCRIAEGQ RYTKKLNERQ VTALLRATCQ RPDIRENSIK GMVKNNKYNE IDLVRKEFGM SVTDQLATVE
501: ARVLPPPLLK YHESGREKMV NPRLGQWNMI DKKMINGARV ASWTSVCFST RIDRNLPQEF CKQLIDMCVS KGMQFNPQPA IPFISCQPQR IEEALCDIHK
601: RAPGLQMLIV ILPDVTGSYG KIKRICETEL GIVSQCCQPN QVRKLNKQYM ENVALKINVK TGGRNTVLDD AIRRRIPLIS DRPTIIFGAD VTHPQPGEDS
701: SPSIAAVVAS MDWPEITKYR GLVSAQTHRE EIIEDLYKLV QDPQRGPVHT GMIREHLIAF RRATGQKPLR IIFYRDGVSE GQFSQVLLHE MTAIRKACAS
801: LEERYLPPVT FVVVQKRHHT RLFPAQHGNR ETTDKSGNIQ PGTVVDTKIC HPTEFDFYLN SHAGIQGTSR PAHYHVLVDE NGFTADALQM LTNNLCYTFA
901: RCTRSVSIVP PAYYAHLAAF RARYYMESEN SDGGSSRSRN TTASTSAVVS LLPATKDNVK DVMFYC

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.