Factsheet for Bra022918.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84712	Canola	nucleus	99.88	99.88
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	22.15	88.89
AT2G32940.1	Thale cress	nucleus	84.66	83.6
Os07t0265600-01	Rice	cytosol, nucleus	24.8	69.58
KXG23356	Sorghum	nucleus	62.86	61.86
VIT_12s0059g01430.t01	Wine grape	nucleus	65.28	61.52
KRH20672	Soybean	nucleus	63.78	60.57
TraesCS5D01G169500.1	Wheat	cytosol	61.48	60.43
TraesCS5A01G165900.1	Wheat	cytosol	61.36	60.25
HORVU0Hr1G012490.1	Barley	nucleus	61.25	60.14
Solyc07g049500.2.1	Tomato	nucleus	62.17	59.69
TraesCS5B01G162300.1	Wheat	mitochondrion	61.36	59.24
GSMUA_Achr9P22630_001	Banana	nucleus	60.78	58.82
Zm00001d019905_P003	Maize	nucleus	61.94	58.31
GSMUA_Achr9P27810_001	Banana	plastid	54.44	54.19
Bra020152.1-P	Field mustard	nucleus	55.94	53.53
Bra002361.1-P	Field mustard	nucleus	54.79	52.14
Bra034318.1-P	Field mustard	nucleus	55.02	51.74
Bra002360.1-P	Field mustard	nucleus	53.4	49.78
Bra033698.1-P	Field mustard	plastid	36.1	32.14
Bra011993.1-P	Field mustard	plastid	35.52	31.88
Bra014136.1-P	Field mustard	nucleus	37.02	29.75
Bra032254.1-P	Field mustard	nucleus	37.25	29.07
Bra002349.1-P	Field mustard	nucleus	52.71	26.87
Bra003999.1-P	Field mustard	nucleus	29.41	25.99
Bra040815.1-P	Field mustard	cytosol	28.37	24.38
Bra023172.1-P	Field mustard	nucleus	28.26	23.63

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	EnsemblPlantsGene:Bra022918	EnsemblPlants:Bra022918.1	EnsemblPlants:Bra022918.1-P	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0006342	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987
GO:GO:0016043	GO:GO:0030422	GO:GO:0031047	GO:GO:0035197	GO:GO:0040029	GO:GO:0051607
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M4E2B8	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF35	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000253FCC0	SEG:seg

Description

AT2G32940 (E=0.0) AGO6 | AGO6 (ARGONAUTE 6); nucleic acid binding

Coordinates

chrA03:+:7745478..7750139

Molecular Weight (calculated)

97222.1 Da

IEP (calculated)

9.116

GRAVY (calculated)

-0.303

Length

867 amino acids

Sequence
(BLAST)

001: MPVTPEEPSR RDYAVTARLG VGSTGRRIQL CTNHFNVSVG QPDVVFYQYT VSITTEDGEN VQGKGIGRKL IDQLYKTYSS DLDGKRLAFD GEKTLYTVGP
101: LPQNDFDFQV ILEASFSKRD CGVSDGGSPS GSSKRSKRSF LPRSYRVQIH FSAKIPLRSV LATQRGVDTS DNSTQDAVRV LDIVLRQQAA ERGCLLVRQA
201: FFLNDVNSVD VGGGVIGIRG FHSSFRPTDG GLSLNIDVST TMILKPGPVI EFLKANQNVE LPRQIDWIKA SKVLKNLRVK ASHRNMEFKI IGLSAKPCNQ
301: QLFTMKIKDG ECEGQTKEIT VYEYFKQTYT EPTYSAYLPC LDVGKPDRPN YLPLEFCNLV SLQRYTKALS VRQRALLVEK SRQKPLERIK ALNDAMHTYC
401: YDKDPFLAGS GISIEKQMTL AEGRVLNPPT LKFGKNEDFL PSNGRWNFNK KMLIEPRAIK NWAVVNFSFP CDSSHISREL ISCGMRKGIE IDRPFALVEE
501: EPQSKNLSAV KRVEKMIAKM KSKFPIDPPH FILCVLPERK NSDIYGPWKK VCLTEAGINT QCICPTKIND QYLTNVLLKI NSKLGGINSL LGMECSSNIP
601: LINKIPTLIL GMDVSHGSPG RADVPSIAAV VGSKNWPLIS RYRAAVRTQS PKMEMIDSLF QPVEDPVNGD NGIMNELFVE FFKTSNARKP KQIIIFRDGV
701: SESQFNQVLN IEVDQIIKAY QRLGETDVPK FTVIVAQKRH HTKLFQAKGH ENVPAGTVVD TKIVHPTNYD FYMCAHAGII GTSRPAHYHV LLDEIGFSPD
801: ELQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQFAQFT KFEDISEEKV PELPRLHERV ESNMFFC

Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Arabidopsis Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.