Factsheet for AT2G32940.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79495	Canola	nucleus	84.17	85.24
CDX84712	Canola	nucleus	83.71	84.78
Bra022918.1-P	Field mustard	nucleus	83.6	84.66
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	20.27	82.41
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	22.1	82.2
Os07t0265600-01	Rice	cytosol, nucleus	24.26	68.93
VIT_12s0059g01430.t01	Wine grape	nucleus	64.46	61.52
KXG23356	Sorghum	nucleus	60.71	60.5
Solyc07g049500.2.1	Tomato	nucleus	61.96	60.24
TraesCS5D01G169500.1	Wheat	cytosol	59.45	59.18
KRH20672	Soybean	nucleus	61.39	59.04
TraesCS5A01G165900.1	Wheat	cytosol	59.34	59.0
HORVU0Hr1G012490.1	Barley	nucleus	59.34	59.0
TraesCS5B01G162300.1	Wheat	mitochondrion	59.8	58.46
GSMUA_Achr9P22630_001	Banana	nucleus	58.77	57.59
Zm00001d019905_P003	Maize	nucleus	60.14	57.33
GSMUA_Achr9P27810_001	Banana	plastid	52.85	53.27
AT5G21150.1	Thale cress	nucleus	53.64	52.57
AT2G27040.1	Thale cress	nucleus	53.53	50.87
AT5G21030.2	Thale cress	cytosol	49.32	50.7
AT5G43810.3	Thale cress	nucleus	35.65	31.68
AT1G48410.2	Thale cress	nucleus	37.13	31.05
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	35.19	30.99
AT1G69440.1	Thale cress	cytosol	28.47	25.25
AT1G31280.1	Thale cress	nucleus	27.45	23.77
AT1G31290.1	Thale cress	nucleus	28.7	21.11

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EntrezGene:817856	ProteinID:AAB91987.1
ProteinID:AEC08765.1	Symbol:AGO6	ArrayExpress:AT2G32940	EnsemblPlantsGene:AT2G32940	RefSeq:AT2G32940	TAIR:AT2G32940
RefSeq:AT2G32940-TAIR-G	EnsemblPlants:AT2G32940.1	TAIR:AT2G32940.1	InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N
Unigene:At.53011	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0006342	GO:GO:0006351	GO:GO:0006355	GO:GO:0006412	GO:GO:0006417
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0030422	GO:GO:0030529
GO:GO:0031047	GO:GO:0035197	GO:GO:0040029	GO:GO:0051607	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	RefSeq:NP_180853.2	UniProt:O48771	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PO:PO:0000293	PO:PO:0009005
PO:PO:0009006	PO:PO:0009015	PO:PO:0020030	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF35	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000034EDFA	SEG:seg	:	:

Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]

Coordinates

chr2:-:13971916..13977521

Molecular Weight (calculated)

98687.1 Da

IEP (calculated)

8.586

GRAVY (calculated)

-0.320

Length

878 amino acids

Sequence
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.