Factsheet for GSMUA_Achr9P27810_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0265600-01	Rice	cytosol, nucleus	23.19	65.37
GSMUA_Achr9P22630_001	Banana	nucleus	64.41	62.61
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	16.07	59.32
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	14.35	57.87
KXG23356	Sorghum	nucleus	56.49	55.85
VIT_12s0059g01430.t01	Wine grape	nucleus	58.32	55.22
TraesCS5D01G169500.1	Wheat	cytosol	55.34	54.65
HORVU0Hr1G012490.1	Barley	nucleus	55.34	54.59
Bra022918.1-P	Field mustard	nucleus	54.19	54.44
CDX84712	Canola	nucleus	54.19	54.44
TraesCS5A01G165900.1	Wheat	cytosol	54.99	54.25
CDX79495	Canola	nucleus	53.96	54.21
TraesCS5B01G162300.1	Wheat	mitochondrion	54.88	53.23
AT2G32940.1	Thale cress	nucleus	53.27	52.85
Zm00001d019905_P003	Maize	nucleus	55.8	52.77
Solyc07g049500.2.1	Tomato	nucleus	54.42	52.49
KRH20672	Soybean	nucleus	54.31	51.81
GSMUA_Achr9P05150_001	Banana	nucleus	53.96	51.37
GSMUA_AchrUn_...	Banana	cytosol	8.38	37.24
GSMUA_Achr7P04100_001	Banana	extracellular	9.76	34.27
GSMUA_Achr6P05310_001	Banana	nucleus	33.3	31.25
GSMUA_Achr4P30720_001	Banana	nucleus	33.18	30.98
GSMUA_Achr7P13220_001	Banana	cytosol	33.07	30.44
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	11.6	28.13
GSMUA_AchrUn_...	Banana	cytosol	9.76	27.96
GSMUA_Achr1P17950_001	Banana	nucleus	33.41	27.58
GSMUA_Achr3P13970_001	Banana	nucleus	33.41	27.45
GSMUA_Achr1P07120_001	Banana	cytosol	33.3	27.44
GSMUA_Achr3P27070_001	Banana	nucleus	33.52	27.14
GSMUA_AchrUn_...	Banana	mitochondrion	33.07	27.07
GSMUA_Achr7P26400_001	Banana	cytosol	19.4	26.53
GSMUA_Achr6P04510_001	Banana	nucleus	31.57	22.23

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSMUA_Achr9G27810_001	EnsemblPlants:GSMUA_Achr9P27810_001	EnsemblPlants:GSMUA_Achr9T27810_001
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M0U438	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF20	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI00029669E3	SEG:seg

Description

Protein argonaute 16 [Source:GMGC_GENE;Acc:GSMUA_Achr9G27810_001]

Coordinates

chr9:+:31996792..32001180

Molecular Weight (calculated)

98062.9 Da

IEP (calculated)

9.418

GRAVY (calculated)

-0.262

Length

871 amino acids

Sequence
(BLAST)

001: MASSSGSKVG VEGSIPQSMT SRAPTYHLMA RPAFGAEGRR IRLFANHFDV KLTMPDAVFY QYTITVTPHD VRDKNAAQSK VYGRKIVNRL FEIYSEELKN
101: KRFVYDGERS LITIGPLPQN NFELTVVLED SSARATAGGA GDGSAVGGDQ KRSKRSGFMK TFTVAIKFVA VFPMRSIALA LRGSEREDGQ SALRVLDIIL
201: KQRQAERFCI PMQILLHTNC YFDGNHTHLV DVGGGVCGGR GFHSSFRTTN GGLSLNIDVS TTIIVKSGPV LEFLLANQNI QDPRRIDWEK YKITGMSKLP
301: CDMQTFSMKE RNSKGETRTV EMTVYNFFQN IRKITLTRSA SLPCLDVGKP QRPIYLPIEL CHLLSLQRYT KGLSSQQGAL LAERCRQTPH ERMRLIADSL
401: NDNRYDKDPL LNACGVSIDK RMTKLTGRVL NCPVLKAGNM EDCIPRNGRW NFVHKTLLEP CELLHDQWAI VNFSGRCDLR HLSRELIKCA RNRGSNIEEP
501: SVFLEEDREW MRSDPIVRVE KMFKKIEAKF TGPPRFILCV LPEKKTCDIY GPWKRKSLYQ FGIVTQCIVP PKNIRDHYLT NVLLKINSKL SGINSLLSVE
601: CKRSIPLISQ TPTMILAMDV SHGPPGSSFP SVAAVVGSRH WPLISRYRAS VRIQSPKLEM IDSLYKPGEN GDEGMLRDLL LDFYKTNGGM KPAQMIIFRD
701: GVSESQFMEV LTVELNQIIK ARDTTMPKFT VIVAQKQHHT RFFLADSPEN VPPGTVVDTT VVHPRNYDFY MYAHGGILGT SRPIHYNVLL DEIGFKPDDL
801: QKLVHALSYV YQRSTSAVSM VAPVCYAHLA ARQLSQCFDL SETSGDELPI RAGVPQLPEL HEKVRSSMFF C

Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Arabidopsis Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.