Factsheet for GSMUA_AchrUn_randomP17780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 3
plasma membrane 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99173	Soybean	cytosol	20.39	39.74
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	56.58	22.14
GSMUA_Achr7P04100_001	Banana	extracellular	17.11	20.97
GSMUA_Achr6P05310_001	Banana	nucleus	56.25	18.43
GSMUA_Achr4P30720_001	Banana	nucleus	56.25	18.33
GSMUA_Achr3P13970_001	Banana	nucleus	63.82	18.3
Solyc03g098280.2.1	Tomato	nucleus	58.55	18.16
GSMUA_Achr1P07120_001	Banana	cytosol	62.17	17.88
GSMUA_AchrUn_...	Banana	mitochondrion	62.5	17.86
GSMUA_Achr1P17950_001	Banana	nucleus	61.84	17.82
GSMUA_Achr3P27070_001	Banana	nucleus	61.84	17.47
GSMUA_Achr7P13220_001	Banana	cytosol	53.29	17.12
PGSC0003DMT400069313	Potato	cytosol	58.88	16.98
Solyc06g072300.2.1	Tomato	nucleus	58.88	16.98
VIT_17s0053g00680.t01	Wine grape	nucleus	59.87	16.77
CDY41831	Canola	nucleus	57.57	16.76
CDY68174	Canola	nucleus	57.57	16.64
AT1G48410.2	Thale cress	nucleus	56.91	16.48
CDY04311	Canola	cytosol, nucleus, plastid	52.63	16.33
Bra014136.1-P	Field mustard	nucleus	57.57	16.22
PGSC0003DMT400079716	Potato	nucleus	59.21	15.97
Bra032254.1-P	Field mustard	nucleus	56.91	15.57
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	17.43	14.76
CDY23683	Canola	cytosol, nucleus, plastid	52.63	14.73
GSMUA_Achr6P04510_001	Banana	nucleus	46.71	11.48
GSMUA_Achr9P22630_001	Banana	nucleus	31.91	10.83
GSMUA_Achr9P05150_001	Banana	nucleus	32.57	10.82
GSMUA_Achr9P27810_001	Banana	plastid	27.96	9.76
GSMUA_Achr7P26400_001	Banana	cytosol	16.12	7.69
GSMUA_AchrUn_...	Banana	cytosol	0.99	1.53
HORVU2Hr1G103840.1	Barley	cytosol	0.99	1.2

Protein Annotations

Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL2	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_AchrUn_randomG17780_001	EnsemblPlants:GSMUA_AchrUn_randomP17780_001	EnsemblPlants:GSMUA_AchrUn_randomT17780_001	InterPro:IPR003165
InterPro:IPR036397	UniProt:M0UA37	InterPro:PAZ_dom_sf	PFAM:PF02171	PFAM:PF16488	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI00029554B1	:	:	:	:

Description

Protein argonaute 1B [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG17780_001]

Coordinates

chrchrUn_random:+:84255571..84260248

Molecular Weight (calculated)

35215.9 Da

IEP (calculated)

9.090

GRAVY (calculated)

-0.199

Length

304 amino acids

Sequence
(BLAST)

001: MKFVVQYFQE TCFRLHVQKM YINIFFNRLL VCKIVKGQRY SKKLNEKQIT ALLEVSCQHP HDRELDIVED NLFLHIPFCF SSFSFQILTV RRNAYHEDPY
101: AEEFGIKICD KFASVEARVL RAPRLKYHDT GREKVCSPRV GQWNMMNKYN SWTCINFERN VPEGVACDFC HKLAQMCQIS GTTKFLHEFA LEPILPPLRA
201: RLNKVERALK FQCCLTKHVF RMSKQYLANV ARKINVKVGG SNTVLMDALS KHMPLVRHTI IFGADVTHPH PGEDSSSSIA AVVTSQDWPE VTKCTWLVCA
301: QAHR

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.