Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 67.74 | 94.59 |
| Zm00001d044183_P001 | Maize | cytosol | 14.29 | 85.64 |
| KRH38925 | Soybean | endoplasmic reticulum | 82.95 | 85.07 |
| Solyc06g072300.2.1 | Tomato | nucleus | 82.4 | 84.82 |
| KRH09472 | Soybean | nucleus | 82.3 | 84.81 |
| PGSC0003DMT400069313 | Potato | cytosol | 82.21 | 84.63 |
| Zm00001d037833_P001 | Maize | mitochondrion | 19.26 | 84.27 |
| Solyc03g098280.2.1 | Tomato | nucleus | 75.76 | 83.88 |
| GSMUA_Achr3P13970_001 | Banana | nucleus | 80.92 | 82.83 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 72.9 | 80.71 |
| AT1G48410.2 | Thale cress | nucleus | 76.96 | 79.52 |
| CDY41831 | Canola | nucleus | 75.94 | 78.93 |
| CDY68174 | Canola | nucleus | 76.5 | 78.9 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 33.0 | 78.68 |
| GSMUA_Achr1P17950_001 | Banana | nucleus | 76.22 | 78.39 |
| PGSC0003DMT400079716 | Potato | nucleus | 81.2 | 78.17 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 76.41 | 77.91 |
| OQU82149 | Sorghum | nucleus | 77.05 | 77.62 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 34.1 | 77.24 |
| Bra014136.1-P | Field mustard | nucleus | 76.68 | 77.11 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.92 | 77.04 |
| GSMUA_Achr1P07120_001 | Banana | cytosol | 74.84 | 76.82 |
| Os04t0566500-04 | Rice | nucleus | 77.51 | 76.39 |
| GSMUA_Achr3P27070_001 | Banana | nucleus | 75.3 | 75.93 |
| Os02t0672200-01 | Rice | cytosol | 75.21 | 75.42 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 76.31 | 75.34 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 76.41 | 75.23 |
| Bra032254.1-P | Field mustard | nucleus | 76.77 | 74.98 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 74.93 | 74.86 |
| TraesCSU01G081900.1 | Wheat | plastid | 67.1 | 74.44 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 76.22 | 73.84 |
| Zm00001d002650_P003 | Maize | nucleus | 76.41 | 73.62 |
| Os02t0831600-01 | Rice | extracellular | 68.48 | 73.49 |
| Zm00001d026111_P014 | Maize | nucleus | 74.1 | 73.42 |
| VIT_05s0020g04190.t01 | Wine grape | nucleus | 59.35 | 73.35 |
| Os06t0729300-01 | Rice | nucleus | 69.4 | 72.54 |
| KXG20965 | Sorghum | nucleus | 69.68 | 72.14 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 67.28 | 72.06 |
| EES18841 | Sorghum | nucleus | 73.18 | 71.6 |
| Zm00001d025331_P002 | Maize | cytosol | 36.41 | 71.56 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.31 | 71.37 |
| Zm00001d025073_P001 | Maize | cytosol | 25.35 | 70.88 |
| TraesCS6A01G254600.2 | Wheat | plastid | 70.88 | 70.88 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 70.88 | 70.88 |
| Zm00001d011096_P059 | Maize | nucleus | 71.98 | 70.49 |
| VIT_11s0016g04620.t01 | Wine grape | cytosol | 58.62 | 70.28 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 66.36 | 69.84 |
| TraesCS6D01G403900.1 | Wheat | plastid | 67.83 | 69.76 |
| TraesCS7A01G557400.1 | Wheat | plastid | 66.27 | 69.67 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 66.18 | 69.57 |
| TraesCSU01G065300.1 | Wheat | nucleus | 76.13 | 69.3 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 71.06 | 69.27 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 72.35 | 68.32 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 76.13 | 68.26 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 75.85 | 68.02 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 66.36 | 67.67 |
| Zm00001d014875_P001 | Maize | nucleus | 65.25 | 65.62 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 72.9 | 65.0 |
| OQU86027 | Sorghum | plastid | 64.98 | 63.86 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 8.94 | 63.4 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 38.62 | 62.91 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.77 | 59.87 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 54.29 | 57.07 |
| TraesCS1D01G151300.3 | Wheat | plastid | 44.42 | 56.77 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 44.15 | 56.42 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 45.16 | 55.94 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 42.58 | 54.29 |
| Os02t0169400-01 | Rice | nucleus | 43.69 | 54.11 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 10.69 | 46.4 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 31.06 | 36.91 |
| VIT_03s0038g00830.t01 | Wine grape | nucleus | 33.73 | 36.56 |
| VIT_12s0059g01430.t01 | Wine grape | nucleus | 30.88 | 36.41 |
| VIT_01s0113g00500.t01 | Wine grape | nucleus | 33.64 | 36.39 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 28.76 | 35.25 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 29.68 | 35.08 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 29.31 | 33.54 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 29.31 | 32.48 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 29.22 | 31.89 |
Protein Annotations
| EntrezGene:100256320 | wikigene:100256320 | MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ProteinID:CCB58806 |
| ProteinID:CCB58806.1 | UniProt:F6HVU3 | EMBL:FN596258 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | EntrezGene:LOC100256320 | wikigene:LOC100256320 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | TIGR:TC68271 | TIGR:TC69202 | TIGR:TC69565 | UniParc:UPI0001985A2A | ArrayExpress:VIT_17s0053g00680 |
| EnsemblPlantsGene:VIT_17s0053g00680 | EnsemblPlants:VIT_17s0053g00680.t01 | unigene:Vvi.9469 | RefSeq:XP_002271225 | RefSeq:XP_002271225.1 | SEG:seg |
Description
No Description!
Coordinates
chr17:+:15919328..15928163
Molecular Weight (calculated)
119712.0 Da
IEP (calculated)
9.710
GRAVY (calculated)
-0.475
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKRRTELP TASSGESSES TQEASGASGG SGGGRGSQQP AATPQQGATG MGFQGGRGWA PQSQQSGRGG YAGGRGPQRG GMAPQQQYTV PTEYQGRGRG
0101: GGAPPQQPPA AAAAYESGSR SRARVGGGRG VEPVSSGGPP SKPLSSDLHQ ATQASYAAGG TPHRVPSEAS SSRQAAESLT QQLQKVSIQQ EVPPSQAIQP
0201: VAPSSKSMRF PLRPGKGVTG KKCIVKANHF FAELPDKDLH QYDVSINPEV TSRGVNRAVM EQLVKLYRES HLGKRLPAYD GRKSLYTAGP LPFISKEFMI
0301: TLIDEDDGTG APRREREFKV VIKLAARADL HHLGLFLQGR QADAPQEALQ VLDIVLRELP TTRYCPVGRS FYSPDLGRRQ PLGEGLESWR GFYQSIRPTQ
0401: MGLSLNIDMS STAFIEPLPV IDFVTQLLNR DVSSRPLSDA DRVKIKKALR GVKVEVTHRG NMRRKYRISG LTSQATRELT FPVDDRGTMK SVVEYFYETY
0501: GFVIQHSQWP CLQVGNQQRP NYLPMEVCKI VEGQRYSKRL NERQITALLK VTCQRPQERE HDIMQTVHHN AYHEDPYAKE FGIKISEKLA SVEARILPAP
0601: WLKYHDTGRE KDCLPQVGQW NMMNKKMVNG GTVNNWICIN FSRGVQESVA RGFCQELAQM CYISGMAFNP EPVLPPITAR PDQVERVLKA RFHEAMTKLQ
0701: PQGKELDLLI VILPDNNGSL YGDLKRICET DLGLVSQCCL HKHVYRMSKQ YLANVALKIN VKVGGRNTVL VDAISRRIPL VSDRPTIIFG ADVTHPHPGE
0801: DSSPSIAAVV ASQDWPEITK YAGLVCAQAH RQELIQDLYK TWQDPVRGTV SGGMIKELLI SFRRATGQKP QRIIFYRDGV SEGQFYQVLL YELDAIRKAC
0901: ASLEPNYQPP VTFVVVQKRH HTRLFANNHN DRNAVDKSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENKFTADGL QSLTNNLCYT
1001: YARCTRSVSI VPPAYYAHLA AFRARFYMEP ETSDSGSMTS GAAAGRGGMG VGGPGPRSTR VSGANAAVRP LPALKENVKR VMFYC
0101: GGAPPQQPPA AAAAYESGSR SRARVGGGRG VEPVSSGGPP SKPLSSDLHQ ATQASYAAGG TPHRVPSEAS SSRQAAESLT QQLQKVSIQQ EVPPSQAIQP
0201: VAPSSKSMRF PLRPGKGVTG KKCIVKANHF FAELPDKDLH QYDVSINPEV TSRGVNRAVM EQLVKLYRES HLGKRLPAYD GRKSLYTAGP LPFISKEFMI
0301: TLIDEDDGTG APRREREFKV VIKLAARADL HHLGLFLQGR QADAPQEALQ VLDIVLRELP TTRYCPVGRS FYSPDLGRRQ PLGEGLESWR GFYQSIRPTQ
0401: MGLSLNIDMS STAFIEPLPV IDFVTQLLNR DVSSRPLSDA DRVKIKKALR GVKVEVTHRG NMRRKYRISG LTSQATRELT FPVDDRGTMK SVVEYFYETY
0501: GFVIQHSQWP CLQVGNQQRP NYLPMEVCKI VEGQRYSKRL NERQITALLK VTCQRPQERE HDIMQTVHHN AYHEDPYAKE FGIKISEKLA SVEARILPAP
0601: WLKYHDTGRE KDCLPQVGQW NMMNKKMVNG GTVNNWICIN FSRGVQESVA RGFCQELAQM CYISGMAFNP EPVLPPITAR PDQVERVLKA RFHEAMTKLQ
0701: PQGKELDLLI VILPDNNGSL YGDLKRICET DLGLVSQCCL HKHVYRMSKQ YLANVALKIN VKVGGRNTVL VDAISRRIPL VSDRPTIIFG ADVTHPHPGE
0801: DSSPSIAAVV ASQDWPEITK YAGLVCAQAH RQELIQDLYK TWQDPVRGTV SGGMIKELLI SFRRATGQKP QRIIFYRDGV SEGQFYQVLL YELDAIRKAC
0901: ASLEPNYQPP VTFVVVQKRH HTRLFANNHN DRNAVDKSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENKFTADGL QSLTNNLCYT
1001: YARCTRSVSI VPPAYYAHLA AFRARFYMEP ETSDSGSMTS GAAAGRGGMG VGGPGPRSTR VSGANAAVRP LPALKENVKR VMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.