Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 43.45 | 98.46 |
| TraesCS7A01G557400.1 | Wheat | plastid | 97.87 | 97.77 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 96.99 | 96.9 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 44.62 | 96.03 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 95.25 | 92.29 |
| Os06t0729300-01 | Rice | nucleus | 81.09 | 80.54 |
| KXG20965 | Sorghum | nucleus | 80.12 | 78.82 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 55.67 | 73.87 |
| TraesCS6D01G403900.1 | Wheat | plastid | 73.81 | 72.13 |
| Zm00001d014875_P001 | Maize | nucleus | 74.98 | 71.64 |
| Solyc03g098280.2.1 | Tomato | nucleus | 65.28 | 68.67 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 64.5 | 67.86 |
| Solyc06g072300.2.1 | Tomato | nucleus | 69.35 | 67.84 |
| PGSC0003DMT400069313 | Potato | cytosol | 69.25 | 67.74 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 69.84 | 66.36 |
| TraesCS7D01G351700.1 | Wheat | cytosol | 60.81 | 65.86 |
| CDY41831 | Canola | nucleus | 66.54 | 65.71 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 69.93 | 65.61 |
| AT1G48410.2 | Thale cress | nucleus | 66.63 | 65.43 |
| CDY68174 | Canola | nucleus | 66.63 | 65.3 |
| Bra014136.1-P | Field mustard | nucleus | 66.73 | 63.76 |
| PGSC0003DMT400079716 | Potato | nucleus | 68.38 | 62.56 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 65.57 | 62.25 |
| Bra032254.1-P | Field mustard | nucleus | 66.93 | 62.11 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 66.93 | 61.99 |
| TraesCS6D01G166300.1 | Wheat | plastid | 56.94 | 61.72 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 31.81 | 59.64 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 69.45 | 59.17 |
| TraesCS4D01G024100.1 | Wheat | plastid | 48.4 | 58.23 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 39.19 | 54.52 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 44.03 | 54.05 |
| TraesCS1D01G151300.3 | Wheat | plastid | 43.06 | 52.3 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 50.82 | 49.76 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 48.79 | 48.51 |
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 22.11 | 43.26 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 17.17 | 37.98 |
| TraesCS5D01G169500.1 | Wheat | cytosol | 30.84 | 36.05 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 32.01 | 34.99 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 31.04 | 34.71 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 30.46 | 34.54 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 30.55 | 31.44 |
| TraesCS2D01G412100.1 | Wheat | plastid | 33.75 | 31.15 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 30.55 | 30.06 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 4.95 | 28.02 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 26.48 | 25.83 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF57 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| EnsemblPlantsGene:TraesCS7D01G553000 | EnsemblPlants:TraesCS7D01G553000.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:-:635844243..635850413
Molecular Weight (calculated)
113956.0 Da
IEP (calculated)
9.347
GRAVY (calculated)
-0.410
Length
1031 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSWRLRMPG FGDEGGGGGR GVGQGRGAGG RGRGGFGFYP QQDGRGGGGG SYQPRGAAQQ WRPAAPAPAH PPQTHANGNG GPAATIAPEL RQAKTDAAAP
0101: APPAQAPPPP VALEAVAEHL DLEDVTDQFD ALSMDGDSAS VTTAAGRELV AVRAPIPRAD SSCKFPHRPG SGRAGTRCLV KANHFLAELP DKDLHQYDVA
0201: ITPETSRVSG RAVMAELVRL HRASYLGGRL PAYDGRKSMY TAGPLPFTSK EFHITVLEED DGSGQERRER TFKVVIRYAA RADLRRLEQY IAGRQAEAPQ
0301: EALQVLDIVL RELPTARYAP YGRSFFSPDF GRRRSLGDGV ESWRGFYQTI RPTQMGLSLN IDMSATSFFE PLPVLDFVGQ LLNADIHSRS LSDAERVKIK
0401: KALRGVKVEV THRGNIRRKY RISGLTPQTT RELSFPVDQG GTVKSVVQYF QETYGFAIQH INLPCLTVGN QQRPNYLPME VCKIVEGQRY SKRLNQGQIR
0501: ALLEETCQRP HDRERDIVQM VNHNSYHDDP YAKEFGIKIS ERLASVEARI LPAPRLKYSE TGREKDCLPR VGQWNMMNKK MVNGARVRSW LCVNFARNVQ
0601: ESMATGFCRE LARMCQASGM DFALEPVLPV IYVRPDQVER GLKARFHDAM TALGPQRKEI ELLIGILPDN NGSLYGDLKR VCEIDLGLIS QCCLTKQVFK
0701: MNKQILANLS LKINVKVGGR NTVLADALTR RIPLVTDKPT IIFGADVTHP HPGEDSSPSI AAVVASQDWP EVTKYAGLVS AQTHRQELIE DLYNVTHDPQ
0801: RGTIHGGMVR ELLISFKRTT GEKPERIIFY RDGVSEGQFY QVLLHELDAI RKACASLEAN YQPLVTFVVV QKRHHTRLFA HNHNDQSTVD KSGNILPGTV
0901: IDSKICHPTE FDFFLCSHAG IKGTSRPAHY HVLWDENNFT ADGLQTLTNN LCYTYARCTR SVSIVPPAYY AHLAAFRARF YMEPDSSDSG SISSARKSGS
1001: STSRSTRAAG AGVVRPLPAL KDSVKKVMFY C
0101: APPAQAPPPP VALEAVAEHL DLEDVTDQFD ALSMDGDSAS VTTAAGRELV AVRAPIPRAD SSCKFPHRPG SGRAGTRCLV KANHFLAELP DKDLHQYDVA
0201: ITPETSRVSG RAVMAELVRL HRASYLGGRL PAYDGRKSMY TAGPLPFTSK EFHITVLEED DGSGQERRER TFKVVIRYAA RADLRRLEQY IAGRQAEAPQ
0301: EALQVLDIVL RELPTARYAP YGRSFFSPDF GRRRSLGDGV ESWRGFYQTI RPTQMGLSLN IDMSATSFFE PLPVLDFVGQ LLNADIHSRS LSDAERVKIK
0401: KALRGVKVEV THRGNIRRKY RISGLTPQTT RELSFPVDQG GTVKSVVQYF QETYGFAIQH INLPCLTVGN QQRPNYLPME VCKIVEGQRY SKRLNQGQIR
0501: ALLEETCQRP HDRERDIVQM VNHNSYHDDP YAKEFGIKIS ERLASVEARI LPAPRLKYSE TGREKDCLPR VGQWNMMNKK MVNGARVRSW LCVNFARNVQ
0601: ESMATGFCRE LARMCQASGM DFALEPVLPV IYVRPDQVER GLKARFHDAM TALGPQRKEI ELLIGILPDN NGSLYGDLKR VCEIDLGLIS QCCLTKQVFK
0701: MNKQILANLS LKINVKVGGR NTVLADALTR RIPLVTDKPT IIFGADVTHP HPGEDSSPSI AAVVASQDWP EVTKYAGLVS AQTHRQELIE DLYNVTHDPQ
0801: RGTIHGGMVR ELLISFKRTT GEKPERIIFY RDGVSEGQFY QVLLHELDAI RKACASLEAN YQPLVTFVVV QKRHHTRLFA HNHNDQSTVD KSGNILPGTV
0901: IDSKICHPTE FDFFLCSHAG IKGTSRPAHY HVLWDENNFT ADGLQTLTNN LCYTYARCTR SVSIVPPAYY AHLAAFRARF YMEPDSSDSG SISSARKSGS
1001: STSRSTRAAG AGVVRPLPAL KDSVKKVMFY C
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.