Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G421000.2 | Wheat | nucleus | 99.73 | 99.46 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 99.45 | 97.59 |
| Zm00001d044183_P001 | Maize | cytosol | 15.2 | 92.27 |
| OQU82149 | Sorghum | nucleus | 90.17 | 92.01 |
| Zm00001d037833_P001 | Maize | mitochondrion | 20.66 | 91.53 |
| KRG99173 | Soybean | cytosol | 12.83 | 90.38 |
| Os04t0566500-04 | Rice | nucleus | 90.45 | 90.28 |
| Zm00001d002650_P003 | Maize | nucleus | 89.35 | 87.21 |
| Zm00001d026111_P014 | Maize | nucleus | 86.35 | 86.67 |
| EES18841 | Sorghum | nucleus | 86.26 | 85.48 |
| Zm00001d011096_P059 | Maize | nucleus | 84.99 | 84.3 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 91.9 | 83.47 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 86.08 | 82.33 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 57.51 | 81.34 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 32.85 | 79.34 |
| Solyc06g072300.2.1 | Tomato | nucleus | 75.25 | 78.46 |
| PGSC0003DMT400069313 | Potato | cytosol | 75.16 | 78.37 |
| Solyc03g098280.2.1 | Tomato | nucleus | 69.61 | 78.06 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 78.98 | 77.99 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 33.67 | 77.24 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 68.43 | 76.73 |
| CDY41831 | Canola | nucleus | 72.61 | 76.44 |
| CDY68174 | Canola | nucleus | 73.16 | 76.43 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 75.34 | 76.31 |
| AT1G48410.2 | Thale cress | nucleus | 72.61 | 76.0 |
| Zm00001d025331_P002 | Maize | cytosol | 37.58 | 74.82 |
| Bra014136.1-P | Field mustard | nucleus | 73.34 | 74.7 |
| Zm00001d025073_P001 | Maize | cytosol | 26.11 | 73.97 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.38 | 72.58 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 71.25 | 72.1 |
| Bra032254.1-P | Field mustard | nucleus | 72.88 | 72.1 |
| PGSC0003DMT400079716 | Potato | nucleus | 73.89 | 72.05 |
| TraesCS7D01G351700.1 | Wheat | cytosol | 61.6 | 71.11 |
| TraesCS6D01G403900.1 | Wheat | plastid | 67.42 | 70.24 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 65.61 | 69.93 |
| TraesCS6D01G166300.1 | Wheat | plastid | 56.78 | 65.62 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 30.85 | 61.64 |
| TraesCS4D01G024100.1 | Wheat | plastid | 46.04 | 59.04 |
| TraesCS1D01G151300.3 | Wheat | plastid | 44.86 | 58.07 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 38.31 | 56.82 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 42.04 | 55.0 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 50.86 | 53.09 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 49.68 | 52.65 |
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 22.29 | 46.49 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 17.02 | 40.13 |
| TraesCS5D01G169500.1 | Wheat | cytosol | 29.3 | 36.51 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 30.3 | 36.12 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 30.85 | 35.95 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 29.3 | 35.42 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 30.03 | 32.93 |
| TraesCS2D01G412100.1 | Wheat | plastid | 32.03 | 31.51 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 29.85 | 31.3 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 4.73 | 28.57 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 25.39 | 26.4 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS2D01G400200 | EnsemblPlants:TraesCS2D01G400200.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg |
Description
No Description!
Coordinates
chr2D:+:513456832..513464263
Molecular Weight (calculated)
122046.0 Da
IEP (calculated)
9.826
GRAVY (calculated)
-0.572
Length
1099 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTGPG SPGESSGEAS GASGQGSSQR AERAPQQHGG GRGLAPQQHG RGGGQHQGRG GHYQGHGSAS HYPGSGPPEY QQRDYQGRGH PGGGPPEYQH
0101: RDYQGRGHPG GGPPEYQPRD YQGRGGPRPR GGGVPQPYYG GHRGGSAGRN VPPGPSRTVP ELHQAPYVQY QAPVVSPSAS GAGSSSQPVS EVSSGQVQQQ
0201: FQKLAIVDQS STSQSSQLAP ASSKSVRFPL RPGKGTHGDR CVVKANHFFA ELPDKDLHQY DVSITPEITS RGVNRAVMAE LVRLYRHSQL DGRLPAYDGR
0301: KSLYTAGPLP FPSKTFEITL HDEEESLVGG QVAPRRERQF RVVIKFAARA DLHHLAMFLA GRQPDAPQEA LQVLDIVLRE LPTARYSPVG RSFYSPNLGR
0401: RQKLGDGLES WRGFYQSIRP TQMGLSLNID MSSTAFIEPL PVIDFVAQLL SRDISVRPLS DSDRVKIKKA LRGVKVEVTH RGNMRRKYRI SGLTSQATRE
0501: LSFPVDDRGT VKTVVQYFLE TYGFNIQHTT LPCLQVGNQQ RPNYLPMEVC KIVEGQRYSK RLNEKQITAL LKVTCQRPQE REKDILQTVH HNAYYEDPYA
0601: QEFGIKIDER LASVEARVLP PPRLKYHDSG REKDVLPRIG QWNMMNKKMV NGGRVSHWAC INFSRNVQDS AARGFCHELA IMCQISGMDF APEPVLPPLT
0701: ARPEHVERAL KARYQDAMNI IRPQGRELDL LIVILPDNNG SLYGDLKRIC ETDLGLVSQC CLTKHVFKMS KQYLANVALK INVKVGGRNT VLVDALTRRI
0801: PLVSDRPTII FGADVTHPHP GEDSSPSIAA VVASQDWPEV TKYAGLVSAQ AHRQELIQDL FKVWQDPQRG TVTGGMIKEL LISFKRATGQ KPQRIIFYRD
0901: GVSEGQFYQV LLYELDAIRK ACASLEPNYQ PPVTFVVVQK RHHTRLFANN HNDQRTVDRS GNILPGTVVD SKICHPTEFD FYLCSHAGIQ GTSRPAHYHV
1001: LWDENKFTAD ELQTLTNNLC YTYARCTRSV SIVPPAYYAH LAAFRARFYM EPDTSDSGSM ASGARGPPQG GRNTRPFGNV AVRPLPALKE NVKRVMFYC
0101: RDYQGRGHPG GGPPEYQPRD YQGRGGPRPR GGGVPQPYYG GHRGGSAGRN VPPGPSRTVP ELHQAPYVQY QAPVVSPSAS GAGSSSQPVS EVSSGQVQQQ
0201: FQKLAIVDQS STSQSSQLAP ASSKSVRFPL RPGKGTHGDR CVVKANHFFA ELPDKDLHQY DVSITPEITS RGVNRAVMAE LVRLYRHSQL DGRLPAYDGR
0301: KSLYTAGPLP FPSKTFEITL HDEEESLVGG QVAPRRERQF RVVIKFAARA DLHHLAMFLA GRQPDAPQEA LQVLDIVLRE LPTARYSPVG RSFYSPNLGR
0401: RQKLGDGLES WRGFYQSIRP TQMGLSLNID MSSTAFIEPL PVIDFVAQLL SRDISVRPLS DSDRVKIKKA LRGVKVEVTH RGNMRRKYRI SGLTSQATRE
0501: LSFPVDDRGT VKTVVQYFLE TYGFNIQHTT LPCLQVGNQQ RPNYLPMEVC KIVEGQRYSK RLNEKQITAL LKVTCQRPQE REKDILQTVH HNAYYEDPYA
0601: QEFGIKIDER LASVEARVLP PPRLKYHDSG REKDVLPRIG QWNMMNKKMV NGGRVSHWAC INFSRNVQDS AARGFCHELA IMCQISGMDF APEPVLPPLT
0701: ARPEHVERAL KARYQDAMNI IRPQGRELDL LIVILPDNNG SLYGDLKRIC ETDLGLVSQC CLTKHVFKMS KQYLANVALK INVKVGGRNT VLVDALTRRI
0801: PLVSDRPTII FGADVTHPHP GEDSSPSIAA VVASQDWPEV TKYAGLVSAQ AHRQELIQDL FKVWQDPQRG TVTGGMIKEL LISFKRATGQ KPQRIIFYRD
0901: GVSEGQFYQV LLYELDAIRK ACASLEPNYQ PPVTFVVVQK RHHTRLFANN HNDQRTVDRS GNILPGTVVD SKICHPTEFD FYLCSHAGIQ GTSRPAHYHV
1001: LWDENKFTAD ELQTLTNNLC YTYARCTRSV SIVPPAYYAH LAAFRARFYM EPDTSDSGSM ASGARGPPQG GRNTRPFGNV AVRPLPALKE NVKRVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.