Factsheet for Zm00001d025331_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99173	Soybean	cytosol	23.01	81.41
Zm00001d025073_P001	Maize	cytosol	53.08	75.52
GSMUA_Achr7P04100_001	Banana	extracellular	30.8	68.55
Zm00001d026146_P001	Maize	nucleus	17.03	64.38
Zm00001d015926_P001	Maize	nucleus	25.91	63.56
Zm00001d018436_P001	Maize	cytosol	13.41	60.66
Zm00001d032611_P002	Maize	vacuole	34.06	50.54
Zm00001d025691_P001	Maize	mitochondrion	16.49	46.67
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	19.38	46.32
Zm00001d009158_P003	Maize	golgi	36.59	46.22
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	62.86	44.66
Zm00001d036886_P001	Maize	plastid	17.93	43.81
Zm00001d011096_P059	Maize	nucleus	80.8	40.25
Solyc03g098280.2.1	Tomato	nucleus	68.3	38.47
EES18841	Sorghum	nucleus	76.81	38.23
TraesCS2D01G400200.1	Wheat	nucleus	74.82	37.58
Os04t0566500-04	Rice	nucleus	74.82	37.51
TraesCS2B01G421000.2	Wheat	nucleus	74.82	37.48
Solyc06g072300.2.1	Tomato	nucleus	70.83	37.1
PGSC0003DMT400069313	Potato	cytosol	70.65	37.0
CDY04311	Canola	cytosol, nucleus, plastid	65.58	36.94
TraesCS2A01G403100.4	Wheat	nucleus	74.64	36.79
AT1G48410.2	Thale cress	nucleus	69.75	36.67
Zm00001d002650_P003	Maize	nucleus	74.64	36.59
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	76.09	36.55
VIT_17s0053g00680.t01	Wine grape	nucleus	71.56	36.41
Zm00001d036917_P009	Maize	nucleus	63.41	36.23
CDY68174	Canola	nucleus	69.02	36.22
CDY41831	Canola	nucleus	68.12	36.02
Zm00001d026111_P014	Maize	nucleus	70.47	35.53
Bra014136.1-P	Field mustard	nucleus	69.02	35.31
Zm00001d046438_P003	Maize	cytosol	63.41	34.83
Zm00001d039440_P001	Maize	cytosol	15.22	34.43
Bra032254.1-P	Field mustard	nucleus	68.48	34.02
PGSC0003DMT400079716	Potato	nucleus	69.02	33.81
TraesCSU01G065300.1	Wheat	nucleus	72.83	33.72
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	72.83	33.22
CDY23683	Canola	cytosol, nucleus, plastid	65.22	33.15
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	72.64	33.14
Zm00001d014875_P001	Maize	nucleus	62.5	31.97
HORVU7Hr1G007000.14	Barley	nucleus	66.85	30.32
Zm00001d013542_P003	Maize	nucleus	51.99	27.2
Zm00001d007786_P001	Maize	nucleus	48.19	25.78
Zm00001d021345_P001	Maize	nucleus	41.85	24.87
Zm00001d013063_P001	Maize	nucleus	44.2	24.16
Zm00001d035554_P001	Maize	plastid	21.92	24.06
Zm00001d033518_P001	Maize	nucleus	50.54	23.5
Zm00001d006351_P001	Maize	nucleus	44.02	23.08
Zm00001d033206_P001	Maize	cytosol	38.04	21.74
Zm00001d040429_P012	Maize	nucleus	32.61	19.98
Zm00001d008249_P012	Maize	nucleus	32.25	19.78
Zm00001d002316_P003	Maize	plastid	30.25	19.51
Zm00001d039214_P025	Maize	nucleus	32.43	19.37
Zm00001d019905_P003	Maize	nucleus	32.25	19.33
Zm00001d026300_P001	Maize	nucleus	30.07	18.84
Zm00001d029573_P001	Maize	cytosol	34.6	18.51
Zm00001d044183_P001	Maize	cytosol	4.53	13.81
Zm00001d037833_P001	Maize	mitochondrion	4.53	10.08

Protein Annotations

Gene3D:1.25.40.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A1D6J6J0	ProteinID:AQK43538.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002885	InterPro:IPR003165
InterPro:IPR011990	InterPro:IPR036397	PFAM:PF02171	PFAM:PF13041	PFscan:PS50822	PFscan:PS51375
PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	InterPro:Pentatricopeptide_repeat	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00950	SUPFAM:SSF53098	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0008445286	EnsemblPlantsGene:Zm00001d025331
EnsemblPlants:Zm00001d025331_P002	EnsemblPlants:Zm00001d025331_T002	:	:	:	:

Description

Protein argonaute 1

Coordinates

chr10:-:114363946..114370019

Molecular Weight (calculated)

61317.1 Da

IEP (calculated)

8.686

GRAVY (calculated)

-0.147

Length

552 amino acids

Sequence
(BLAST)

001: MKANVAADDP RAVLRVFRQM RSDDVDRDLV TYNTLIFGLA RARMVAKARA FLDDMAAEGH LPNVVTYTSL MNRMCVKGDA LGALKLLEEM QGKGSILGPS
101: SSDLRCLCAA PWVGRLLLDP DARGCCRNVQ DGAARSFCHE LGLMCQVSGM DFVLEPVLSP CYARPELVER ALKGRYQDAM NILRPQGREL NLLIVILPDN
201: NGSLYGDVKR ICETNLGLVS QCCLTKHVFK VNKQQYLANV ALKINVKVGG RNTVLVDALA RRIPLVSDIA TIIFSADVTH PHPGEDSSPS IAAVVASQDW
301: PEVTKYAGLV IAQAHRQELI QDLFKVWQDP KRGTFSGGMI RELLISFWRA TGQKPKRIIF YRDGVSEGQF YQVLLYELDA IRKAYASLES DYQPPVTFVV
401: VQKRHHTRLF ANNHNDNRAV DKSGNILPGT MVDSKICHPT EFDFYLCSHA GIQGTSRPAH YHVLWDENNF TADGLQTLTN NLCYTYARCT RSVSIAFRAR
501: FYMEPDTSDS GSMASRGPPL GGRHTKAAGV GNVAVRPLPA LKENVKRVMF YC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.