Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 4
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G065300.1 | Wheat | nucleus | 96.12 | 97.57 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 97.52 | 97.52 |
| Zm00001d044183_P001 | Maize | cytosol | 13.64 | 91.16 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 84.21 | 90.98 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 91.16 | 90.63 |
| Zm00001d037833_P001 | Maize | mitochondrion | 18.43 | 89.92 |
| OQU82149 | Sorghum | nucleus | 79.17 | 88.95 |
| Os04t0566500-04 | Rice | nucleus | 80.83 | 88.83 |
| KRG99173 | Soybean | cytosol | 11.4 | 88.46 |
| Zm00001d026111_P014 | Maize | nucleus | 76.86 | 84.93 |
| Zm00001d002650_P003 | Maize | nucleus | 78.93 | 84.81 |
| EES18841 | Sorghum | nucleus | 76.94 | 83.95 |
| Zm00001d011096_P059 | Maize | nucleus | 75.62 | 82.58 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 76.78 | 80.85 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 51.74 | 80.57 |
| Solyc06g072300.2.1 | Tomato | nucleus | 68.1 | 78.18 |
| PGSC0003DMT400069313 | Potato | cytosol | 68.02 | 78.08 |
| TraesCS6A01G254600.2 | Wheat | plastid | 70.0 | 78.06 |
| Solyc03g098280.2.1 | Tomato | nucleus | 63.22 | 78.06 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 62.56 | 77.24 |
| AT1G48410.2 | Thale cress | nucleus | 66.12 | 76.19 |
| CDY41831 | Canola | nucleus | 65.7 | 76.15 |
| CDY68174 | Canola | nucleus | 66.12 | 76.05 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 68.02 | 75.85 |
| Bra014136.1-P | Field mustard | nucleus | 66.36 | 74.42 |
| Bra032254.1-P | Field mustard | nucleus | 67.02 | 73.0 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 65.45 | 72.93 |
| Zm00001d025331_P002 | Maize | cytosol | 33.14 | 72.64 |
| PGSC0003DMT400079716 | Potato | nucleus | 67.02 | 71.96 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 14.71 | 71.77 |
| Zm00001d025073_P001 | Maize | cytosol | 22.89 | 71.39 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 55.29 | 69.54 |
| TraesCS7A01G557400.1 | Wheat | plastid | 59.01 | 69.19 |
| TraesCS6A01G178100.2 | Wheat | plastid | 51.49 | 65.72 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 35.7 | 64.86 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 42.89 | 61.13 |
| TraesCS4A01G288300.1 | Wheat | plastid | 41.98 | 59.28 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 34.63 | 58.44 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 41.41 | 57.19 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 44.3 | 51.69 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 42.15 | 48.25 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 30.58 | 43.33 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 24.71 | 36.87 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 26.86 | 36.81 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 26.69 | 35.85 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 27.44 | 35.55 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 26.78 | 35.37 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 26.94 | 35.24 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 26.86 | 30.98 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 17.93 | 30.78 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 23.39 | 26.57 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7A01G040700 | EnsemblPlants:TraesCS7A01G040700.5 | TIGR:cd02846 | TIGR:cd04657 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:18877009..18883267
Molecular Weight (calculated)
133949.0 Da
IEP (calculated)
9.646
GRAVY (calculated)
-0.591
Length
1210 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSFCFKLYLS SIFPSLILHN FCNLTFWCIL VLAEPIMVRK KRTGTGESSG EASGAPGQGS SQPAERAPPQ QHQQHGGGRG WVPQQGGRGG GQHLGRGGQY
0101: QGQGGPAAHR PGGPPEYQQR EYQGRGHPGG GPPEYQPRDY QGRGHPGARP PEYQPRDPQG HGHTGGAPPE YQPRGPQGRG HPGGAPPEYQ PRGPQGRGHP
0201: GGAPPEYQPR DPQGRGHPGG GPPEYQQRDY QGRGGPRPRG GGMPQPSYGG HRGGHGGYNV PPGQSRTVPE LHQAPDVQYQ APVVSPSASG AGSSSQPAAE
0301: VSSGQVEQQF QKLDISDQSS TSQAIQPAPA SSKSVRFPLR PGMGKCGDRC VVKANHFFAE LPDKDLHQYD VTITPEVTSR GVNRAVIAEL VKLYRQSHMN
0401: GRLPAYDGRK SLYTAGPLPF TSRTFEIALQ DEDEGLVGGQ ATPRRERQFR VVIKYAARAD LHHLAMFLAG RQPDAPQEAL QVLDIVLREL PTARYSPVSR
0501: SFYSPNLGRR QRLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEPLP VIEFVAQLLC RDISVRPLTD SDRVKIKKAL RGVKVEVTHR GNMRRKYRIS
0601: GLTSQATREL SFPVDDRGTV KTVVQYFLET YGFNIQHTTL PCLQVGNQQR PNYLPMEVCK IVEGQRYSKR LNEKQITALL KVTCQRPQER EKDILQTVHH
0701: NAYYEDPYAQ EFGIKIDEQL ASVEARVLPP PRLKYHDSGR EKDVLPRVGQ WNMMNKKMVN GGRVSHWACI NFSRNVQDNA AKVFCHELAI MCQISGMNFA
0801: PEPVLPVLSA RPEHVERALK ARYHDAMNAS KPPGKELDLL IVILPDNNGS LYGDLKRICE TELGLVSQCC LTKHVFKMSK QYLANVALKI NVKVGGRNTV
0901: LVDALARRIR LVTDRPTIIF GADVTHPHPG EDSSPSIAAV VASQDWPEIT KYAGLVSAQA HRQELIQDLF KVWQDPQRGT VTGGMIKELL ISFKRATGQK
1001: PQRIIFYRDG VSEGQFYQVL LFELDAIRKA CASLEPNYQP PVTFVVVQKR HHTRLFANNH NDQRTVDRSG NILPGTVVDS KICHPTEFDF YLCSHAGIQG
1101: TSRPAHYHVL WDENKFTADE LQTLTNNLCY TYARCTRSVS IVPPAYYAHL AAFRARFYME PDTSDSGSVA SGARGGPPQG GPRSSTRFGN VAVRPLPALK
1201: ENVKRVMFYC
0101: QGQGGPAAHR PGGPPEYQQR EYQGRGHPGG GPPEYQPRDY QGRGHPGARP PEYQPRDPQG HGHTGGAPPE YQPRGPQGRG HPGGAPPEYQ PRGPQGRGHP
0201: GGAPPEYQPR DPQGRGHPGG GPPEYQQRDY QGRGGPRPRG GGMPQPSYGG HRGGHGGYNV PPGQSRTVPE LHQAPDVQYQ APVVSPSASG AGSSSQPAAE
0301: VSSGQVEQQF QKLDISDQSS TSQAIQPAPA SSKSVRFPLR PGMGKCGDRC VVKANHFFAE LPDKDLHQYD VTITPEVTSR GVNRAVIAEL VKLYRQSHMN
0401: GRLPAYDGRK SLYTAGPLPF TSRTFEIALQ DEDEGLVGGQ ATPRRERQFR VVIKYAARAD LHHLAMFLAG RQPDAPQEAL QVLDIVLREL PTARYSPVSR
0501: SFYSPNLGRR QRLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEPLP VIEFVAQLLC RDISVRPLTD SDRVKIKKAL RGVKVEVTHR GNMRRKYRIS
0601: GLTSQATREL SFPVDDRGTV KTVVQYFLET YGFNIQHTTL PCLQVGNQQR PNYLPMEVCK IVEGQRYSKR LNEKQITALL KVTCQRPQER EKDILQTVHH
0701: NAYYEDPYAQ EFGIKIDEQL ASVEARVLPP PRLKYHDSGR EKDVLPRVGQ WNMMNKKMVN GGRVSHWACI NFSRNVQDNA AKVFCHELAI MCQISGMNFA
0801: PEPVLPVLSA RPEHVERALK ARYHDAMNAS KPPGKELDLL IVILPDNNGS LYGDLKRICE TELGLVSQCC LTKHVFKMSK QYLANVALKI NVKVGGRNTV
0901: LVDALARRIR LVTDRPTIIF GADVTHPHPG EDSSPSIAAV VASQDWPEIT KYAGLVSAQA HRQELIQDLF KVWQDPQRGT VTGGMIKELL ISFKRATGQK
1001: PQRIIFYRDG VSEGQFYQVL LFELDAIRKA CASLEPNYQP PVTFVVVQKR HHTRLFANNH NDQRTVDRSG NILPGTVVDS KICHPTEFDF YLCSHAGIQG
1101: TSRPAHYHVL WDENKFTADE LQTLTNNLCY TYARCTRSVS IVPPAYYAHL AAFRARFYME PDTSDSGSVA SGARGGPPQG GPRSSTRFGN VAVRPLPALK
1201: ENVKRVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.