Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G416500.1 | Wheat | nucleus | 95.4 | 96.12 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 92.77 | 92.42 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 45.63 | 68.94 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 47.89 | 48.62 |
| KRH36727 | Soybean | nucleus | 16.9 | 39.74 |
| PGSC0003DMT400054667 | Potato | cytosol | 25.92 | 37.81 |
| KRG89432 | Soybean | nucleus | 32.21 | 35.51 |
| Solyc02g069270.2.1 | Tomato | cytosol | 32.11 | 35.01 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 30.8 | 34.6 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 31.27 | 34.01 |
| PGSC0003DMT400054669 | Potato | cytosol | 33.43 | 33.87 |
| CDY70429 | Canola | plastid | 28.17 | 33.82 |
| Solyc02g069260.2.1 | Tomato | nucleus | 32.96 | 33.69 |
| Bra040815.1-P | Field mustard | cytosol | 31.46 | 33.2 |
| CDY25885 | Canola | cytosol | 31.46 | 33.17 |
| CDY55876 | Canola | cytosol | 32.11 | 33.04 |
| Solyc02g069280.2.1 | Tomato | nucleus | 30.99 | 33.03 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 30.7 | 32.9 |
| CDY02373 | Canola | nucleus | 31.46 | 32.75 |
| AT1G31280.1 | Thale cress | nucleus | 31.08 | 32.64 |
| Bra023172.1-P | Field mustard | nucleus | 31.74 | 32.59 |
| KRH11732 | Soybean | nucleus | 31.27 | 32.11 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 19.25 | 30.78 |
| PGSC0003DMT400054661 | Potato | nucleus | 27.98 | 30.41 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 23.29 | 29.21 |
| AT1G31290.1 | Thale cress | nucleus | 32.39 | 28.89 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 19.44 | 28.87 |
| TraesCS4A01G288300.1 | Wheat | plastid | 22.16 | 27.54 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 24.04 | 27.41 |
| TraesCS7A01G557400.1 | Wheat | plastid | 25.82 | 26.65 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 23.94 | 26.51 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 21.69 | 26.37 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 20.75 | 25.88 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 24.98 | 25.65 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 25.26 | 25.45 |
| TraesCS6A01G178100.2 | Wheat | plastid | 22.54 | 25.32 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 26.1 | 24.82 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 18.69 | 24.54 |
| TraesCS6A01G254600.2 | Wheat | plastid | 24.88 | 24.42 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 20.47 | 23.57 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 19.91 | 23.53 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 26.57 | 23.39 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 19.25 | 23.22 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 19.91 | 23.14 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 | InterPro:Argonaute_N |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF16486 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| EnsemblPlantsGene:TraesCS2A01G419500 | EnsemblPlants:TraesCS2A01G419500.1 | TIGR:cd02846 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:-:675079735..675086052
Molecular Weight (calculated)
118442.0 Da
IEP (calculated)
9.200
GRAVY (calculated)
-0.674
Length
1065 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANRRGGGGR DGGRDSGDKR GGGGGRNRGR GGGRAAPPAG GRGPRDEVDE TRGGGSAPVG DQNRGGGASR GLGQYRGGGG ADRDRGASSY ARGGDRGAGG
0101: EDYGRVDNAY GRYQSPRGGG GDPSGSRGRE GRGSGSNGPR DPYHHGGEQG RGAGGGDHGA GGGPYGGYQG RGGGEDYYPS RWHGGGRGPY GYHPAPQEER
0201: RRDKYPQQYA PTPSPKKIPS KEVASPSRPG VRKIGPIEEV EVKLWVNHFS IKFGESTVFH YGVKLAQVSP EASGGLELSM ADQNFVNAQL LKMLQKSPHS
0301: LVVASDGKGN LYSFAKLPEG LSLPVSVRSR AYNASVEFKD ELPFRSDQHV PRNVLQALDV IVRQASSYEK IIIGQTLYSP QWLVLEGSNH VHVQALGGTK
0401: QTLKPTEQGL VLCVDYSVMD FCKPESRVLD LVEHLLKRFG RRNHLNPRSP ALDKEEWEYL KSQLRGLCIT VSYQKKSSEG KRDAPTVRKY KVQDLTAENA
0501: EQIIFKEFKV DKSWELVQYY RQQYGEDIQY KMLPCLILSK REDKPNYVPI ELCRLHRCQK YPKDSSQEPR RPPPSDERKI MIERMVNDGL DGPCRGGNRG
0601: EQFRISLDTQ MTEVTSRILL PPVLKLGDSK ELSIRLANRQ WNLQDHKIFD GQSLKCWGVL DFSGQETRFR DAFIAKIVRK CNNLGITMFC EPSLVHKSAM
0701: LVLSDPDKLR RELSKAKEAA EEKGQKLQLL FCPMSELHPG YKTLKLICEI ELGMQTQCLL TQLANKEGKG QDQYLSNLAL KINSKLGGSN MQLSRELPMV
0801: TGTRFMFIGA DVNHPPPGDT VSLSIAAVVA SMDCPSASQY VPRIRAQRHR SEEIDNLGTM CKELIQVYME RNGGFKPDKI IYFRDGVSDE QFKMVLDKEL
0901: VSMEKGICED DYSPTITVVV AKKRHNTRLF PKDENELQTT NGNVLPGTVV DTVVVDESHD DFFLCSHDGL HGTSRPTHYY MLKNGHGFKR VDLQKLVYSM
1001: CFMFARCTKP VSLTAPIKYA DITAYRGRDY YDSRMDSLQF QAQFQAVEFP ELRVHPDLRD KMFFV
0101: EDYGRVDNAY GRYQSPRGGG GDPSGSRGRE GRGSGSNGPR DPYHHGGEQG RGAGGGDHGA GGGPYGGYQG RGGGEDYYPS RWHGGGRGPY GYHPAPQEER
0201: RRDKYPQQYA PTPSPKKIPS KEVASPSRPG VRKIGPIEEV EVKLWVNHFS IKFGESTVFH YGVKLAQVSP EASGGLELSM ADQNFVNAQL LKMLQKSPHS
0301: LVVASDGKGN LYSFAKLPEG LSLPVSVRSR AYNASVEFKD ELPFRSDQHV PRNVLQALDV IVRQASSYEK IIIGQTLYSP QWLVLEGSNH VHVQALGGTK
0401: QTLKPTEQGL VLCVDYSVMD FCKPESRVLD LVEHLLKRFG RRNHLNPRSP ALDKEEWEYL KSQLRGLCIT VSYQKKSSEG KRDAPTVRKY KVQDLTAENA
0501: EQIIFKEFKV DKSWELVQYY RQQYGEDIQY KMLPCLILSK REDKPNYVPI ELCRLHRCQK YPKDSSQEPR RPPPSDERKI MIERMVNDGL DGPCRGGNRG
0601: EQFRISLDTQ MTEVTSRILL PPVLKLGDSK ELSIRLANRQ WNLQDHKIFD GQSLKCWGVL DFSGQETRFR DAFIAKIVRK CNNLGITMFC EPSLVHKSAM
0701: LVLSDPDKLR RELSKAKEAA EEKGQKLQLL FCPMSELHPG YKTLKLICEI ELGMQTQCLL TQLANKEGKG QDQYLSNLAL KINSKLGGSN MQLSRELPMV
0801: TGTRFMFIGA DVNHPPPGDT VSLSIAAVVA SMDCPSASQY VPRIRAQRHR SEEIDNLGTM CKELIQVYME RNGGFKPDKI IYFRDGVSDE QFKMVLDKEL
0901: VSMEKGICED DYSPTITVVV AKKRHNTRLF PKDENELQTT NGNVLPGTVV DTVVVDESHD DFFLCSHDGL HGTSRPTHYY MLKNGHGFKR VDLQKLVYSM
1001: CFMFARCTKP VSLTAPIKYA DITAYRGRDY YDSRMDSLQF QAQFQAVEFP ELRVHPDLRD KMFFV
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.