Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023172.1-P | Field mustard | nucleus | 99.51 | 98.17 |
| CDY70429 | Canola | plastid | 84.16 | 97.07 |
| AT1G31280.1 | Thale cress | nucleus | 82.31 | 83.04 |
| CDY25885 | Canola | cytosol | 78.79 | 79.8 |
| CDY55876 | Canola | cytosol | 79.77 | 78.84 |
| AT1G31290.1 | Thale cress | nucleus | 69.5 | 59.55 |
| PGSC0003DMT400054667 | Potato | cytosol | 34.7 | 48.63 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 44.87 | 48.42 |
| KRG89432 | Soybean | nucleus | 45.45 | 48.14 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 45.16 | 47.19 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 45.36 | 46.68 |
| Solyc02g069270.2.1 | Tomato | cytosol | 44.18 | 46.26 |
| KRH36727 | Soybean | nucleus | 20.33 | 45.92 |
| Solyc02g069260.2.1 | Tomato | nucleus | 46.14 | 45.3 |
| PGSC0003DMT400054669 | Potato | cytosol | 46.04 | 44.81 |
| KRH11732 | Soybean | nucleus | 43.4 | 42.82 |
| Zm00001d002316_P003 | Maize | plastid | 34.21 | 40.89 |
| Zm00001d026300_P001 | Maize | nucleus | 35.09 | 40.75 |
| Solyc02g069280.2.1 | Tomato | nucleus | 39.59 | 40.54 |
| PGSC0003DMT400054661 | Potato | nucleus | 36.95 | 38.57 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 38.42 | 38.01 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 25.9 | 37.59 |
| KXG27113 | Sorghum | nucleus | 39.39 | 36.9 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 37.54 | 36.71 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 37.44 | 36.55 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 28.64 | 36.49 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 37.34 | 36.49 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 37.34 | 36.42 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 7.72 | 33.47 |
| CDY51501 | Canola | nucleus | 28.35 | 32.26 |
| CDY28550 | Canola | cytosol, plastid | 30.69 | 32.17 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 33.33 | 31.9 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 32.94 | 31.88 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 31.67 | 31.8 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 32.75 | 31.46 |
| CDY72062 | Canola | plastid | 8.99 | 30.98 |
| CDY07349 | Canola | nucleus | 29.72 | 30.89 |
| CDX71410 | Canola | nucleus | 28.64 | 30.78 |
| CDY22332 | Canola | plastid | 29.33 | 30.77 |
| CDY41831 | Canola | nucleus | 31.18 | 30.56 |
| CDX94724 | Canola | plastid | 29.23 | 30.48 |
| CDY04517 | Canola | plastid | 28.35 | 30.3 |
| CDY68174 | Canola | nucleus | 30.99 | 30.13 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 28.54 | 29.8 |
| CDX92417 | Canola | nucleus | 17.89 | 28.42 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 29.72 | 27.99 |
| CDX84712 | Canola | nucleus | 23.56 | 27.8 |
| CDX79495 | Canola | nucleus | 23.46 | 27.68 |
| CDX92406 | Canola | nucleus | 24.05 | 27.21 |
| CDY59516 | Canola | nucleus | 24.05 | 27.15 |
| CDY16587 | Canola | nucleus | 22.87 | 26.53 |
| CDX92405 | Canola | nucleus | 23.46 | 26.23 |
| CDY09103 | Canola | nucleus | 23.07 | 26.05 |
| CDY04475 | Canola | nucleus | 23.46 | 26.0 |
| CDY56413 | Canola | nucleus | 23.46 | 26.0 |
| CDY48192 | Canola | nucleus | 23.26 | 25.81 |
| CDX77061 | Canola | nucleus | 23.07 | 25.6 |
| CDY16595 | Canola | nucleus | 20.33 | 22.61 |
| CDY62055 | Canola | nucleus | 8.7 | 15.45 |
| Os04t0615800-01 | Rice | nucleus | 0.29 | 0.57 |
Protein Annotations
| MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078ES25 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_N | EnsemblPlants:CDY02373 | ProteinID:CDY02373 | ProteinID:CDY02373.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00113872001 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 |
| PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 |
| SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0004EE6F73 | SEG:seg | : |
Description
BnaA09g25290D
Coordinates
chrLK031933:+:1031455..1035166
Molecular Weight (calculated)
113915.0 Da
IEP (calculated)
10.181
GRAVY (calculated)
-0.570
Length
1023 amino acids
Sequence
(BLAST)
(BLAST)
0001: MERGGYRGGR ADGRGRGGRG RGDGDGGGRS YGRGGGDRGR GFGVGGADRG RGYGGRASER GGGRGGDQQD FRSQSQWGPP PGQVGLGTQL QQQPRPHVVQ
0101: QPPQAQVSQS VAGGGVGRGA WGRKLQVSPD TAAVPPSASS TVAVSETARG SEITNPRPSQ VASSSSSDKK VQVVSSSSAR KEPMKRPDKG GVVAVRRVNL
0201: LVNHFQVNIN PQTVIRHYDV EIKGENPTKK ISRFELSMVR DKLFTDNPHE FPFAMTAYDG QKNIFSAAEL PTGSFKVDFP KTDETRARSY TFTINRVNEL
0301: KLRDLKEYMS GGSSFNPRDV LQGMDVVMKE HPSKCMITVG KSFFTRETER DEELGYGIAA AKGYRHTLKP TQQGLSLCLD YSVLAFRKSM SVIEYLKLYF
0401: DWPDLRQFRN ARRNVEKELT GLKVTVTHRK NKQKLTIVGL SREDTKDIKF DIIDPEGNEP PRRTSIVEYF RIKYGRDIVH KDIPCLDLGK NGRQNLVPME
0501: FCVLVEGQIY PKDDLDKNSA LWLKKLSLVN PRQRKDNILK MIKSKEGPSG GEITGNFGMK VDTNMTRVEG RVLKAPALKL AERGRAVREE PNPRQNNQWN
0601: LMRKGVTRGS VVKHWAVLDF TASERFNKMP NDFVNNLINR CWTLGMQLEP PIVYKSSRMD TLSNANALEE LLRNVIDEAH RNHGGARPTL ILCAMTGRVD
0701: GYKTLKWIAE TKLGLVTQCF LTGSATKGGD QYRANLALKI NAKVGGSNVE LMDTFSFFRK DDQVMFIGAD VNHPASRDKM SPSIVAVVGT LNWPEANRYA
0801: ARVIAQPHRK EEIQGFGETC LELVKAHVQS TGKRPNKIVI FRDGVSDGQF DMVLNVELLD VKLTFEKNGY NPKITVIVAQ KRHQTRFFPA TDNDGSDKGN
0901: VPSGTVVDTK VIHPFEYDFY LCSHHGGIGT SKPTHYYTLW DELGFTSDQV QKLIFEMCFT FTRCTKPVSL VPPVYYADMV AYRGRMYHEA SSREKNIKQQ
1001: PRGASSSSLA SSFSSLTNVM FFV
0101: QPPQAQVSQS VAGGGVGRGA WGRKLQVSPD TAAVPPSASS TVAVSETARG SEITNPRPSQ VASSSSSDKK VQVVSSSSAR KEPMKRPDKG GVVAVRRVNL
0201: LVNHFQVNIN PQTVIRHYDV EIKGENPTKK ISRFELSMVR DKLFTDNPHE FPFAMTAYDG QKNIFSAAEL PTGSFKVDFP KTDETRARSY TFTINRVNEL
0301: KLRDLKEYMS GGSSFNPRDV LQGMDVVMKE HPSKCMITVG KSFFTRETER DEELGYGIAA AKGYRHTLKP TQQGLSLCLD YSVLAFRKSM SVIEYLKLYF
0401: DWPDLRQFRN ARRNVEKELT GLKVTVTHRK NKQKLTIVGL SREDTKDIKF DIIDPEGNEP PRRTSIVEYF RIKYGRDIVH KDIPCLDLGK NGRQNLVPME
0501: FCVLVEGQIY PKDDLDKNSA LWLKKLSLVN PRQRKDNILK MIKSKEGPSG GEITGNFGMK VDTNMTRVEG RVLKAPALKL AERGRAVREE PNPRQNNQWN
0601: LMRKGVTRGS VVKHWAVLDF TASERFNKMP NDFVNNLINR CWTLGMQLEP PIVYKSSRMD TLSNANALEE LLRNVIDEAH RNHGGARPTL ILCAMTGRVD
0701: GYKTLKWIAE TKLGLVTQCF LTGSATKGGD QYRANLALKI NAKVGGSNVE LMDTFSFFRK DDQVMFIGAD VNHPASRDKM SPSIVAVVGT LNWPEANRYA
0801: ARVIAQPHRK EEIQGFGETC LELVKAHVQS TGKRPNKIVI FRDGVSDGQF DMVLNVELLD VKLTFEKNGY NPKITVIVAQ KRHQTRFFPA TDNDGSDKGN
0901: VPSGTVVDTK VIHPFEYDFY LCSHHGGIGT SKPTHYYTLW DELGFTSDQV QKLIFEMCFT FTRCTKPVSL VPPVYYADMV AYRGRMYHEA SSREKNIKQQ
1001: PRGASSSSLA SSFSSLTNVM FFV
0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
Arabidopsis Description
AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.