Factsheet for Os04t0615800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0265600-01	Rice	cytosol, nucleus	0.57	0.97
Os03t0789500-01	Rice	cytosol	0.38	0.88
Zm00001d002316_P003	Maize	plastid	0.76	0.47
Zm00001d026300_P001	Maize	nucleus	0.76	0.45
KRH36727	Soybean	nucleus	0.38	0.44
Os03t0682200-00	Rice	nucleus	0.38	0.43
PGSC0003DMT400054667	Potato	cytosol	0.57	0.41
Os07t0471300-01	Rice	nucleus	0.57	0.4
Os04t0615700-01	Rice	nucleus, plasma membrane	0.76	0.39
TraesCS2B01G439000.2	Wheat	nucleus, unclear	0.76	0.38
HORVU2Hr1G098650.1	Barley	nucleus	0.76	0.38
TraesCS2D01G417000.1	Wheat	nucleus	0.76	0.38
TraesCS2A01G419900.1	Wheat	nucleus	0.76	0.38
KXG27113	Sorghum	nucleus	0.76	0.37
Os02t0169400-01	Rice	nucleus	0.57	0.34
CDY70429	Canola	plastid	0.57	0.34
Os01t0275600-01	Rice	nucleus	0.57	0.33
Os04t0151800-02	Rice	nucleus	0.57	0.33
VIT_10s0042g01180.t01	Wine grape	nucleus, plastid	0.57	0.32
KRG89432	Soybean	nucleus	0.57	0.31
Solyc02g069270.2.1	Tomato	cytosol	0.57	0.31
VIT_10s0042g01150.t01	Wine grape	nucleus	0.57	0.31
PGSC0003DMT400054661	Potato	nucleus	0.57	0.31
VIT_10s0042g01200.t01	Wine grape	nucleus	0.57	0.3
Solyc02g069280.2.1	Tomato	nucleus	0.57	0.3
Bra040815.1-P	Field mustard	cytosol	0.57	0.3
CDY25885	Canola	cytosol	0.57	0.3
AT1G31280.1	Thale cress	nucleus	0.57	0.3
CDY02373	Canola	nucleus	0.57	0.29
CDY55876	Canola	cytosol	0.57	0.29
Bra023172.1-P	Field mustard	nucleus	0.57	0.29
KRH11732	Soybean	nucleus	0.57	0.29
Solyc02g069260.2.1	Tomato	nucleus	0.57	0.29
PGSC0003DMT400054669	Potato	cytosol	0.57	0.29
Os03t0682600-00	Rice	nucleus	0.38	0.27
AT1G31290.1	Thale cress	nucleus	0.57	0.25
Os06t0597400-01	Rice	cytosol	0.38	0.2
Os02t0831600-01	Rice	extracellular	0.38	0.2
Os06t0729300-01	Rice	nucleus	0.38	0.19
Os03t0449200-00	Rice	nucleus	0.38	0.19
Os07t0188000-01	Rice	nucleus	0.38	0.19
Os03t0800200-01	Rice	plasma membrane	0.38	0.19
Os02t0672200-01	Rice	cytosol	0.38	0.18
Os04t0566500-04	Rice	nucleus	0.38	0.18
Os02t0616300-00	Rice	vacuole	0.0	0.0
Os01t0275200-00	Rice	golgi, peroxisome, plastid	0.0	0.0
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Os04t0615800-01	EnsemblPlantsGene:Os04g0615800	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
PANTHER:PTHR22891	PANTHER:PTHR22891:SF4	PFAM:PF02171	PFscan:PS50822	ProteinID:BAS91003.1	SEG:seg
SMART:SM00950	SUPFAM:SSF53098	UniParc:UPI0000DD9288	UniProt:A0A0P0WER6	MapMan:35.1	:

Description

ARGONAUTE 3Similar to H0525G02.5 protein. (Os04t0615800-01)

Coordinates

chr4:+:31247863..31249612

Molecular Weight (calculated)

57454.9 Da

IEP (calculated)

6.921

GRAVY (calculated)

-0.258

Length

523 amino acids

Sequence
(BLAST)

001: ISLDAAMMEV TGRILAPPTL ELGTGTSRGQ TFKFTIHQDD CQWNWKLKKY DKRVVAHGGT LNCWGVVDFS EGDLESKFID KVVRKCSALG MVMTRKPCYE
101: HVSNMEVLSD PKSLRDALIE AKRAAEEEDK KLQLLFCPML NRCHGYKTLK LMCETELGIQ TQCFLSTAAK LDEKRQDQYI TNLALKINGK IGGSNMQLDP
201: DSIPVVSAKD FMFIGADVNH PPPGNVSKDI PSIAAVVASV DKGASKYVTR IRAQYHRCEM IQNLGDICKE LIGAYEKVNK KKPDSIIYFR DGVSDGQFDM
301: VLNEELADME NKIMVGDYPK ITVIVAKKRH HTRLFPKDRN QRQTKNGNVL PGTVVDTDVV DPTAYDFYLC SHKGEVGTSR PTHYYSLLDE HGFASDDLQK
401: LVYNLCFVFA RCTKPVSLAT PVYYADLAAY RGRLYYEGMM MLQPAASAAS ASEAMMPAAQ PQAAAAAAAA ASPSSSAASS SEGMTASQPQ APAAEAASSS
501: AGAADFRELP PMHGDLLNNM FFL

Best Arabidopsis Sequence Match ( AT1G31280.1 )
(BLAST)

0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV

Arabidopsis Description

AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.