Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25885 | Canola | cytosol | 91.01 | 93.27 |
| CDY70429 | Canola | plastid | 68.5 | 79.93 |
| AT1G31280.1 | Thale cress | nucleus | 78.26 | 79.88 |
| CDY02373 | Canola | nucleus | 78.84 | 79.77 |
| AT1G31290.1 | Thale cress | nucleus | 68.99 | 59.8 |
| PGSC0003DMT400054667 | Potato | cytosol | 34.01 | 48.22 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 43.96 | 48.0 |
| KRG89432 | Soybean | nucleus | 44.64 | 47.83 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 44.73 | 47.29 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 45.41 | 47.28 |
| KRH36727 | Soybean | nucleus | 20.58 | 47.02 |
| Solyc02g069270.2.1 | Tomato | cytosol | 42.61 | 45.14 |
| Solyc02g069260.2.1 | Tomato | nucleus | 45.12 | 44.82 |
| PGSC0003DMT400054669 | Potato | cytosol | 45.22 | 44.53 |
| KRH11732 | Soybean | nucleus | 43.48 | 43.39 |
| Zm00001d002316_P003 | Maize | plastid | 33.14 | 40.07 |
| Solyc02g069280.2.1 | Tomato | nucleus | 38.36 | 39.74 |
| Zm00001d026300_P001 | Maize | nucleus | 33.33 | 39.16 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 38.84 | 38.88 |
| PGSC0003DMT400054661 | Potato | nucleus | 35.94 | 37.96 |
| KXG27113 | Sorghum | nucleus | 38.74 | 36.72 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 36.81 | 36.42 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 36.81 | 36.39 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 36.81 | 36.35 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 36.72 | 36.23 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 24.64 | 36.17 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 27.54 | 35.49 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 7.92 | 34.75 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 33.43 | 32.73 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 33.72 | 32.65 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 33.04 | 32.11 |
| CDY72062 | Canola | plastid | 9.18 | 31.99 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 31.01 | 31.5 |
| CDY51501 | Canola | nucleus | 26.96 | 31.03 |
| CDY28550 | Canola | cytosol, plastid | 28.89 | 30.64 |
| CDX71410 | Canola | nucleus | 28.12 | 30.57 |
| CDY22332 | Canola | plastid | 28.7 | 30.46 |
| CDY41831 | Canola | nucleus | 30.53 | 30.27 |
| CDY04517 | Canola | plastid | 27.92 | 30.2 |
| CDX94724 | Canola | plastid | 28.5 | 30.07 |
| CDY07349 | Canola | nucleus | 28.5 | 29.98 |
| CDY68174 | Canola | nucleus | 30.34 | 29.85 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 27.63 | 29.18 |
| CDX92417 | Canola | nucleus | 17.78 | 28.57 |
| CDX84712 | Canola | nucleus | 23.67 | 28.26 |
| CDX79495 | Canola | nucleus | 23.57 | 28.14 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 29.08 | 27.72 |
| CDX92406 | Canola | nucleus | 23.57 | 26.99 |
| CDY59516 | Canola | nucleus | 23.57 | 26.93 |
| CDY16587 | Canola | nucleus | 22.32 | 26.19 |
| CDY09103 | Canola | nucleus | 22.71 | 25.94 |
| CDX92405 | Canola | nucleus | 22.9 | 25.9 |
| CDY48192 | Canola | nucleus | 22.8 | 25.6 |
| CDX77061 | Canola | nucleus | 22.8 | 25.6 |
| CDY56413 | Canola | nucleus | 22.8 | 25.57 |
| CDY04475 | Canola | nucleus | 22.8 | 25.57 |
| CDY16595 | Canola | nucleus | 19.61 | 22.07 |
| CDY62055 | Canola | nucleus | 8.79 | 15.8 |
| Os04t0615800-01 | Rice | nucleus | 0.29 | 0.57 |
Protein Annotations
| MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078J1P7 | UniProt:A0A078J1P7 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_N | EnsemblPlants:CDY55876 | ProteinID:CDY55876 | ProteinID:CDY55876.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00017472001 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 |
| PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 |
| InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 |
| SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0004EE376F | SEG:seg | : | : |
Description
BnaC06g41790DBnaC06g41790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1P7]
Coordinates
chrLK033435:-:25264..28603
Molecular Weight (calculated)
114355.0 Da
IEP (calculated)
10.012
GRAVY (calculated)
-0.539
Length
1035 amino acids
Sequence
(BLAST)
(BLAST)
0001: MERGGYRGGR GGDGRGRGGG GRGDGSGRGY GAGGGGGGDR GRGYGAGGGG DRGRGYGSRG GGDRGRGYGA RGGDFGNRGQ SSGGSGGGYD RNQQEVRSQS
0101: QWGPPPGHGG RGTQSQQQPP PQAVQQPPQA QVSQPGGVGR GAWGRKPQIF SDTAAAAAVP PSSPSTVSVS ETARVASTER KVPMRRPDKG GVVAVRRVNL
0201: FVNHFRVHID PESVIKHYDV DIKREISSKK ISRFELCMVR DKLFTDNPGE FPLDMTAYDG QKNIFSAAQL PTGSYKVDFP KTEETRARSY TFTIKQVNEL
0301: KLRDLKEYMT GGSSLNPRDV LQGMDVVMKE HPSKCMITVG KSFFTRETER DDDLGFGLAA ARGYKHALKP TAQGLSLCLD YSVLAFRKSM SVIEYLKHYF
0401: GWSDVQRQFN RRDVEMELTG LKVTVTHRKN KQKLTIVGLS RKDTKDEGFE LIDETGNEPP RKTSIVEYFR IKYGKDIVHK NIPCLDLGKN GRQNLVPMEL
0501: CILVEGQIYP KEGLDRDSAL WLKTLSLVNP QQRQRNILKM IESSAGPSGG EIIGNFGMKV DTKMTPVVGR VLKAPALKLA ERGKPVREEP GRNNQWNLMK
0601: KGVTRGSVVK HWAVLDFTAF ERNTNSRMAN DFVGLLINRC GTLGMQLEDP IIFKSARMDL LSKANALEDL LRQVIDEASH KHGGARPTLV LCAMSARVDG
0701: YKTLKWIAET KLGLVTQCFL TNSANRGGDQ YRANLALKIN AKVGGSNVEL MDTGYSFFKR EDEVMFIGAD VNHPAARDQT SPSIVAVVGT LNWPEANRYA
0801: ARVIAQPRRK EEIEGFGDTC LELVKAHFQA TKKRPNKIVI FRDGVSDGQF DMVLNSELLD VKLTFGRNNY FPKITVIVAQ KRHQTRFFPA TPNDASDKGN
0901: VPSGTVVDTK VIHPFEYDFY LCSHHGGIGT SKPTHYYALW DELDFTSDQM QKLIFDMCFT FTRCTKPVSL VPPVYYADMV AFRGRMYHEA SSREKNIRQP
1001: RGAPPPPADS LSALTLEDKA IFKLHKELEN VMFFV
0101: QWGPPPGHGG RGTQSQQQPP PQAVQQPPQA QVSQPGGVGR GAWGRKPQIF SDTAAAAAVP PSSPSTVSVS ETARVASTER KVPMRRPDKG GVVAVRRVNL
0201: FVNHFRVHID PESVIKHYDV DIKREISSKK ISRFELCMVR DKLFTDNPGE FPLDMTAYDG QKNIFSAAQL PTGSYKVDFP KTEETRARSY TFTIKQVNEL
0301: KLRDLKEYMT GGSSLNPRDV LQGMDVVMKE HPSKCMITVG KSFFTRETER DDDLGFGLAA ARGYKHALKP TAQGLSLCLD YSVLAFRKSM SVIEYLKHYF
0401: GWSDVQRQFN RRDVEMELTG LKVTVTHRKN KQKLTIVGLS RKDTKDEGFE LIDETGNEPP RKTSIVEYFR IKYGKDIVHK NIPCLDLGKN GRQNLVPMEL
0501: CILVEGQIYP KEGLDRDSAL WLKTLSLVNP QQRQRNILKM IESSAGPSGG EIIGNFGMKV DTKMTPVVGR VLKAPALKLA ERGKPVREEP GRNNQWNLMK
0601: KGVTRGSVVK HWAVLDFTAF ERNTNSRMAN DFVGLLINRC GTLGMQLEDP IIFKSARMDL LSKANALEDL LRQVIDEASH KHGGARPTLV LCAMSARVDG
0701: YKTLKWIAET KLGLVTQCFL TNSANRGGDQ YRANLALKIN AKVGGSNVEL MDTGYSFFKR EDEVMFIGAD VNHPAARDQT SPSIVAVVGT LNWPEANRYA
0801: ARVIAQPRRK EEIEGFGDTC LELVKAHFQA TKKRPNKIVI FRDGVSDGQF DMVLNSELLD VKLTFGRNNY FPKITVIVAQ KRHQTRFFPA TPNDASDKGN
0901: VPSGTVVDTK VIHPFEYDFY LCSHHGGIGT SKPTHYYALW DELDFTSDQM QKLIFDMCFT FTRCTKPVSL VPPVYYADMV AFRGRMYHEA SSREKNIRQP
1001: RGAPPPPADS LSALTLEDKA IFKLHKELEN VMFFV
0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
Arabidopsis Description
AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.