Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04517 | Canola | plastid | 95.8 | 95.3 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 79.1 | 75.53 |
| Zm00001d015926_P001 | Maize | nucleus | 15.97 | 67.56 |
| TraesCS4B01G026600.1 | Wheat | cytosol | 33.3 | 65.36 |
| EER90726 | Sorghum | cytosol | 56.3 | 63.13 |
| Zm00001d018436_P001 | Maize | cytosol | 8.09 | 63.11 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 55.57 | 62.31 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 65.97 | 60.85 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 14.71 | 60.61 |
| TraesCS4A01G288300.1 | Wheat | plastid | 53.68 | 59.63 |
| TraesCS4D01G024100.1 | Wheat | plastid | 53.47 | 59.39 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 34.24 | 59.27 |
| Zm00001d032611_P002 | Maize | vacuole | 23.0 | 58.87 |
| OQU88608 | Sorghum | plastid | 54.1 | 58.46 |
| OQU91198 | Sorghum | nucleus | 45.59 | 58.41 |
| KRH25139 | Soybean | plastid | 58.93 | 58.38 |
| TraesCS5B01G468000.1 | Wheat | plastid | 53.36 | 58.19 |
| KRH30536 | Soybean | plastid | 54.1 | 57.87 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 50.95 | 57.53 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 44.43 | 57.09 |
| TraesCS3B01G287600.1 | Wheat | nucleus | 54.1 | 56.84 |
| Os03t0789466-00 | Rice | cytosol, mitochondrion, nucleus | 26.68 | 55.58 |
| TraesCS5B01G454200.1 | Wheat | cytosol | 39.08 | 55.11 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 41.39 | 54.95 |
| OQU91197 | Sorghum | plastid | 50.84 | 54.75 |
| Os03t0800200-01 | Rice | plasma membrane | 60.08 | 54.06 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 55.04 | 53.47 |
| Zm00001d025691_P001 | Maize | mitochondrion | 10.92 | 53.33 |
| TraesCS5B01G452500.1 | Wheat | nucleus | 51.05 | 53.29 |
| TraesCS5B01G451400.2 | Wheat | plastid | 58.82 | 52.83 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 58.4 | 52.8 |
| Zm00001d009158_P003 | Maize | golgi | 24.16 | 52.63 |
| Os03t0682600-00 | Rice | nucleus | 41.07 | 52.34 |
| TraesCS5B01G455700.1 | Wheat | cytosol, mitochondrion, plastid | 54.1 | 52.28 |
| Zm00001d036886_P001 | Maize | plastid | 12.39 | 52.21 |
| CDY41831 | Canola | nucleus | 57.25 | 52.2 |
| CDY68174 | Canola | nucleus | 57.56 | 52.09 |
| CDY22332 | Canola | plastid | 53.15 | 51.9 |
| CDX94724 | Canola | plastid | 53.26 | 51.68 |
| Solyc06g074730.2.1 | Tomato | nucleus | 54.73 | 51.53 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 55.88 | 51.3 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 55.88 | 51.3 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 54.2 | 51.19 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 54.83 | 50.93 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 10.82 | 50.49 |
| Zm00001d013063_P001 | Maize | nucleus | 53.36 | 50.3 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 55.88 | 48.99 |
| GSMUA_Achr4P17670_001 | Banana | extracellular, plasma membrane | 18.38 | 48.75 |
| Zm00001d013542_P003 | Maize | nucleus | 53.99 | 48.72 |
| Zm00001d007786_P001 | Maize | nucleus | 52.52 | 48.45 |
| Os07t0188000-01 | Rice | nucleus | 53.47 | 48.38 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 51.26 | 47.66 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 51.16 | 47.14 |
| GSMUA_Achr6P04510_001 | Banana | nucleus | 56.41 | 43.41 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 10.71 | 43.22 |
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 23.74 | 42.88 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 37.82 | 42.15 |
| CDY72062 | Canola | plastid | 13.13 | 42.09 |
| Zm00001d033518_P001 | Maize | nucleus | 52.31 | 41.95 |
| TraesCS5B01G458100.1 | Wheat | cytosol | 41.18 | 41.26 |
| Zm00001d039440_P001 | Maize | cytosol | 9.56 | 37.3 |
| CDX84712 | Canola | nucleus | 32.25 | 35.41 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 34.77 | 35.1 |
| CDX79495 | Canola | nucleus | 31.93 | 35.06 |
| CDX92417 | Canola | nucleus | 23.42 | 34.63 |
| CDY51501 | Canola | nucleus | 32.56 | 34.48 |
| Os02t0616300-00 | Rice | vacuole | 11.97 | 34.44 |
| CDY48192 | Canola | nucleus | 33.3 | 34.38 |
| CDX77061 | Canola | nucleus | 33.19 | 34.27 |
| CDY04475 | Canola | nucleus | 32.98 | 34.02 |
| CDY09103 | Canola | nucleus | 32.35 | 34.0 |
| CDY56413 | Canola | nucleus | 32.56 | 33.59 |
| CDX92406 | Canola | nucleus | 31.83 | 33.52 |
| CDX92405 | Canola | nucleus | 32.04 | 33.33 |
| CDY59516 | Canola | nucleus | 31.62 | 33.22 |
| CDY16587 | Canola | nucleus | 30.67 | 33.11 |
| CDY07349 | Canola | nucleus | 33.93 | 32.83 |
| CDY28550 | Canola | cytosol, plastid | 32.98 | 32.17 |
| CDY70429 | Canola | plastid | 29.1 | 31.23 |
| EER93271 | Sorghum | cytosol | 31.93 | 30.04 |
| CDY16595 | Canola | nucleus | 27.94 | 28.91 |
| Zm00001d035554_P001 | Maize | plastid | 15.23 | 28.83 |
| CDY02373 | Canola | nucleus | 30.78 | 28.64 |
| CDY25885 | Canola | cytosol | 29.94 | 28.22 |
| CDY55876 | Canola | cytosol | 30.57 | 28.12 |
| CDY62055 | Canola | nucleus | 13.13 | 21.7 |
| Os03t0789500-01 | Rice | cytosol | 0.53 | 2.2 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | GO:A0A078C3I2 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | EnsemblPlants:CDX71410 | ProteinID:CDX71410 | ProteinID:CDX71410.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00148237001 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 |
| PANTHER:PTHR22891 | PANTHER:PTHR22891:SF105 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 |
| SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0004EDADDE | SEG:seg | : |
Description
BnaC04g16450D
Coordinates
chrLK031793:-:626250..631469
Molecular Weight (calculated)
106033.0 Da
IEP (calculated)
10.062
GRAVY (calculated)
-0.428
Length
952 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRGGYGGA GRGGGGGRRS DQSSGPAAWP ALQSSGVRGG RGRGNAGRGN AAPVASSSSS PPSGAVSGKP KASGSSDSGS SLGQELAEKV QITTAPPSSS
101: KAVTFPVRPG FGKLGKKVTI RANHFLVQVA DRDLYHYDVS ITPEVISKKV NRDVMTTLVK TYGESHMAKK IPAYDGRKSL YTAGPLPFES KEFVVDLNGK
201: KPTASSKRDR KFKVAIKLAS RPDLHQLQEF LRRKQRDAPY ETIQVLDVVF RDLPSQKYVS VGRSFFDPSL GRRGELADGV EYWSGYFQSL RLTQMGLSLN
301: IDVSARSFYE PILVTEFIGK YLNLRDFSRP LRDSDRVKVK KALKSLKVEL AQFDFARSTK VSGISSCPIS ELRFTLEDNT QKTVVQYFAE KFNYRVKYPA
401: LPAIQSGSDS RPAYFPMEFC RIAEGQRYTK KLNERQVTAL LRATCQRPEI RENSIKGMVK NNKYNEIDLV RKEFGMSVTD QLATVEARVL PPPLLKYHES
501: GREKMVNPRL GQWNMIDKKM INGAKVASWT CVSFSTRIDR NLPQEFCKQL IDMCVSKGMQ FNPQPAIPFI SCQPQRIEEA LCDIHKRAPG LQMLIVILPD
601: VTGSYGKIKR ICETELGIVS QCCQPNQVRK LNKQYMENVA LKINVKTGGR NTVLDDAIRR RIPLISDRPT IIFGADVTHP QPGEDSSPSI AAVVASMDWP
701: EITKYRGLVS AQTHREEIIE DLYKLVQDPQ RGPVHSGMIR EHLIAFRRAT GQKPQRIIFY RDGVSEGQFS QVLLHEMIAI RKACASLEER YLPPVTFVVV
801: QKRHHTRLFP AQHGNRETTD KSGNIQPGTV VDTKICHPTE FDFYLNSHAG IQGTSRPAHY HVLVDENGFT ADALQMLTNN LCYTFARCTR SVSIVPPAYY
901: AHLAAFRARY YMESENSDGG SSRSRNTTAS TSAVVSLLPA TKDNVKDVMF YC
101: KAVTFPVRPG FGKLGKKVTI RANHFLVQVA DRDLYHYDVS ITPEVISKKV NRDVMTTLVK TYGESHMAKK IPAYDGRKSL YTAGPLPFES KEFVVDLNGK
201: KPTASSKRDR KFKVAIKLAS RPDLHQLQEF LRRKQRDAPY ETIQVLDVVF RDLPSQKYVS VGRSFFDPSL GRRGELADGV EYWSGYFQSL RLTQMGLSLN
301: IDVSARSFYE PILVTEFIGK YLNLRDFSRP LRDSDRVKVK KALKSLKVEL AQFDFARSTK VSGISSCPIS ELRFTLEDNT QKTVVQYFAE KFNYRVKYPA
401: LPAIQSGSDS RPAYFPMEFC RIAEGQRYTK KLNERQVTAL LRATCQRPEI RENSIKGMVK NNKYNEIDLV RKEFGMSVTD QLATVEARVL PPPLLKYHES
501: GREKMVNPRL GQWNMIDKKM INGAKVASWT CVSFSTRIDR NLPQEFCKQL IDMCVSKGMQ FNPQPAIPFI SCQPQRIEEA LCDIHKRAPG LQMLIVILPD
601: VTGSYGKIKR ICETELGIVS QCCQPNQVRK LNKQYMENVA LKINVKTGGR NTVLDDAIRR RIPLISDRPT IIFGADVTHP QPGEDSSPSI AAVVASMDWP
701: EITKYRGLVS AQTHREEIIE DLYKLVQDPQ RGPVHSGMIR EHLIAFRRAT GQKPQRIIFY RDGVSEGQFS QVLLHEMIAI RKACASLEER YLPPVTFVVV
801: QKRHHTRLFP AQHGNRETTD KSGNIQPGTV VDTKICHPTE FDFYLNSHAG IQGTSRPAHY HVLVDENGFT ADALQMLTNN LCYTFARCTR SVSIVPPAYY
901: AHLAAFRARY YMESENSDGG SSRSRNTTAS TSAVVSLLPA TKDNVKDVMF YC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.